RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 NUP62CLQ9H1M0 184 aa15.48■□□□□ 0.07
CCDC40-209ENST00000573474 CLSTN2Q9H4D0 955 aa15.48■□□□□ 0.07
CCDC40-209ENST00000573474 MROH8Q9H579 483 aa15.48■□□□□ 0.07
CCDC40-209ENST00000573474 KCNMB3Q9NPA1 279 aa15.48■□□□□ 0.07
CCDC40-209ENST00000573474 PXMP2Q9NR77 195 aa15.48■□□□□ 0.07
CCDC40-209ENST00000573474 MYH7BA7E2Y1 1941 aa15.48■□□□□ 0.07
CCDC40-209ENST00000573474 FAM155AB1AL88 458 aaPredicted RBP15.47■□□□□ 0.07
CCDC40-209ENST00000573474 ZNF202O95125 648 aa15.47■□□□□ 0.07
CCDC40-209ENST00000573474 PDIA5Q14554 519 aa15.47■□□□□ 0.07
CCDC40-209ENST00000573474 CEP55Q53EZ4 464 aa15.47■□□□□ 0.07
CCDC40-209ENST00000573474 NIPA1Q7RTP0 329 aa15.47■□□□□ 0.07
CCDC40-209ENST00000573474 ZNF784Q8NCA9 323 aaPredicted RBP15.47■□□□□ 0.07
CCDC40-209ENST00000573474 NSUN6Q8TEA1 469 aaKnown RBP15.47■□□□□ 0.07
CCDC40-209ENST00000573474 LENG9Q96B70 501 aa15.47■□□□□ 0.07
CCDC40-209ENST00000573474 EPSTI1Q96J88 318 aa15.47■□□□□ 0.07
CCDC40-209ENST00000573474 FAM20AQ96MK3 541 aa15.47■□□□□ 0.07
CCDC40-209ENST00000573474 TIGD1Q96MW7 591 aa15.47■□□□□ 0.07
CCDC40-209ENST00000573474 PDCD2LQ9BRP1 358 aa15.47■□□□□ 0.07
CCDC40-209ENST00000573474 RAB34Q9BZG1 259 aa15.47■□□□□ 0.07
CCDC40-209ENST00000573474 MORF4L1Q9UBU8 362 aa15.47■□□□□ 0.07
CCDC40-209ENST00000573474 RBBP6Q7Z6E9 1792 aaKnown RBP15.47■□□□□ 0.07
CCDC40-209ENST00000573474 IGLV3-22A0A075B6J6 115 aa15.46■□□□□ 0.07
CCDC40-209ENST00000573474 MEIS1O00470 390 aa15.46■□□□□ 0.07
CCDC40-209ENST00000573474 CTAGE5O15320 804 aa15.46■□□□□ 0.07
CCDC40-209ENST00000573474 EIF2AK2P19525 551 aaKnown RBP15.46■□□□□ 0.07
CCDC40-209ENST00000573474 TXLNAP40222 546 aa15.46■□□□□ 0.07
CCDC40-209ENST00000573474 TECP42680 631 aa15.46■□□□□ 0.07
CCDC40-209ENST00000573474 SETQ01105 290 aaPredicted RBP15.46■□□□□ 0.07
CCDC40-209ENST00000573474 SREBF2Q12772 1141 aa15.46■□□□□ 0.07
CCDC40-209ENST00000573474 PGM5Q15124 567 aa15.46■□□□□ 0.07
CCDC40-209ENST00000573474 USP49Q70CQ1 688 aa15.46■□□□□ 0.07
CCDC40-209ENST00000573474 PLA2G4DQ86XP0 818 aa15.46■□□□□ 0.07
CCDC40-209ENST00000573474 IGSF22Q8N9C0 903 aa15.46■□□□□ 0.07
CCDC40-209ENST00000573474 DNERQ8NFT8 737 aa15.46■□□□□ 0.07
CCDC40-209ENST00000573474 CYP2W1Q8TAV3 490 aa15.46■□□□□ 0.07
CCDC40-209ENST00000573474 ETNPPLQ8TBG4 499 aa15.46■□□□□ 0.07
CCDC40-209ENST00000573474 MXRA8Q9BRK3 442 aa15.46■□□□□ 0.07
CCDC40-209ENST00000573474 PYM1Q9BRP8 204 aaKnown RBP15.46■□□□□ 0.07
CCDC40-209ENST00000573474 PCDHA12Q9UN75 941 aa15.46■□□□□ 0.07
CCDC40-209ENST00000573474 POTEB2H3BUK9 544 aa15.45■□□□□ 0.06
CCDC40-209ENST00000573474 IGF2BP3O00425 579 aaKnown RBP eCLIP15.45■□□□□ 0.06
CCDC40-209ENST00000573474 MSH4O15457 936 aa15.45■□□□□ 0.06
CCDC40-209ENST00000573474 POLR2DO15514 142 aaKnown RBP15.45■□□□□ 0.06
CCDC40-209ENST00000573474 BCRP11274 1271 aa15.45■□□□□ 0.06
CCDC40-209ENST00000573474 CCND2P30279 289 aa15.45■□□□□ 0.06
CCDC40-209ENST00000573474 UBA7P41226 1012 aa15.45■□□□□ 0.06
CCDC40-209ENST00000573474 VSIG10LQ86VR7 867 aa15.45■□□□□ 0.06
CCDC40-209ENST00000573474 IFNL1Q8IU54 200 aa15.45■□□□□ 0.06
CCDC40-209ENST00000573474 ANKRD13CQ8N6S4 541 aa15.45■□□□□ 0.06
CCDC40-209ENST00000573474 IL31RAQ8NI17 732 aa15.45■□□□□ 0.06
CCDC40-209ENST00000573474 PURBQ96QR8 312 aaKnown RBP15.45■□□□□ 0.06
CCDC40-209ENST00000573474 IWS1Q96ST2 819 aa15.45■□□□□ 0.06
CCDC40-209ENST00000573474 SDF4Q9BRK5 362 aa15.45■□□□□ 0.06
CCDC40-209ENST00000573474 CCSER1Q9C0I3 900 aa15.45■□□□□ 0.06
CCDC40-209ENST00000573474 TNMDQ9H2S6 317 aa15.45■□□□□ 0.06
CCDC40-209ENST00000573474 TTC12Q9H892 705 aaPredicted RBP15.45■□□□□ 0.06
CCDC40-209ENST00000573474 USP25Q9UHP3 1055 aa15.45■□□□□ 0.06
CCDC40-209ENST00000573474 UBIAD1Q9Y5Z9 338 aa15.45■□□□□ 0.06
CCDC40-209ENST00000573474 NR3C2P08235 984 aa15.44■□□□□ 0.06
CCDC40-209ENST00000573474 FCER1AP12319 257 aa15.44■□□□□ 0.06
CCDC40-209ENST00000573474 MYCLP12524 364 aaPredicted RBP15.44■□□□□ 0.06
CCDC40-209ENST00000573474 TM4SF4P48230 202 aa15.44■□□□□ 0.06
CCDC40-209ENST00000573474 ZNF445P59923 1031 aa15.44■□□□□ 0.06
CCDC40-209ENST00000573474 MRPS9P82933 396 aaKnown RBP15.44■□□□□ 0.06
CCDC40-209ENST00000573474 KCTD2Q14681 263 aa15.44■□□□□ 0.06
CCDC40-209ENST00000573474 CAMK4Q16566 473 aa15.44■□□□□ 0.06
CCDC40-209ENST00000573474 ELOA2Q8IYF1 753 aaPredicted RBP15.44■□□□□ 0.06
CCDC40-209ENST00000573474 MMP19Q99542 508 aa15.44■□□□□ 0.06
CCDC40-209ENST00000573474 PANK2Q9BZ23 570 aa15.44■□□□□ 0.06
CCDC40-209ENST00000573474 JADE2Q9NQC1 790 aa15.44■□□□□ 0.06
CCDC40-209ENST00000573474 ADD3Q9UEY8 706 aaKnown RBP15.44■□□□□ 0.06
CCDC40-209ENST00000573474 LRWD1Q9UFC0 647 aa15.44■□□□□ 0.06
CCDC40-209ENST00000573474 SYCE3A1L190 88 aa15.43■□□□□ 0.06
CCDC40-209ENST00000573474 STAM2O75886 525 aa15.43■□□□□ 0.06
CCDC40-209ENST00000573474 ITGB5P18084 799 aa15.43■□□□□ 0.06
CCDC40-209ENST00000573474 CNTN2Q02246 1040 aa15.43■□□□□ 0.06
CCDC40-209ENST00000573474 TAF1CQ15572 869 aaPredicted RBP15.43■□□□□ 0.06
CCDC40-209ENST00000573474 FAM110CQ1W6H9 321 aa15.43■□□□□ 0.06
CCDC40-209ENST00000573474 LONRF3Q496Y0 759 aa15.43■□□□□ 0.06
CCDC40-209ENST00000573474 WDR78Q5VTH9 848 aa15.43■□□□□ 0.06
CCDC40-209ENST00000573474 KANK3Q6NY19 840 aa15.43■□□□□ 0.06
CCDC40-209ENST00000573474 KRBA2Q6ZNG9 492 aa15.43■□□□□ 0.06
CCDC40-209ENST00000573474 PAXIP1Q6ZW49 1069 aaPredicted RBP15.43■□□□□ 0.06
CCDC40-209ENST00000573474 CABP7Q86V35 215 aa15.43■□□□□ 0.06
CCDC40-209ENST00000573474 PDILTQ8N807 584 aa15.43■□□□□ 0.06
CCDC40-209ENST00000573474 FAM133AQ8N9E0 248 aa15.43■□□□□ 0.06
CCDC40-209ENST00000573474 IQUBQ8NA54 791 aa15.43■□□□□ 0.06
CCDC40-209ENST00000573474 CNNM3Q8NE01 707 aa15.43■□□□□ 0.06
CCDC40-209ENST00000573474 SLC5A5Q92911 643 aa15.43■□□□□ 0.06
CCDC40-209ENST00000573474 PORCNQ9H237 461 aa15.43■□□□□ 0.06
CCDC40-209ENST00000573474 R3HDMLQ9H3Y0 253 aa15.43■□□□□ 0.06
CCDC40-209ENST00000573474 CREBZFQ9NS37 354 aa15.43■□□□□ 0.06
CCDC40-209ENST00000573474 CCDC39Q9UFE4 941 aa15.43■□□□□ 0.06
CCDC40-209ENST00000573474 PP2D1A8MPX8 630 aa15.42■□□□□ 0.06
CCDC40-209ENST00000573474 B4DLN1 442 aa15.42■□□□□ 0.06
CCDC40-209ENST00000573474 SLC26A4O43511 780 aa15.42■□□□□ 0.06
CCDC40-209ENST00000573474 STRNO43815 780 aa15.42■□□□□ 0.06
CCDC40-209ENST00000573474 ARP10275 920 aa15.42■□□□□ 0.06
CCDC40-209ENST00000573474 CDC25AP30304 524 aa15.42■□□□□ 0.06
CCDC40-209ENST00000573474 APLP1P51693 650 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms