RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 KIZQ2M2Z5 673 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 RRP12Q5JTH9 1297 aaKnown RBP2.62□□□□□ -1.99
CHD3-217ENST00000574022 IFIT1BQ5T764 474 aaKnown RBP2.62□□□□□ -1.99
CHD3-217ENST00000574022 ANO1Q5XXA6 986 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 E4F1Q66K89 784 aaPredicted RBP2.62□□□□□ -1.99
CHD3-217ENST00000574022 C16orf59Q7L2K0 433 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 CHST15Q7LFX5 561 aaPredicted RBP2.62□□□□□ -1.99
CHD3-217ENST00000574022 TMC3Q7Z5M5 1100 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 CATIPQ7Z7H3 387 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 RASSF3Q86WH2 238 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 ZNF354CQ86Y25 554 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 FAM186BQ8IYM0 893 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 IFNL2Q8IZJ0 200 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 CPXCR1Q8N123 301 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 DTWD1Q8N5C7 304 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 EFHBQ8N7U6 833 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 ANKRD42Q8N9B4 389 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 ACRBPQ8NEB7 543 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 VPS37AQ8NEZ2 397 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 NPLOC4Q8TAT6 608 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 PANK1Q8TE04 598 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 PARD3BQ8TEW8 1205 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 EDARADDQ8WWZ3 215 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 DIO2Q92813 273 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 GJA10Q969M2 543 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 FBXW5Q969U6 566 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 RUNDC1Q96C34 613 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 BTBD6Q96KE9 485 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 HERPUD2Q9BSE4 406 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 MCMBPQ9BTE3 642 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 SLC12A5Q9H2X9 1139 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 GSX1Q9H4S2 264 aaPredicted RBP2.62□□□□□ -1.99
CHD3-217ENST00000574022 NMRK2Q9NPI5 230 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 NLRC4Q9NPP4 1024 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 CATSPERZQ9NTU4 200 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 FAM105AQ9NUU6 356 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 KLHL11Q9NVR0 708 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 GPATCH2Q9NW75 528 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 H2AFY2Q9P0M6 372 aaPredicted RBP2.62□□□□□ -1.99
CHD3-217ENST00000574022 TMEFF2Q9UIK5 374 aaPredicted RBP2.62□□□□□ -1.99
CHD3-217ENST00000574022 PHTF1Q9UMS5 762 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 NOC2LQ9Y3T9 749 aaKnown RBP2.62□□□□□ -1.99
CHD3-217ENST00000574022 BACE2Q9Y5Z0 518 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.61□□□□□ -1.99
CHD3-217ENST00000574022 TRIM75PA6NK02 468 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 H7C1D1 291 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 WNT9AO14904 365 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 H2AFYO75367 372 aaKnown RBP2.61□□□□□ -1.99
CHD3-217ENST00000574022 OFD1O75665 1012 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 WISP1O95388 367 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 TIAF1O95411 115 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 PRAMEF1O95521 474 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 CD3EP07766 207 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 MYL3P08590 195 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 SETSIPP0DME0 302 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 LCP1P13796 627 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 PLS3P13797 630 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 LSP1P33241 339 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 HALP42357 657 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 GPR3P46089 330 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 USP11P51784 963 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 GJA9P57773 515 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 LMOD3Q0VAK6 560 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 STK3Q13188 491 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 NMIQ13287 307 aaPredicted RBP2.61□□□□□ -1.99
CHD3-217ENST00000574022 KCNAB2Q13303 367 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 GALEQ14376 348 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 TERF2Q15554 542 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 TESK1Q15569 626 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 ZNF174Q15697 407 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 TRAPPC3LQ5T215 181 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 CYB5RLQ6IPT4 315 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 GPAT2Q6NUI2 795 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 FDX2Q6P4F2 183 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 B3GNT9Q6UX72 402 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 C1orf229Q6ZS94 237 aaPredicted RBP2.61□□□□□ -1.99
CHD3-217ENST00000574022 KIAA1211Q6ZU35 1233 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 ACAD11Q709F0 780 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 CHSY3Q70JA7 882 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 ILDR2Q71H61 639 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 SRGAP1Q7Z6B7 1085 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 SRLQ86TD4 932 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 SKAP1Q86WV1 359 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 FBXO11Q86XK2 927 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 CCDC103Q8IW40 242 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 CMIPQ8IY22 773 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 FAM43AQ8N2R8 423 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 CISD2Q8N5K1 135 aaKnown RBP2.61□□□□□ -1.99
CHD3-217ENST00000574022 GALNT6Q8NCL4 622 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 C2CD4AQ8NCU7 369 aaPredicted RBP2.61□□□□□ -1.99
CHD3-217ENST00000574022 ENOX1Q8TC92 643 aaKnown RBP2.61□□□□□ -1.99
CHD3-217ENST00000574022 LMBR1Q8WVP7 490 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 CHAMP1Q96JM3 812 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 TEKT5Q96M29 485 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 FCRL3Q96P31 734 aaPredicted RBP2.61□□□□□ -1.99
CHD3-217ENST00000574022 MYD88Q99836 296 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 SENP7Q9BQF6 1050 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 NAA15Q9BXJ9 866 aaKnown RBP2.61□□□□□ -1.99
CHD3-217ENST00000574022 RNF38Q9H0F5 515 aa2.61□□□□□ -1.99
CHD3-217ENST00000574022 IPPKQ9H8X2 491 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms