RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 PARP1P09874 1014 aaKnown RBP10.57□□□□□ -0.72
CCDC40-212ENST00000574799 UBE4AQ14139 1066 aa10.57□□□□□ -0.72
CCDC40-212ENST00000574799 CAPRIN2Q6IMN6 1127 aaKnown RBP10.57□□□□□ -0.72
CCDC40-212ENST00000574799 KRT26Q7Z3Y9 468 aa10.57□□□□□ -0.72
CCDC40-212ENST00000574799 KRT12Q99456 494 aa10.57□□□□□ -0.72
CCDC40-212ENST00000574799 SH3GL3Q99963 347 aa10.57□□□□□ -0.72
CCDC40-212ENST00000574799 MLXIPQ9HAP2 919 aa10.57□□□□□ -0.72
CCDC40-212ENST00000574799 GREB1LQ9C091 1923 aaPredicted RBP10.57□□□□□ -0.72
CCDC40-212ENST00000574799 TULP1O00294 542 aaPredicted RBP10.57□□□□□ -0.72
CCDC40-212ENST00000574799 FAM107AO95990 144 aa10.57□□□□□ -0.72
CCDC40-212ENST00000574799 IGHMBP2P38935 993 aaKnown RBP10.57□□□□□ -0.72
CCDC40-212ENST00000574799 KRT71Q3SY84 523 aa10.57□□□□□ -0.72
CCDC40-212ENST00000574799 NSMCE1Q8WV22 266 aa10.57□□□□□ -0.72
CCDC40-212ENST00000574799 HVCN1Q96D96 273 aa10.57□□□□□ -0.72
CCDC40-212ENST00000574799 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.57□□□□□ -0.72
CCDC40-212ENST00000574799 LUC7LQ9NQ29 371 aaKnown RBP10.57□□□□□ -0.72
CCDC40-212ENST00000574799 IRAK4Q9NWZ3 460 aa10.57□□□□□ -0.72
CCDC40-212ENST00000574799 ANAPC4Q9UJX5 808 aa10.57□□□□□ -0.72
CCDC40-212ENST00000574799 PLAAQ9Y263 795 aa10.57□□□□□ -0.72
CCDC40-212ENST00000574799 MYH1P12882 1939 aa10.57□□□□□ -0.72
CCDC40-212ENST00000574799 ADAMTS3O15072 1205 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 NCK2O43639 380 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 C21orf2O43822 256 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 VIMP08670 466 aaKnown RBP10.56□□□□□ -0.72
CCDC40-212ENST00000574799 STAT6P42226 847 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 CRY2Q49AN0 593 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 TRIM68Q6AZZ1 485 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 SEPT12Q8IYM1 358 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 FUKQ8N0W3 1084 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 AENQ8WTP8 325 aaKnown RBP10.56□□□□□ -0.72
CCDC40-212ENST00000574799 TBC1D22AQ8WUA7 517 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 ATP6V1G3Q96LB4 118 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 MAP3K14Q99558 947 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 FBXO2Q9UK22 296 aaPredicted RBP10.56□□□□□ -0.72
CCDC40-212ENST00000574799 ZNF652Q9Y2D9 606 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 STK38LQ9Y2H1 464 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 ANO9A1A5B4 782 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 RNF225M0QZC1 329 aaPredicted RBP10.56□□□□□ -0.72
CCDC40-212ENST00000574799 SEMA3EO15041 775 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 GYS1P13807 737 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 CDC25CP30307 473 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 CARSP49589 748 aaKnown RBP10.56□□□□□ -0.72
CCDC40-212ENST00000574799 FUT2Q10981 343 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 PAPD7Q5XG87 772 aaKnown RBP10.56□□□□□ -0.72
CCDC40-212ENST00000574799 RUFY4Q6ZNE9 571 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 SPAG5Q96R06 1193 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 SH3GL2Q99962 352 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 SNX12Q9UMY4 172 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 SRPRBQ9Y5M8 271 aaKnown RBP10.56□□□□□ -0.72
CCDC40-212ENST00000574799 SCN9AQ15858 1988 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 PDS5AQ29RF7 1337 aaKnown RBP10.56□□□□□ -0.72
CCDC40-212ENST00000574799 HMGB1P1B2RPK0 211 aaPredicted RBP10.56□□□□□ -0.72
CCDC40-212ENST00000574799 TMOD1P28289 359 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 CCNHP51946 323 aaPredicted RBP10.56□□□□□ -0.72
CCDC40-212ENST00000574799 WTAPQ15007 396 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 FAM133BQ5BKY9 247 aaKnown RBP10.56□□□□□ -0.72
CCDC40-212ENST00000574799 FAM196AQ6ZSG2 479 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 CSGALNACT2Q8N6G5 542 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 FAM207AQ9NSI2 230 aaPredicted RBP10.56□□□□□ -0.72
CCDC40-212ENST00000574799 SAMD15Q9P1V8 674 aa10.56□□□□□ -0.72
CCDC40-212ENST00000574799 CCDC189A1A4V9 331 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 TRIM49BA6NDI0 452 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 PRDX5P30044 214 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 FNTAP49354 379 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 SKOR1P84550 965 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 CCDC170Q8IYT3 715 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 OSBPL9Q96SU4 736 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 FAM167BQ9BTA0 163 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 NOC4LQ9BVI4 516 aaKnown RBP10.55□□□□□ -0.72
CCDC40-212ENST00000574799 GDAQ9Y2T3 454 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 OPLAHO14841 1288 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 ACTN4O43707 911 aaKnown RBP10.55□□□□□ -0.72
CCDC40-212ENST00000574799 MMP1P03956 469 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 KIF5BP33176 963 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 MCM7P33993 719 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 TNNC1P63316 161 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 ARID5AQ03989 594 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 MB21D1Q8N884 522 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 CERKQ8TCT0 537 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 GPR101Q96P66 508 aaPredicted RBP10.55□□□□□ -0.72
CCDC40-212ENST00000574799 TFCP2L1Q9NZI6 479 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 NOVA2Q9UNW9 492 aaKnown RBP10.55□□□□□ -0.72
CCDC40-212ENST00000574799 ITIH6Q6UXX5 1313 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 HERVK_113P62684 666 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 MECOMQ03112 1051 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 DRP2Q13474 957 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 PTPROQ16827 1216 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 AKNAD1Q5T1N1 836 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 PRR5LQ6MZQ0 368 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 KDM7AQ6ZMT4 941 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 TMEM87BQ96K49 555 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 NOX5Q96PH1 765 aa10.55□□□□□ -0.72
CCDC40-212ENST00000574799 DNM2P50570 870 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 RPS8P62241 208 aaKnown RBP10.54□□□□□ -0.72
CCDC40-212ENST00000574799 MDM2Q00987 491 aaPredicted RBP10.54□□□□□ -0.72
CCDC40-212ENST00000574799 PLCB4Q15147 1175 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 NBPF9Q3BBW0 867 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 MED15Q96RN5 788 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 NOD2Q9HC29 1040 aa10.54□□□□□ -0.72
CCDC40-212ENST00000574799 AGPAT5Q9NUQ2 364 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms