RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-223ENST00000573895 MYH7BA7E2Y1 1941 aa16.55■□□□□ 0.24
ABR-223ENST00000573895 SZT2Q5T011 3432 aa16.54■□□□□ 0.24
ABR-223ENST00000573895 LAMA2P24043 3122 aaKnown RBP16.54■□□□□ 0.24
ABR-223ENST00000573895 DCDC2CA8MYV0 355 aa16.54■□□□□ 0.24
ABR-223ENST00000573895 ARVCFO00192 962 aa16.54■□□□□ 0.24
ABR-223ENST00000573895 PLEKHA8P1O95397 391 aa16.54■□□□□ 0.24
ABR-223ENST00000573895 SLC34A2O95436 690 aa16.54■□□□□ 0.24
ABR-223ENST00000573895 TXNP10599 105 aaKnown RBP16.54■□□□□ 0.24
ABR-223ENST00000573895 PDIA3P30101 505 aaKnown RBP16.54■□□□□ 0.24
ABR-223ENST00000573895 FXR1P51114 621 aaKnown RBP eCLIP16.54■□□□□ 0.24
ABR-223ENST00000573895 APOBRQ0VD83 1088 aa16.54■□□□□ 0.24
ABR-223ENST00000573895 TMEM63BQ5T3F8 832 aa16.54■□□□□ 0.24
ABR-223ENST00000573895 VSIG10LQ86VR7 867 aa16.54■□□□□ 0.24
ABR-223ENST00000573895 TEX2Q8IWB9 1127 aa16.54■□□□□ 0.24
ABR-223ENST00000573895 SLC43A3Q8NBI5 491 aa16.54■□□□□ 0.24
ABR-223ENST00000573895 VTI1AQ96AJ9 217 aa16.54■□□□□ 0.24
ABR-223ENST00000573895 PDCD2LQ9BRP1 358 aa16.54■□□□□ 0.24
ABR-223ENST00000573895 SLKQ9H2G2 1235 aaPredicted RBP16.54■□□□□ 0.24
ABR-223ENST00000573895 POLR3EQ9NVU0 708 aa16.54■□□□□ 0.24
ABR-223ENST00000573895 SCN10AQ9Y5Y9 1956 aa16.54■□□□□ 0.24
ABR-223ENST00000573895 KLF18A0A0U1RQI7 1052 aa16.53■□□□□ 0.24
ABR-223ENST00000573895 A6NJR5 290 aa16.53■□□□□ 0.24
ABR-223ENST00000573895 PIK3CDO00329 1044 aa16.53■□□□□ 0.24
ABR-223ENST00000573895 KIAA0355O15063 1070 aa16.53■□□□□ 0.24
ABR-223ENST00000573895 ZBTB43O43298 467 aa16.53■□□□□ 0.24
ABR-223ENST00000573895 KPNA6O60684 536 aa16.53■□□□□ 0.24
ABR-223ENST00000573895 PFKFB2O60825 505 aa16.53■□□□□ 0.24
ABR-223ENST00000573895 PQBP1O60828 265 aaKnown RBP16.53■□□□□ 0.24
ABR-223ENST00000573895 EIF2AK2P19525 551 aaKnown RBP16.53■□□□□ 0.24
ABR-223ENST00000573895 RXRAP19793 462 aa16.53■□□□□ 0.24
ABR-223ENST00000573895 CUL4AQ13619 759 aa16.53■□□□□ 0.24
ABR-223ENST00000573895 KCNV1Q6PIU1 500 aa16.53■□□□□ 0.24
ABR-223ENST00000573895 MICU3Q86XE3 530 aa16.53■□□□□ 0.24
ABR-223ENST00000573895 UBE2OQ9C0C9 1292 aaKnown RBP16.53■□□□□ 0.24
ABR-223ENST00000573895 BRPF3Q9ULD4 1205 aa16.53■□□□□ 0.24
ABR-223ENST00000573895 FRMPD4Q14CM0 1322 aa16.52■□□□□ 0.24
ABR-223ENST00000573895 CCDC196A0A1B0GTZ2 297 aa16.52■□□□□ 0.24
ABR-223ENST00000573895 TRIM43BA6NCK2 446 aa16.52■□□□□ 0.24
ABR-223ENST00000573895 HOXA13P31271 388 aaPredicted RBP16.52■□□□□ 0.24
ABR-223ENST00000573895 MDM2Q00987 491 aaPredicted RBP16.52■□□□□ 0.24
ABR-223ENST00000573895 FAAP100Q0VG06 881 aa16.52■□□□□ 0.24
ABR-223ENST00000573895 PGM5Q15124 567 aa16.52■□□□□ 0.24
ABR-223ENST00000573895 ME3Q16798 604 aa16.52■□□□□ 0.24
ABR-223ENST00000573895 CXCL17Q6UXB2 119 aa16.52■□□□□ 0.24
ABR-223ENST00000573895 TDHQ8IZJ6 230 aa16.52■□□□□ 0.24
ABR-223ENST00000573895 OR6J1Q8NGC5 347 aa16.52■□□□□ 0.24
ABR-223ENST00000573895 TRIM43Q96BQ3 446 aaPredicted RBP16.52■□□□□ 0.24
ABR-223ENST00000573895 INTS4Q96HW7 963 aaKnown RBP16.52■□□□□ 0.24
ABR-223ENST00000573895 LARP6Q9BRS8 491 aaKnown RBP16.52■□□□□ 0.24
ABR-223ENST00000573895 PRDM5Q9NQX1 630 aaPredicted RBP16.52■□□□□ 0.24
ABR-223ENST00000573895 STAM2O75886 525 aa16.51■□□□□ 0.23
ABR-223ENST00000573895 ARIH2O95376 493 aa16.51■□□□□ 0.23
ABR-223ENST00000573895 HSP90AA1P07900 732 aaKnown RBP16.51■□□□□ 0.23
ABR-223ENST00000573895 TGFB3P10600 412 aa16.51■□□□□ 0.23
ABR-223ENST00000573895 PURAQ00577 322 aaKnown RBP16.51■□□□□ 0.23
ABR-223ENST00000573895 ITGA7Q13683 1181 aa16.51■□□□□ 0.23
ABR-223ENST00000573895 RTN1Q16799 776 aa16.51■□□□□ 0.23
ABR-223ENST00000573895 SEPT14Q6ZU15 432 aa16.51■□□□□ 0.23
ABR-223ENST00000573895 SH3RF1Q7Z6J0 888 aa16.51■□□□□ 0.23
ABR-223ENST00000573895 FAM126BQ8IXS8 530 aa16.51■□□□□ 0.23
ABR-223ENST00000573895 CMTR1Q8N1G2 835 aaKnown RBP16.51■□□□□ 0.23
ABR-223ENST00000573895 PIBF1Q8WXW3 757 aa16.51■□□□□ 0.23
ABR-223ENST00000573895 CUL5Q93034 780 aa16.51■□□□□ 0.23
ABR-223ENST00000573895 EMID1Q96A84 441 aaPredicted RBP16.51■□□□□ 0.23
ABR-223ENST00000573895 TMEM39AQ9NV64 488 aa16.51■□□□□ 0.23
ABR-223ENST00000573895 DDX41Q9UJV9 622 aaKnown RBP16.51■□□□□ 0.23
ABR-223ENST00000573895 NAP1L2Q9ULW6 460 aaPredicted RBP16.51■□□□□ 0.23
ABR-223ENST00000573895 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.51■□□□□ 0.23
ABR-223ENST00000573895 hCG_1984214I3L0E3 225 aa16.5■□□□□ 0.23
ABR-223ENST00000573895 MEIS2O14770 477 aa16.5■□□□□ 0.23
ABR-223ENST00000573895 TLR3O15455 904 aaKnown RBP16.5■□□□□ 0.23
ABR-223ENST00000573895 GH1P01241 217 aa16.5■□□□□ 0.23
ABR-223ENST00000573895 PTGS1P23219 599 aa16.5■□□□□ 0.23
ABR-223ENST00000573895 CCND2P30279 289 aa16.5■□□□□ 0.23
ABR-223ENST00000573895 FUT2Q10981 343 aa16.5■□□□□ 0.23
ABR-223ENST00000573895 LRIT3Q3SXY7 679 aa16.5■□□□□ 0.23
ABR-223ENST00000573895 XRRA1Q6P2D8 792 aa16.5■□□□□ 0.23
ABR-223ENST00000573895 FCHSD1Q86WN1 690 aa16.5■□□□□ 0.23
ABR-223ENST00000573895 ZNF713Q8N859 430 aaPredicted RBP16.5■□□□□ 0.23
ABR-223ENST00000573895 LLPHQ9BRT6 129 aaKnown RBP16.5■□□□□ 0.23
ABR-223ENST00000573895 MTG1Q9BT17 334 aaPredicted RBP16.5■□□□□ 0.23
ABR-223ENST00000573895 TBX21Q9UL17 535 aa16.5■□□□□ 0.23
ABR-223ENST00000573895 NID2Q14112 1375 aa16.5■□□□□ 0.23
ABR-223ENST00000573895 GRIN2DO15399 1336 aa16.49■□□□□ 0.23
ABR-223ENST00000573895 CNTNAP5Q8WYK1 1306 aa16.49■□□□□ 0.23
ABR-223ENST00000573895 GOLGA8BA8MQT2 603 aa16.49■□□□□ 0.23
ABR-223ENST00000573895 RGS20O76081 388 aa16.49■□□□□ 0.23
ABR-223ENST00000573895 CD4P01730 458 aa16.49■□□□□ 0.23
ABR-223ENST00000573895 RAG1P15918 1043 aa16.49■□□□□ 0.23
ABR-223ENST00000573895 ARHGAP1Q07960 439 aa16.49■□□□□ 0.23
ABR-223ENST00000573895 CPLX2Q6PUV4 134 aaKnown RBP16.49■□□□□ 0.23
ABR-223ENST00000573895 RAB11FIP4Q86YS3 637 aa16.49■□□□□ 0.23
ABR-223ENST00000573895 SMARCC2Q8TAQ2 1214 aa16.49■□□□□ 0.23
ABR-223ENST00000573895 COPS5Q92905 334 aa16.49■□□□□ 0.23
ABR-223ENST00000573895 BADQ92934 168 aa16.49■□□□□ 0.23
ABR-223ENST00000573895 GTF3C6Q969F1 213 aa16.49■□□□□ 0.23
ABR-223ENST00000573895 PSTPIP2Q9H939 334 aa16.49■□□□□ 0.23
ABR-223ENST00000573895 MRVI1Q9Y6F6 885 aa16.49■□□□□ 0.23
ABR-223ENST00000573895 GOLGA8AA7E2F4 631 aa16.48■□□□□ 0.23
ABR-223ENST00000573895 LARGE1O95461 756 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms