RNA–Protein interactions for RNA: ENST00000574701.5

LITAF-213, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-213ENST00000574701 LRRC41Q15345 812 aa27.83■■■□□ 2.05
LITAF-213ENST00000574701 DUSP28Q4G0W2 176 aa27.83■■■□□ 2.05
LITAF-213ENST00000574701 UBE2Q1Q7Z7E8 422 aa27.83■■■□□ 2.05
LITAF-213ENST00000574701 VSIG10LQ86VR7 867 aa27.83■■■□□ 2.05
LITAF-213ENST00000574701 BICD2Q8TD16 824 aa27.83■■■□□ 2.05
LITAF-213ENST00000574701 AP5M1Q9H0R1 490 aa27.83■■■□□ 2.05
LITAF-213ENST00000574701 PCDHA6Q9UN73 950 aa27.83■■■□□ 2.05
LITAF-213ENST00000574701 PCDHA8Q9Y5H6 950 aa27.83■■■□□ 2.05
LITAF-213ENST00000574701 ADAMTS4O75173 837 aa27.82■■■□□ 2.04
LITAF-213ENST00000574701 C6orf222P0C671 652 aaPredicted RBP27.82■■■□□ 2.04
LITAF-213ENST00000574701 XRRA1Q6P2D8 792 aa27.82■■■□□ 2.04
LITAF-213ENST00000574701 WASF1Q92558 559 aa27.82■■■□□ 2.04
LITAF-213ENST00000574701 HTATIP2Q9BUP3 242 aa27.82■■■□□ 2.04
LITAF-213ENST00000574701 UPF3AQ9H1J1 476 aaKnown RBP27.82■■■□□ 2.04
LITAF-213ENST00000574701 GNEQ9Y223 722 aaKnown RBP27.82■■■□□ 2.04
LITAF-213ENST00000574701 Q9Y3F1 56 aa27.82■■■□□ 2.04
LITAF-213ENST00000574701 XBP1P17861 261 aa27.81■■■□□ 2.04
LITAF-213ENST00000574701 MNX1P50219 401 aaPredicted RBP27.81■■■□□ 2.04
LITAF-213ENST00000574701 GJA9P57773 515 aa27.81■■■□□ 2.04
LITAF-213ENST00000574701 NLRP5P59047 1200 aa27.81■■■□□ 2.04
LITAF-213ENST00000574701 GNPTABQ3T906 1256 aa27.81■■■□□ 2.04
LITAF-213ENST00000574701 PCNX4Q63HM2 1172 aa27.81■■■□□ 2.04
LITAF-213ENST00000574701 MCTP2Q6DN12 878 aa27.81■■■□□ 2.04
LITAF-213ENST00000574701 ANO3Q9BYT9 981 aa27.81■■■□□ 2.04
LITAF-213ENST00000574701 ORC3Q9UBD5 711 aaPredicted RBP27.81■■■□□ 2.04
LITAF-213ENST00000574701 MRVI1Q9Y6F6 885 aa27.81■■■□□ 2.04
LITAF-213ENST00000574701 CTDNEP1O95476 244 aa27.8■■■□□ 2.04
LITAF-213ENST00000574701 TXNP10599 105 aaKnown RBP27.8■■■□□ 2.04
LITAF-213ENST00000574701 CCDC83Q8IWF9 413 aa27.8■■■□□ 2.04
LITAF-213ENST00000574701 FAM177A1Q8N128 213 aaPredicted RBP27.8■■■□□ 2.04
LITAF-213ENST00000574701 REXO1Q8N1G1 1221 aaKnown RBP27.8■■■□□ 2.04
LITAF-213ENST00000574701 DYNC1LI2O43237 492 aaPredicted RBP27.79■■■□□ 2.04
LITAF-213ENST00000574701 CST5P28325 142 aaPredicted RBP27.79■■■□□ 2.04
LITAF-213ENST00000574701 CLK2P49760 499 aaKnown RBP27.79■■■□□ 2.04
LITAF-213ENST00000574701 KCNV1Q6PIU1 500 aa27.79■■■□□ 2.04
LITAF-213ENST00000574701 PCSK9Q8NBP7 692 aaKnown RBP27.79■■■□□ 2.04
LITAF-213ENST00000574701 NSUN7Q8NE18 718 aaKnown RBP27.79■■■□□ 2.04
LITAF-213ENST00000574701 OR6J1Q8NGC5 347 aa27.79■■■□□ 2.04
LITAF-213ENST00000574701 MCM2P49736 904 aa27.78■■■□□ 2.04
LITAF-213ENST00000574701 JAKMIP3Q5VZ66 844 aa27.78■■■□□ 2.04
LITAF-213ENST00000574701 KLHDC9Q8NEP7 349 aa27.78■■■□□ 2.04
LITAF-213ENST00000574701 PGBD1Q96JS3 809 aa27.78■■■□□ 2.04
LITAF-213ENST00000574701 TSEN34Q9BSV6 310 aaKnown RBP27.78■■■□□ 2.04
LITAF-213ENST00000574701 TMEM260Q9NX78 707 aa27.78■■■□□ 2.04
LITAF-213ENST00000574701 MYADML2A6NDP7 307 aa27.77■■■□□ 2.04
LITAF-213ENST00000574701 ZEB2O60315 1214 aa27.77■■■□□ 2.04
LITAF-213ENST00000574701 ARIH2O95376 493 aa27.77■■■□□ 2.04
LITAF-213ENST00000574701 COL6A1P12109 1028 aa27.77■■■□□ 2.04
LITAF-213ENST00000574701 NLRX1Q86UT6 975 aa27.77■■■□□ 2.04
LITAF-213ENST00000574701 AIFM3Q96NN9 605 aa27.77■■■□□ 2.04
LITAF-213ENST00000574701 SENP6Q9GZR1 1112 aaPredicted RBP27.77■■■□□ 2.04
LITAF-213ENST00000574701 MOXD2PA6NHM9 499 aa27.76■■■□□ 2.03
LITAF-213ENST00000574701 GH1P01241 217 aa27.76■■■□□ 2.03
LITAF-213ENST00000574701 NKX3-2P78367 333 aa27.76■■■□□ 2.03
LITAF-213ENST00000574701 MRPS9P82933 396 aaKnown RBP27.76■■■□□ 2.03
LITAF-213ENST00000574701 ST3GAL1Q11201 340 aa27.76■■■□□ 2.03
LITAF-213ENST00000574701 FSCN1Q16658 493 aaKnown RBP27.76■■■□□ 2.03
LITAF-213ENST00000574701 BRDTQ58F21 947 aaPredicted RBP27.76■■■□□ 2.03
LITAF-213ENST00000574701 GNASQ5JWF2 1037 aa27.76■■■□□ 2.03
LITAF-213ENST00000574701 TMEM63BQ5T3F8 832 aa27.76■■■□□ 2.03
LITAF-213ENST00000574701 GALNT17Q6IS24 598 aa27.76■■■□□ 2.03
LITAF-213ENST00000574701 ZFP91Q96JP5 570 aaPredicted RBP27.76■■■□□ 2.03
LITAF-213ENST00000574701 ALG1Q9BT22 464 aa27.76■■■□□ 2.03
LITAF-213ENST00000574701 RTEL1Q9NZ71 1219 aa27.76■■■□□ 2.03
LITAF-213ENST00000574701 PCDHA4Q9UN74 947 aa27.76■■■□□ 2.03
LITAF-213ENST00000574701 PHF24Q9UPV7 400 aa27.76■■■□□ 2.03
LITAF-213ENST00000574701 CPT1AP50416 773 aa27.75■■■□□ 2.03
LITAF-213ENST00000574701 LY6KQ17RY6 165 aa27.75■■■□□ 2.03
LITAF-213ENST00000574701 CCDC62Q6P9F0 684 aa27.75■■■□□ 2.03
LITAF-213ENST00000574701 INPP4AQ96PE3 977 aaPredicted RBP27.75■■■□□ 2.03
LITAF-213ENST00000574701 LLPHQ9BRT6 129 aaKnown RBP27.75■■■□□ 2.03
LITAF-213ENST00000574701 DDX41Q9UJV9 622 aaKnown RBP27.75■■■□□ 2.03
LITAF-213ENST00000574701 FIBPO43427 364 aa27.74■■■□□ 2.03
LITAF-213ENST00000574701 JAK2O60674 1132 aa27.74■■■□□ 2.03
LITAF-213ENST00000574701 RGS20O76081 388 aa27.74■■■□□ 2.03
LITAF-213ENST00000574701 TGFB3P10600 412 aa27.74■■■□□ 2.03
LITAF-213ENST00000574701 PTGS1P23219 599 aa27.74■■■□□ 2.03
LITAF-213ENST00000574701 SREBF1P36956 1147 aa27.74■■■□□ 2.03
LITAF-213ENST00000574701 BEX3Q00994 111 aa27.74■■■□□ 2.03
LITAF-213ENST00000574701 KCNA10Q16322 511 aa27.74■■■□□ 2.03
LITAF-213ENST00000574701 COPS5Q92905 334 aa27.74■■■□□ 2.03
LITAF-213ENST00000574701 DTNBO60941 627 aa27.73■■■□□ 2.03
LITAF-213ENST00000574701 ACLYP53396 1101 aa27.73■■■□□ 2.03
LITAF-213ENST00000574701 BLIDQ8IZY5 108 aa27.73■■■□□ 2.03
LITAF-213ENST00000574701 DAGLBQ8NCG7 672 aa27.73■■■□□ 2.03
LITAF-213ENST00000574701 RASGRP4Q8TDF6 673 aa27.73■■■□□ 2.03
LITAF-213ENST00000574701 FERMT2Q96AC1 680 aa27.73■■■□□ 2.03
LITAF-213ENST00000574701 CDHR1Q96JP9 859 aa27.73■■■□□ 2.03
LITAF-213ENST00000574701 A0A1W2PQ45 241 aaPredicted RBP27.72■■■□□ 2.03
LITAF-213ENST00000574701 A0A1W2PQY0 241 aa27.72■■■□□ 2.03
LITAF-213ENST00000574701 CTAGE5O15320 804 aa27.72■■■□□ 2.03
LITAF-213ENST00000574701 ASGR1P07306 291 aa27.72■■■□□ 2.03
LITAF-213ENST00000574701 FDPSP14324 419 aaKnown RBP27.72■■■□□ 2.03
LITAF-213ENST00000574701 ICAM3P32942 547 aa27.72■■■□□ 2.03
LITAF-213ENST00000574701 IRX5P78411 483 aaPredicted RBP27.72■■■□□ 2.03
LITAF-213ENST00000574701 HMGN5P82970 282 aaKnown RBP27.72■■■□□ 2.03
LITAF-213ENST00000574701 TRIM29Q14134 588 aa27.72■■■□□ 2.03
LITAF-213ENST00000574701 CCSAPQ6IQ19 270 aaPredicted RBP27.72■■■□□ 2.03
LITAF-213ENST00000574701 DPF3Q92784 378 aa27.72■■■□□ 2.03
LITAF-213ENST00000574701 GPRASP2Q96D09 838 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms