RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 VCPKMTQ9H867 229 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 ANKZF1Q9H8Y5 726 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 PIH1D3Q9NQM4 214 aaKnown RBP7.73□□□□□ -1.17
KRT39-203ENST00000578078 KLC4Q9NSK0 619 aa7.73□□□□□ -1.17
KRT39-203ENST00000578078 CHCHD3Q9NX63 227 aaKnown RBP7.73□□□□□ -1.17
KRT39-203ENST00000578078 RTCBQ9Y3I0 505 aaKnown RBP7.73□□□□□ -1.17
KRT39-203ENST00000578078 AFF2P51816 1311 aa7.72□□□□□ -1.17
KRT39-203ENST00000578078 ZNF532Q9HCE3 1301 aa7.72□□□□□ -1.17
KRT39-203ENST00000578078 VWA3AA6NCI4 1184 aa7.72□□□□□ -1.17
KRT39-203ENST00000578078 HMGB1P1B2RPK0 211 aaPredicted RBP7.72□□□□□ -1.17
KRT39-203ENST00000578078 ABLIM1O14639 778 aa7.72□□□□□ -1.17
KRT39-203ENST00000578078 ZNF213O14771 459 aa7.72□□□□□ -1.17
KRT39-203ENST00000578078 PRC1O43663 620 aa7.72□□□□□ -1.17
KRT39-203ENST00000578078 PDE6AP16499 860 aa7.72□□□□□ -1.17
KRT39-203ENST00000578078 RHBDL3P58872 404 aa7.72□□□□□ -1.17
KRT39-203ENST00000578078 SKOR1P84550 965 aa7.72□□□□□ -1.17
KRT39-203ENST00000578078 EXOSC10Q01780 885 aaKnown RBP7.72□□□□□ -1.17
KRT39-203ENST00000578078 CHRNDQ07001 517 aa7.72□□□□□ -1.17
KRT39-203ENST00000578078 ARID5BQ14865 1188 aa7.72□□□□□ -1.17
KRT39-203ENST00000578078 FOXD4L6Q3SYB3 417 aaPredicted RBP7.72□□□□□ -1.17
KRT39-203ENST00000578078 FOXD4L3Q6VB84 417 aaPredicted RBP7.72□□□□□ -1.17
KRT39-203ENST00000578078 BICDL1Q6ZP65 573 aa7.72□□□□□ -1.17
KRT39-203ENST00000578078 RALYLQ86SE5 291 aaKnown RBP7.72□□□□□ -1.17
KRT39-203ENST00000578078 MFN1Q8IWA4 741 aa7.72□□□□□ -1.17
KRT39-203ENST00000578078 C1orf131Q8NDD1 294 aaKnown RBP7.72□□□□□ -1.17
KRT39-203ENST00000578078 ZFAND2BQ8WV99 257 aa7.72□□□□□ -1.17
KRT39-203ENST00000578078 LLPHQ9BRT6 129 aaKnown RBP7.72□□□□□ -1.17
KRT39-203ENST00000578078 NAA15Q9BXJ9 866 aaKnown RBP7.72□□□□□ -1.17
KRT39-203ENST00000578078 PUS7LQ9H0K6 701 aaKnown RBP7.72□□□□□ -1.17
KRT39-203ENST00000578078 SNTG2Q9NY99 539 aa7.72□□□□□ -1.17
KRT39-203ENST00000578078 TRPC5Q9UL62 973 aaPredicted RBP7.72□□□□□ -1.17
KRT39-203ENST00000578078 WDR19Q8NEZ3 1342 aa7.71□□□□□ -1.17
KRT39-203ENST00000578078 CCDC88AQ3V6T2 1871 aa7.71□□□□□ -1.17
KRT39-203ENST00000578078 GOLGA8KD6RF30 607 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 PFKFB2O60825 505 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 SSBP05455 408 aaKnown RBP eCLIP7.71□□□□□ -1.18
KRT39-203ENST00000578078 EPB41P11171 864 aaKnown RBP7.71□□□□□ -1.18
KRT39-203ENST00000578078 PAX7P23759 505 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 CD151P48509 253 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 IRAK1P51617 712 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 CLNS1AP54105 237 aaKnown RBP7.71□□□□□ -1.18
KRT39-203ENST00000578078 KCNQ4P56696 695 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 RASGRF1Q13972 1273 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 SNCBQ16143 134 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 CAMK4Q16566 473 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 ARSHQ5FYA8 562 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 SLC10A5Q5PT55 438 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 ODR4Q5SWX8 454 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 FBXW10Q5XX13 1052 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 TBC1D9BQ66K14 1250 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 CCDC73Q6ZRK6 1079 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 ARMC9Q7Z3E5 817 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 RBM12BQ8IXT5 1001 aaKnown RBP7.71□□□□□ -1.18
KRT39-203ENST00000578078 OR8K1Q8NGG5 319 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 NCOA7Q8NI08 942 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 AIDAQ96BJ3 306 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 DTNBP1Q96EV8 351 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 CSRNP1Q96S65 589 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 SH3GL2Q99962 352 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 MMTAG2Q9BU76 263 aaKnown RBP7.71□□□□□ -1.18
KRT39-203ENST00000578078 SEPT9Q9UHD8 586 aaPredicted RBP7.71□□□□□ -1.18
KRT39-203ENST00000578078 PPP2R2CQ9Y2T4 447 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 PCDHB11Q9Y5F2 797 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 CAPN7Q9Y6W3 813 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 MAST2Q6P0Q8 1798 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 TIAM2Q8IVF5 1701 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 UBR3Q6ZT12 1888 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 ZMYM6O95789 1325 aa7.71□□□□□ -1.18
KRT39-203ENST00000578078 NR1I2O75469 434 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 RTN3O95197 1032 aaPredicted RBP7.7□□□□□ -1.18
KRT39-203ENST00000578078 FGAP02671 866 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 GCKP35557 465 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 HAND2P61296 217 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 APBA1Q02410 837 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 FAM160A1Q05DH4 1040 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 ACTN3Q08043 901 aaPredicted RBP7.7□□□□□ -1.18
KRT39-203ENST00000578078 NFX1Q12986 1120 aaKnown RBP7.7□□□□□ -1.18
KRT39-203ENST00000578078 COL9A3Q14050 684 aaPredicted RBP7.7□□□□□ -1.18
KRT39-203ENST00000578078 UBE4AQ14139 1066 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 RASA3Q14644 834 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 KIAA0753Q2KHM9 967 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 CCDC40Q4G0X9 1142 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 COX20Q5RI15 118 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 TPTE2Q6XPS3 522 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 TSHZ1Q6ZSZ6 1077 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 C11orf57Q6ZUT1 292 aaPredicted RBP7.7□□□□□ -1.18
KRT39-203ENST00000578078 PTF1AQ7RTS3 328 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 SAMD7Q7Z3H4 446 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 FBXL16Q8N461 479 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 MAGEB6Q8N7X4 407 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 CCDC47Q96A33 483 aaKnown RBP7.7□□□□□ -1.18
KRT39-203ENST00000578078 ZNF274Q96GC6 653 aaPredicted RBP7.7□□□□□ -1.18
KRT39-203ENST00000578078 NLRP3Q96P20 1036 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 DEPDC7Q96QD5 511 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 CRACR2AQ9BSW2 395 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 LRRC2Q9BYS8 371 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 AGXT2Q9BYV1 514 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 FANCLQ9NW38 375 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 RPS6KL1Q9Y6S9 549 aa7.7□□□□□ -1.18
KRT39-203ENST00000578078 COL4A1P02462 1669 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms