RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 X6R8D5 127 aa7.84□□□□□ -1.15
SMCHD1-202ENST00000577300 MEFVO15553 781 aaPredicted RBP7.83□□□□□ -1.16
SMCHD1-202ENST00000577300 TBX1O43435 398 aa7.83□□□□□ -1.16
SMCHD1-202ENST00000577300 SMARCA5O60264 1052 aaPredicted RBP7.83□□□□□ -1.16
SMCHD1-202ENST00000577300 PLP2Q04941 152 aa7.83□□□□□ -1.16
SMCHD1-202ENST00000577300 EFEMP1Q12805 493 aa7.83□□□□□ -1.16
SMCHD1-202ENST00000577300 GNL2Q13823 731 aaKnown RBP7.83□□□□□ -1.16
SMCHD1-202ENST00000577300 UBXN11Q5T124 520 aa7.83□□□□□ -1.16
SMCHD1-202ENST00000577300 ACBD5Q5T8D3 534 aaPredicted RBP7.83□□□□□ -1.16
SMCHD1-202ENST00000577300 CCDC103Q8IW40 242 aa7.83□□□□□ -1.16
SMCHD1-202ENST00000577300 KREMEN2Q8NCW0 462 aa7.83□□□□□ -1.16
SMCHD1-202ENST00000577300 GORASP1Q9BQQ3 440 aa7.83□□□□□ -1.16
SMCHD1-202ENST00000577300 C11orf84Q9BUA3 381 aaPredicted RBP7.83□□□□□ -1.16
SMCHD1-202ENST00000577300 BDH2Q9BUT1 245 aa7.83□□□□□ -1.16
SMCHD1-202ENST00000577300 LRP2BPQ9P2M1 347 aa7.83□□□□□ -1.16
SMCHD1-202ENST00000577300 TMEFF2Q9UIK5 374 aaPredicted RBP7.83□□□□□ -1.16
SMCHD1-202ENST00000577300 B2RBV5 119 aa7.82□□□□□ -1.16
SMCHD1-202ENST00000577300 ARNTLO00327 626 aa7.82□□□□□ -1.16
SMCHD1-202ENST00000577300 SNRPB2P08579 225 aaKnown RBP7.82□□□□□ -1.16
SMCHD1-202ENST00000577300 FPR2P25090 351 aa7.82□□□□□ -1.16
SMCHD1-202ENST00000577300 GJA9P57773 515 aa7.82□□□□□ -1.16
SMCHD1-202ENST00000577300 KRTAP10-2P60368 255 aa7.82□□□□□ -1.16
SMCHD1-202ENST00000577300 NFKB2Q00653 900 aa7.82□□□□□ -1.16
SMCHD1-202ENST00000577300 FXNQ16595 210 aa7.82□□□□□ -1.16
SMCHD1-202ENST00000577300 DBX2Q6ZNG2 339 aa7.82□□□□□ -1.16
SMCHD1-202ENST00000577300 NLRP10Q86W26 655 aa7.82□□□□□ -1.16
SMCHD1-202ENST00000577300 ZNF761Q86XN6 746 aaPredicted RBP7.82□□□□□ -1.16
SMCHD1-202ENST00000577300 LNPKQ9C0E8 428 aa7.82□□□□□ -1.16
SMCHD1-202ENST00000577300 MYO1BO43795 1136 aa7.81□□□□□ -1.16
SMCHD1-202ENST00000577300 DDAH1O94760 285 aa7.81□□□□□ -1.16
SMCHD1-202ENST00000577300 ADRB1P08588 477 aa7.81□□□□□ -1.16
SMCHD1-202ENST00000577300 THBS2P35442 1172 aa7.81□□□□□ -1.16
SMCHD1-202ENST00000577300 ETFBP38117 255 aa7.81□□□□□ -1.16
SMCHD1-202ENST00000577300 ECI1P42126 302 aa7.81□□□□□ -1.16
SMCHD1-202ENST00000577300 SMAD4Q13485 552 aaKnown RBP7.81□□□□□ -1.16
SMCHD1-202ENST00000577300 SPATS1Q496A3 300 aa7.81□□□□□ -1.16
SMCHD1-202ENST00000577300 MRM1Q6IN84 353 aaKnown RBP7.81□□□□□ -1.16
SMCHD1-202ENST00000577300 CEP68Q76N32 757 aa7.81□□□□□ -1.16
SMCHD1-202ENST00000577300 FAM126BQ8IXS8 530 aa7.81□□□□□ -1.16
SMCHD1-202ENST00000577300 KYQ8NBH2 561 aa7.81□□□□□ -1.16
SMCHD1-202ENST00000577300 TRMT2BQ96GJ1 504 aaKnown RBP7.81□□□□□ -1.16
SMCHD1-202ENST00000577300 KRTAP4-5Q9BYR2 181 aa7.81□□□□□ -1.16
SMCHD1-202ENST00000577300 PALD1Q9ULE6 856 aa7.81□□□□□ -1.16
SMCHD1-202ENST00000577300 CAPNS1P04632 268 aa7.8□□□□□ -1.16
SMCHD1-202ENST00000577300 FGRP09769 529 aa7.8□□□□□ -1.16
SMCHD1-202ENST00000577300 RPL13P26373 211 aaKnown RBP7.8□□□□□ -1.16
SMCHD1-202ENST00000577300 BCL6P41182 706 aa7.8□□□□□ -1.16
SMCHD1-202ENST00000577300 GFRA1P56159 465 aa7.8□□□□□ -1.16
SMCHD1-202ENST00000577300 MILR1Q7Z6M3 343 aa7.8□□□□□ -1.16
SMCHD1-202ENST00000577300 FERMT3Q86UX7 667 aa7.8□□□□□ -1.16
SMCHD1-202ENST00000577300 ZC3H18Q86VM9 953 aaKnown RBP7.8□□□□□ -1.16
SMCHD1-202ENST00000577300 ADAMTS17Q8TE56 1095 aa7.8□□□□□ -1.16
SMCHD1-202ENST00000577300 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.8□□□□□ -1.164e-6■□□□□ 10.1
SMCHD1-202ENST00000577300 EPN3Q9H201 632 aa7.8□□□□□ -1.16
SMCHD1-202ENST00000577300 NGRNQ9NPE2 291 aaKnown RBP7.8□□□□□ -1.16
SMCHD1-202ENST00000577300 DUSP10Q9Y6W6 482 aa7.8□□□□□ -1.16
SMCHD1-202ENST00000577300 TCF3P15923 654 aa7.79□□□□□ -1.16
SMCHD1-202ENST00000577300 LTBRP36941 435 aa7.79□□□□□ -1.16
SMCHD1-202ENST00000577300 SF1Q15637 639 aaKnown RBP7.79□□□□□ -1.16
SMCHD1-202ENST00000577300 CD300LDQ6UXZ3 194 aa7.79□□□□□ -1.16
SMCHD1-202ENST00000577300 FAM26EQ8N5C1 309 aa7.79□□□□□ -1.16
SMCHD1-202ENST00000577300 TTLL6Q8N841 843 aa7.79□□□□□ -1.16
SMCHD1-202ENST00000577300 RCBTB1Q8NDN9 531 aa7.79□□□□□ -1.16
SMCHD1-202ENST00000577300 MICAL1Q8TDZ2 1067 aa7.79□□□□□ -1.16
SMCHD1-202ENST00000577300 TMEM169Q96HH4 297 aa7.79□□□□□ -1.16
SMCHD1-202ENST00000577300 JAG2Q9Y219 1238 aa7.79□□□□□ -1.16
SMCHD1-202ENST00000577300 ZNF652Q9Y2D9 606 aa7.79□□□□□ -1.16
SMCHD1-202ENST00000577300 H7BY64 318 aa7.78□□□□□ -1.16
SMCHD1-202ENST00000577300 CNR2P34972 360 aa7.78□□□□□ -1.16
SMCHD1-202ENST00000577300 PRSS53Q2L4Q9 553 aa7.78□□□□□ -1.16
SMCHD1-202ENST00000577300 PPIL6Q8IXY8 311 aa7.78□□□□□ -1.16
SMCHD1-202ENST00000577300 C1orf159Q96HA4 380 aa7.78□□□□□ -1.16
SMCHD1-202ENST00000577300 ZNF408Q9H9D4 720 aa7.78□□□□□ -1.16
SMCHD1-202ENST00000577300 FBXL7Q9UJT9 491 aa7.78□□□□□ -1.16
SMCHD1-202ENST00000577300 COA3Q9Y2R0 106 aaPredicted RBP7.78□□□□□ -1.16
SMCHD1-202ENST00000577300 KCNJ6P48051 423 aa7.77□□□□□ -1.17
SMCHD1-202ENST00000577300 ITGA1P56199 1179 aa7.77□□□□□ -1.17
SMCHD1-202ENST00000577300 LSAMPQ13449 338 aa7.77□□□□□ -1.17
SMCHD1-202ENST00000577300 CHRNA2Q15822 529 aa7.77□□□□□ -1.17
SMCHD1-202ENST00000577300 FAM26FQ5R3K3 315 aa7.77□□□□□ -1.17
SMCHD1-202ENST00000577300 PRR31Q5SQ13 230 aa7.77□□□□□ -1.17
SMCHD1-202ENST00000577300 DENND5AQ6IQ26 1287 aa7.77□□□□□ -1.17
SMCHD1-202ENST00000577300 EEPD1Q7L9B9 569 aa7.77□□□□□ -1.17
SMCHD1-202ENST00000577300 TMEM145Q8NBT3 493 aa7.77□□□□□ -1.17
SMCHD1-202ENST00000577300 DDX1Q92499 740 aaKnown RBP7.77□□□□□ -1.17
SMCHD1-202ENST00000577300 BORCS6Q96GS4 357 aa7.77□□□□□ -1.17
SMCHD1-202ENST00000577300 SYT3Q9BQG1 590 aa7.77□□□□□ -1.17
SMCHD1-202ENST00000577300 TINF2Q9BSI4 451 aa7.77□□□□□ -1.17
SMCHD1-202ENST00000577300 K7ESM1 405 aa7.76□□□□□ -1.17
SMCHD1-202ENST00000577300 GJB6O95452 261 aa7.76□□□□□ -1.17
SMCHD1-202ENST00000577300 ARID5AQ03989 594 aa7.76□□□□□ -1.17
SMCHD1-202ENST00000577300 CR1LQ2VPA4 569 aa7.76□□□□□ -1.17
SMCHD1-202ENST00000577300 EMC4Q5J8M3 183 aa7.76□□□□□ -1.17
SMCHD1-202ENST00000577300 SLC35F1Q5T1Q4 408 aa7.76□□□□□ -1.17
SMCHD1-202ENST00000577300 NPFFR2Q9Y5X5 522 aa7.76□□□□□ -1.17
SMCHD1-202ENST00000577300 AGRPO00253 132 aa7.75□□□□□ -1.17
SMCHD1-202ENST00000577300 HGSO14964 777 aaPredicted RBP7.75□□□□□ -1.17
SMCHD1-202ENST00000577300 LCP1P13796 627 aa7.75□□□□□ -1.17
SMCHD1-202ENST00000577300 SLC10A6Q3KNW5 377 aa7.75□□□□□ -1.17
SMCHD1-202ENST00000577300 MCF2L2Q86YR7 1114 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms