RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 PCNX4Q63HM2 1172 aa14.61□□□□□ -0.07
TRAPPC1-206ENST00000573989 SEPT14Q6ZU15 432 aa14.61□□□□□ -0.07
TRAPPC1-206ENST00000573989 NSUN7Q8NE18 718 aaKnown RBP14.61□□□□□ -0.07
TRAPPC1-206ENST00000573989 SHISA4Q96DD7 197 aa14.61□□□□□ -0.07
TRAPPC1-206ENST00000573989 AP5M1Q9H0R1 490 aa14.61□□□□□ -0.07
TRAPPC1-206ENST00000573989 KIF3AQ9Y496 699 aa14.61□□□□□ -0.07
TRAPPC1-206ENST00000573989 DDX49Q9Y6V7 483 aaKnown RBP14.61□□□□□ -0.07
TRAPPC1-206ENST00000573989 BRCA2P51587 3418 aa14.6□□□□□ -0.07
TRAPPC1-206ENST00000573989 DNM1LO00429 736 aa14.6□□□□□ -0.07
TRAPPC1-206ENST00000573989 CTDNEP1O95476 244 aa14.6□□□□□ -0.07
TRAPPC1-206ENST00000573989 MYCNP04198 464 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC1-206ENST00000573989 TXNP10599 105 aaKnown RBP14.6□□□□□ -0.07
TRAPPC1-206ENST00000573989 TGFB3P10600 412 aa14.6□□□□□ -0.07
TRAPPC1-206ENST00000573989 CLK2P49760 499 aaKnown RBP14.6□□□□□ -0.07
TRAPPC1-206ENST00000573989 RGS19P49795 217 aa14.6□□□□□ -0.07
TRAPPC1-206ENST00000573989 TRIM29Q14134 588 aa14.6□□□□□ -0.07
TRAPPC1-206ENST00000573989 NECAB2Q7Z6G3 386 aa14.6□□□□□ -0.07
TRAPPC1-206ENST00000573989 NLRX1Q86UT6 975 aa14.6□□□□□ -0.07
TRAPPC1-206ENST00000573989 PCSK9Q8NBP7 692 aaKnown RBP14.6□□□□□ -0.07
TRAPPC1-206ENST00000573989 ALG1Q9BT22 464 aa14.6□□□□□ -0.07
TRAPPC1-206ENST00000573989 ANO3Q9BYT9 981 aa14.6□□□□□ -0.07
TRAPPC1-206ENST00000573989 BRMS1Q9HCU9 246 aa14.6□□□□□ -0.07
TRAPPC1-206ENST00000573989 PDGFCQ9NRA1 345 aa14.6□□□□□ -0.07
TRAPPC1-206ENST00000573989 PCDHA4Q9UN74 947 aa14.6□□□□□ -0.07
TRAPPC1-206ENST00000573989 MRVI1Q9Y6F6 885 aa14.6□□□□□ -0.07
TRAPPC1-206ENST00000573989 MYH7BA7E2Y1 1941 aa14.6□□□□□ -0.07
TRAPPC1-206ENST00000573989 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC1-206ENST00000573989 ZEB2O60315 1214 aa14.59□□□□□ -0.07
TRAPPC1-206ENST00000573989 C6orf222P0C671 652 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC1-206ENST00000573989 SMPD1P17405 629 aa14.59□□□□□ -0.07
TRAPPC1-206ENST00000573989 GJA9P57773 515 aa14.59□□□□□ -0.07
TRAPPC1-206ENST00000573989 JAKMIP3Q5VZ66 844 aa14.59□□□□□ -0.07
TRAPPC1-206ENST00000573989 TLK2Q86UE8 772 aa14.59□□□□□ -0.07
TRAPPC1-206ENST00000573989 FAM184AQ8NB25 1140 aa14.59□□□□□ -0.07
TRAPPC1-206ENST00000573989 CDHR1Q96JP9 859 aa14.59□□□□□ -0.07
TRAPPC1-206ENST00000573989 SYNRGQ9UMZ2 1314 aa14.59□□□□□ -0.07
TRAPPC1-206ENST00000573989 MAFGO15525 162 aa14.58□□□□□ -0.08
TRAPPC1-206ENST00000573989 DYNC1LI2O43237 492 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC1-206ENST00000573989 PGK1P00558 417 aa14.58□□□□□ -0.08
TRAPPC1-206ENST00000573989 LRRC41Q15345 812 aa14.58□□□□□ -0.08
TRAPPC1-206ENST00000573989 GJC2Q5T442 439 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC1-206ENST00000573989 BLIDQ8IZY5 108 aa14.58□□□□□ -0.08
TRAPPC1-206ENST00000573989 DAGLBQ8NCG7 672 aa14.58□□□□□ -0.08
TRAPPC1-206ENST00000573989 IL31RAQ8NI17 732 aa14.58□□□□□ -0.08
TRAPPC1-206ENST00000573989 TMX3Q96JJ7 454 aa14.58□□□□□ -0.08
TRAPPC1-206ENST00000573989 TSEN34Q9BSV6 310 aaKnown RBP14.58□□□□□ -0.08
TRAPPC1-206ENST00000573989 HTATIP2Q9BUP3 242 aa14.58□□□□□ -0.08
TRAPPC1-206ENST00000573989 UPF3AQ9H1J1 476 aaKnown RBP14.58□□□□□ -0.08
TRAPPC1-206ENST00000573989 C11orf49Q9H6J7 331 aa14.58□□□□□ -0.08
TRAPPC1-206ENST00000573989 GNEQ9Y223 722 aaKnown RBP14.58□□□□□ -0.08
TRAPPC1-206ENST00000573989 MOXD2PA6NHM9 499 aa14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 FIBPO43427 364 aa14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 JAK2O60674 1132 aa14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 ADAMTS4O75173 837 aa14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 GH1P01241 217 aa14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 FDPSP14324 419 aaKnown RBP14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 CST5P28325 142 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 ZNF76P36508 570 aa14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 SREBF1P36956 1147 aa14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 CPT1AP50416 773 aa14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 MRPS9P82933 396 aaKnown RBP14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 MLLT1Q03111 559 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 GNASQ5JWF2 1037 aa14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 GIMAP8Q8ND71 665 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 OR6J1Q8NGC5 347 aa14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 LENG1Q96BZ8 264 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 GPRASP2Q96D09 838 aa14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 PAWRQ96IZ0 340 aaKnown RBP14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 AIFM3Q96NN9 605 aa14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 INPP4AQ96PE3 977 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 PHF20Q9BVI0 1012 aa14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 TMEM260Q9NX78 707 aa14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 RTEL1Q9NZ71 1219 aa14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC1-206ENST00000573989 ADCY6O43306 1168 aa14.56□□□□□ -0.08
TRAPPC1-206ENST00000573989 ICAM3P32942 547 aa14.56□□□□□ -0.08
TRAPPC1-206ENST00000573989 NKX3-2P78367 333 aa14.56□□□□□ -0.08
TRAPPC1-206ENST00000573989 ARHGAP4P98171 946 aa14.56□□□□□ -0.08
TRAPPC1-206ENST00000573989 ST3GAL1Q11201 340 aa14.56□□□□□ -0.08
TRAPPC1-206ENST00000573989 LAMC2Q13753 1193 aa14.56□□□□□ -0.08
TRAPPC1-206ENST00000573989 NEDD9Q14511 834 aa14.56□□□□□ -0.08
TRAPPC1-206ENST00000573989 SAFBQ15424 915 aaKnown RBP eCLIP14.56□□□□□ -0.08
TRAPPC1-206ENST00000573989 FSCN1Q16658 493 aaKnown RBP14.56□□□□□ -0.08
TRAPPC1-206ENST00000573989 LY6KQ17RY6 165 aa14.56□□□□□ -0.08
TRAPPC1-206ENST00000573989 CCDC62Q6P9F0 684 aa14.56□□□□□ -0.08
TRAPPC1-206ENST00000573989 KLHDC9Q8NEP7 349 aa14.56□□□□□ -0.08
TRAPPC1-206ENST00000573989 PGBD1Q96JS3 809 aa14.56□□□□□ -0.08
TRAPPC1-206ENST00000573989 DDX41Q9UJV9 622 aaKnown RBP14.56□□□□□ -0.08
TRAPPC1-206ENST00000573989 KCNJ14Q9UNX9 436 aa14.56□□□□□ -0.08
TRAPPC1-206ENST00000573989 CCDC194A0A1B0GVG4 234 aa14.55□□□□□ -0.08
TRAPPC1-206ENST00000573989 CABYRO75952 493 aa14.55□□□□□ -0.08
TRAPPC1-206ENST00000573989 RGS20O76081 388 aa14.55□□□□□ -0.08
TRAPPC1-206ENST00000573989 CD2BP2O95400 341 aaKnown RBP14.55□□□□□ -0.08
TRAPPC1-206ENST00000573989 CYP3A4P08684 503 aa14.55□□□□□ -0.08
TRAPPC1-206ENST00000573989 KRT2P35908 639 aa14.55□□□□□ -0.08
TRAPPC1-206ENST00000573989 MTMR1Q13613 665 aa14.55□□□□□ -0.08
TRAPPC1-206ENST00000573989 KCNA10Q16322 511 aa14.55□□□□□ -0.08
TRAPPC1-206ENST00000573989 CEP55Q53EZ4 464 aa14.55□□□□□ -0.08
TRAPPC1-206ENST00000573989 KRT25Q7Z3Z0 450 aa14.55□□□□□ -0.08
TRAPPC1-206ENST00000573989 DHX37Q8IY37 1157 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms