RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 TMEM106CQ9BVX2 250 aa9.07□□□□□ -0.96
CCDC40-215ENST00000576033 ANO3Q9BYT9 981 aa9.07□□□□□ -0.96
CCDC40-215ENST00000576033 XPNPEP3Q9NQH7 507 aa9.07□□□□□ -0.96
CCDC40-215ENST00000576033 ADD3Q9UEY8 706 aaKnown RBP9.07□□□□□ -0.96
CCDC40-215ENST00000576033 CNPY2Q9Y2B0 182 aa9.07□□□□□ -0.96
CCDC40-215ENST00000576033 PIK3CDO00329 1044 aa9.06□□□□□ -0.96
CCDC40-215ENST00000576033 DEXIO95424 95 aa9.06□□□□□ -0.96
CCDC40-215ENST00000576033 AKR1A1P14550 325 aa9.06□□□□□ -0.96
CCDC40-215ENST00000576033 UBA1P22314 1058 aaKnown RBP9.06□□□□□ -0.96
CCDC40-215ENST00000576033 AKAP17AQ02040 695 aaKnown RBP9.06□□□□□ -0.96
CCDC40-215ENST00000576033 NR5A1Q13285 461 aa9.06□□□□□ -0.96
CCDC40-215ENST00000576033 LRRC41Q15345 812 aa9.06□□□□□ -0.96
CCDC40-215ENST00000576033 UBE2Q1Q7Z7E8 422 aa9.06□□□□□ -0.96
CCDC40-215ENST00000576033 TRIM22Q8IYM9 498 aa9.06□□□□□ -0.96
CCDC40-215ENST00000576033 NSUN6Q8TEA1 469 aaKnown RBP9.06□□□□□ -0.96
CCDC40-215ENST00000576033 GJA10Q969M2 543 aa9.06□□□□□ -0.96
CCDC40-215ENST00000576033 FERMT2Q96AC1 680 aa9.06□□□□□ -0.96
CCDC40-215ENST00000576033 PAWRQ96IZ0 340 aaKnown RBP9.06□□□□□ -0.96
CCDC40-215ENST00000576033 PHF20Q9BVI0 1012 aa9.06□□□□□ -0.96
CCDC40-215ENST00000576033 WDR11Q9BZH6 1224 aa9.06□□□□□ -0.96
CCDC40-215ENST00000576033 ZMYND12Q9H0C1 365 aa9.06□□□□□ -0.96
CCDC40-215ENST00000576033 ABHD16BQ9H3Z7 469 aa9.06□□□□□ -0.96
CCDC40-215ENST00000576033 OGDHLQ9ULD0 1010 aa9.06□□□□□ -0.96
CCDC40-215ENST00000576033 CIZ1Q9ULV3 898 aaPredicted RBP9.06□□□□□ -0.96
CCDC40-215ENST00000576033 GNEQ9Y223 722 aaKnown RBP9.06□□□□□ -0.96
CCDC40-215ENST00000576033 ESYT2A0FGR8 921 aa9.05□□□□□ -0.96
CCDC40-215ENST00000576033 SPDYE3A6NKU9 549 aa9.05□□□□□ -0.96
CCDC40-215ENST00000576033 KIF28PB7ZC32 967 aa9.05□□□□□ -0.96
CCDC40-215ENST00000576033 M0R2N6 131 aa9.05□□□□□ -0.96
CCDC40-215ENST00000576033 ST18O60284 1047 aa9.05□□□□□ -0.96
CCDC40-215ENST00000576033 FARP2O94887 1054 aaPredicted RBP9.05□□□□□ -0.96
CCDC40-215ENST00000576033 RARBP10826 455 aa9.05□□□□□ -0.96
CCDC40-215ENST00000576033 ITGB5P18084 799 aa9.05□□□□□ -0.96
CCDC40-215ENST00000576033 CCND2P30279 289 aa9.05□□□□□ -0.96
CCDC40-215ENST00000576033 MCM2P49736 904 aa9.05□□□□□ -0.96
CCDC40-215ENST00000576033 ATN1P54259 1190 aaPredicted RBP9.05□□□□□ -0.96
CCDC40-215ENST00000576033 NLRP5P59047 1200 aa9.05□□□□□ -0.96
CCDC40-215ENST00000576033 SP4Q02446 784 aa9.05□□□□□ -0.96
CCDC40-215ENST00000576033 TNFAIP2Q03169 654 aa9.05□□□□□ -0.96
CCDC40-215ENST00000576033 PPP2R5BQ15173 497 aa9.05□□□□□ -0.96
CCDC40-215ENST00000576033 CCDC62Q6P9F0 684 aa9.05□□□□□ -0.96
CCDC40-215ENST00000576033 TLK2Q86UE8 772 aa9.05□□□□□ -0.96
CCDC40-215ENST00000576033 VSIG10LQ86VR7 867 aa9.05□□□□□ -0.96
CCDC40-215ENST00000576033 REXO1Q8N1G1 1221 aaKnown RBP9.05□□□□□ -0.96
CCDC40-215ENST00000576033 MSL3Q8N5Y2 521 aaKnown RBP9.05□□□□□ -0.96
CCDC40-215ENST00000576033 VTA1Q9NP79 307 aa9.05□□□□□ -0.96
CCDC40-215ENST00000576033 PNMA2Q9UL42 364 aa9.05□□□□□ -0.96
CCDC40-215ENST00000576033 FAM184BQ9ULE4 1060 aa9.05□□□□□ -0.96
CCDC40-215ENST00000576033 LAMA3Q16787 3333 aa9.05□□□□□ -0.96
CCDC40-215ENST00000576033 LTBP2Q14767 1821 aa9.05□□□□□ -0.96
CCDC40-215ENST00000576033 CEP290O15078 2479 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 WDR81Q562E7 1941 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 RBM47A0AV96 593 aaKnown RBP9.04□□□□□ -0.96
CCDC40-215ENST00000576033 FAM86B1E9PN63 330 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 hCG_1984214I3L0E3 225 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 DYNC1LI2O43237 492 aaPredicted RBP9.04□□□□□ -0.96
CCDC40-215ENST00000576033 ATP9AO75110 1047 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 CDKL5O76039 1030 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 TDP2O95551 362 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 FAM86B2P0C5J1 330 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 C6orf222P0C671 652 aaPredicted RBP9.04□□□□□ -0.96
CCDC40-215ENST00000576033 ZNF286BP0CG31 522 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 ARP10275 920 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 TXNP10599 105 aaKnown RBP9.04□□□□□ -0.96
CCDC40-215ENST00000576033 SREBF1P36956 1147 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 PSMC6P62333 389 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 ARHGAP1Q07960 439 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 CUL4AQ13619 759 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 STXBP2Q15833 593 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 IFFO2Q5TF58 517 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 PCNX4Q63HM2 1172 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 KRT40Q6A162 431 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 CCSAPQ6IQ19 270 aaPredicted RBP9.04□□□□□ -0.96
CCDC40-215ENST00000576033 CPLX2Q6PUV4 134 aaKnown RBP9.04□□□□□ -0.96
CCDC40-215ENST00000576033 ZNF713Q8N859 430 aaPredicted RBP9.04□□□□□ -0.96
CCDC40-215ENST00000576033 SPRYD3Q8NCJ5 442 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 OR6J1Q8NGC5 347 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 CRYGNQ8WXF5 182 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 TNFRSF25Q93038 417 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 CHMP5Q9NZZ3 219 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 PCDHA4Q9UN74 947 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 MRVI1Q9Y6F6 885 aa9.04□□□□□ -0.96
CCDC40-215ENST00000576033 MYH15Q9Y2K3 1946 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 IGLV3-22A0A075B6J6 115 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 BTBD18B2RXH4 712 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 DDX39AO00148 427 aaKnown RBP9.03□□□□□ -0.96
CCDC40-215ENST00000576033 SLC37A4O43826 429 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 GGPS1O95749 300 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 COL6A1P12109 1028 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 GJB2P29033 226 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 MRPL12P52815 198 aaKnown RBP9.03□□□□□ -0.96
CCDC40-215ENST00000576033 GJA9P57773 515 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 ARHGAP4P98171 946 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 ITGB3BPQ13352 177 aaPredicted RBP9.03□□□□□ -0.96
CCDC40-215ENST00000576033 NBR1Q14596 966 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 KCNA10Q16322 511 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 INF2Q27J81 1249 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 LRRC26Q2I0M4 334 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 DUSP28Q4G0W2 176 aa9.03□□□□□ -0.96
CCDC40-215ENST00000576033 CXCL17Q6UXB2 119 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms