RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 NR2F2P24468 414 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 MCAMP43121 646 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 PSMD1Q99460 953 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 NYXQ9GZU5 481 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 ATP8A2Q9NTI2 1148 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 TRIM10Q9UDY6 481 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 SUFUQ9UMX1 484 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 NEDD4P46934 1319 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 ADGRL3Q9HAR2 1447 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 FERP16591 822 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 MYO1EQ12965 1108 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 LRRC8CQ8TDW0 803 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 TGFBRAP1Q8WUH2 860 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 CCT8L2Q96SF2 557 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 USTQ9Y2C2 406 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 ITIH6Q6UXX5 1313 aa14.32□□□□□ -0.12
PCDHGB3-201ENST00000576222 PLEKHA8P1O95397 391 aa14.31□□□□□ -0.12
PCDHGB3-201ENST00000576222 LMNB1P20700 586 aa14.31□□□□□ -0.12
PCDHGB3-201ENST00000576222 CFAP157Q5JU67 520 aa14.31□□□□□ -0.12
PCDHGB3-201ENST00000576222 RSRC2Q7L4I2 434 aaKnown RBP14.31□□□□□ -0.12
PCDHGB3-201ENST00000576222 KSR1Q8IVT5 923 aa14.31□□□□□ -0.12
PCDHGB3-201ENST00000576222 GBP7Q8N8V2 638 aaPredicted RBP14.31□□□□□ -0.12
PCDHGB3-201ENST00000576222 STK17AQ9UEE5 414 aa14.31□□□□□ -0.12
PCDHGB3-201ENST00000576222 PTPN22Q9Y2R2 807 aa14.31□□□□□ -0.12
PCDHGB3-201ENST00000576222 C6orf118Q5T5N4 469 aa14.31□□□□□ -0.12
PCDHGB3-201ENST00000576222 GRK7Q8WTQ7 553 aa14.31□□□□□ -0.12
PCDHGB3-201ENST00000576222 ZBTB21Q9ULJ3 1066 aa14.31□□□□□ -0.12
PCDHGB3-201ENST00000576222 AGTPBP1Q9UPW5 1226 aa14.31□□□□□ -0.12
PCDHGB3-201ENST00000576222 ARHGEF35A5YM69 484 aa14.31□□□□□ -0.12
PCDHGB3-201ENST00000576222 LRRC53A6NM62 1247 aa14.31□□□□□ -0.12
PCDHGB3-201ENST00000576222 I3L4J1 428 aa14.31□□□□□ -0.12
PCDHGB3-201ENST00000576222 CYP2J2P51589 502 aa14.31□□□□□ -0.12
PCDHGB3-201ENST00000576222 DRP2Q13474 957 aa14.31□□□□□ -0.12
PCDHGB3-201ENST00000576222 WDR44Q5JSH3 913 aa14.31□□□□□ -0.12
PCDHGB3-201ENST00000576222 ALKBH5Q6P6C2 394 aaKnown RBP14.31□□□□□ -0.12
PCDHGB3-201ENST00000576222 KRT26Q7Z3Y9 468 aa14.31□□□□□ -0.12
PCDHGB3-201ENST00000576222 ZNF473Q8WTR7 871 aaKnown RBP14.31□□□□□ -0.12
PCDHGB3-201ENST00000576222 EYA3Q99504 573 aa14.31□□□□□ -0.12
PCDHGB3-201ENST00000576222 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.31□□□□□ -0.12
PCDHGB3-201ENST00000576222 EVI5O60447 810 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 GYPCP04921 128 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 MDH1P40925 334 aaKnown RBP14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 LRRC63Q05C16 580 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 NUGGCQ68CJ6 796 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 RUBCNQ92622 972 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 TXNDC16Q9P2K2 825 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 SASH3O75995 380 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 ELF1P32519 619 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 TRIM65Q6PJ69 517 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 ARHGEF18Q6ZSZ5 1173 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 SGMS1Q86VZ5 419 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 IQGAP1P46940 1657 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 HSPA1LP34931 641 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 ADCY1Q08828 1119 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 MAP7Q14244 749 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 MESDQ14696 234 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 PAF1Q8N7H5 531 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 RAB3IL1Q8TBN0 382 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 TAF1DQ9H5J8 278 aaPredicted RBP14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 POLD4Q9HCU8 107 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 TXLNGQ9NUQ3 528 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 PSMD14O00487 310 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 ZRANB2O95218 330 aaKnown RBP eCLIP14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 BAG2O95816 211 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 PDE6CP51160 858 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 SH3BGRP55822 239 aaPredicted RBP14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 DR1Q01658 176 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 GFPT1Q06210 699 aaPredicted RBP14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 SLC20A2Q08357 652 aa14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 APBB1IPQ7Z5R6 666 aaPredicted RBP14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 LARSQ9P2J5 1176 aaKnown RBP14.3□□□□□ -0.12
PCDHGB3-201ENST00000576222 TRIM37O94972 964 aa14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 ATF2P15336 505 aa14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 ADCY2Q08462 1091 aa14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 YY1AP1Q9H869 796 aa14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 GEMIN8Q9NWZ8 242 aaKnown RBP14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 AFPP02771 609 aaKnown RBP14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 ST3GAL1Q11201 340 aa14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 NCAPHQ15003 741 aa14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 WDR93Q6P2C0 686 aa14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 SDCCAG8Q86SQ7 713 aaPredicted RBP14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 CFAP61Q8NHU2 1237 aa14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 GJA10Q969M2 543 aa14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 TCHPQ9BT92 498 aa14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 KIAA1024Q9UPX6 916 aa14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 LRRIQ3A6PVS8 624 aaPredicted RBP14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 HSPA6P17066 643 aa14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 LSP1P33241 339 aa14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 MAEAQ7L5Y9 396 aa14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 ANKRD35Q8N283 1001 aa14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 DDX25Q9UHL0 483 aaKnown RBP14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 PALLDQ8WX93 1383 aa14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 KIF3CO14782 793 aa14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 IFNB1P01574 187 aa14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 CAPN12Q6ZSI9 719 aa14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 FNBP1Q96RU3 617 aa14.29□□□□□ -0.12
PCDHGB3-201ENST00000576222 OPHN1O60890 802 aa14.28□□□□□ -0.12
PCDHGB3-201ENST00000576222 FGGP02679 453 aa14.28□□□□□ -0.12
PCDHGB3-201ENST00000576222 USP49Q70CQ1 688 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms