RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 PGM5Q15124 567 aa18.16■□□□□ 0.5
CHD3-215ENST00000572750 TMEM63BQ5T3F8 832 aa18.16■□□□□ 0.5
CHD3-215ENST00000572750 PAWRQ96IZ0 340 aaKnown RBP18.16■□□□□ 0.5
CHD3-215ENST00000572750 XPNPEP3Q9NQH7 507 aa18.16■□□□□ 0.5
CHD3-215ENST00000572750 VPS54Q9P1Q0 977 aa18.16■□□□□ 0.5
CHD3-215ENST00000572750 B4DLN1 442 aa18.15■□□□□ 0.5
CHD3-215ENST00000572750 CDKL5O76039 1030 aa18.15■□□□□ 0.5
CHD3-215ENST00000572750 CTDNEP1O95476 244 aa18.15■□□□□ 0.5
CHD3-215ENST00000572750 PGK1P00558 417 aa18.15■□□□□ 0.5
CHD3-215ENST00000572750 NR3C2P08235 984 aa18.15■□□□□ 0.5
CHD3-215ENST00000572750 MYCLP12524 364 aaPredicted RBP18.15■□□□□ 0.5
CHD3-215ENST00000572750 MRPL12P52815 198 aaKnown RBP18.15■□□□□ 0.5
CHD3-215ENST00000572750 TNFAIP2Q03169 654 aa18.15■□□□□ 0.5
CHD3-215ENST00000572750 GJC2Q5T442 439 aaPredicted RBP18.15■□□□□ 0.5
CHD3-215ENST00000572750 C7orf61Q8IZ16 206 aa18.15■□□□□ 0.5
CHD3-215ENST00000572750 ANKLE1Q8NAG6 615 aa18.15■□□□□ 0.5
CHD3-215ENST00000572750 ZFP91Q96JP5 570 aaPredicted RBP18.15■□□□□ 0.5
CHD3-215ENST00000572750 AIFM3Q96NN9 605 aa18.15■□□□□ 0.5
CHD3-215ENST00000572750 IWS1Q96ST2 819 aa18.15■□□□□ 0.5
CHD3-215ENST00000572750 RIC8AQ9NPQ8 531 aa18.15■□□□□ 0.5
CHD3-215ENST00000572750 LIMCH1Q9UPQ0 1083 aa18.15■□□□□ 0.5
CHD3-215ENST00000572750 SMCO2A6NFE2 343 aa18.14■□□□□ 0.49
CHD3-215ENST00000572750 DEXIO95424 95 aa18.14■□□□□ 0.49
CHD3-215ENST00000572750 SMPD1P17405 629 aa18.14■□□□□ 0.49
CHD3-215ENST00000572750 MAGEA10P43363 369 aaPredicted RBP18.14■□□□□ 0.49
CHD3-215ENST00000572750 IRX5P78411 483 aaPredicted RBP18.14■□□□□ 0.49
CHD3-215ENST00000572750 STXBP2Q15833 593 aa18.14■□□□□ 0.49
CHD3-215ENST00000572750 PGBD1Q96JS3 809 aa18.14■□□□□ 0.49
CHD3-215ENST00000572750 RAPGEFL1Q9UHV5 662 aa18.14■□□□□ 0.49
CHD3-215ENST00000572750 STK36Q9NRP7 1315 aa18.14■□□□□ 0.49
CHD3-215ENST00000572750 MYADML2A6NDP7 307 aa18.13■□□□□ 0.49
CHD3-215ENST00000572750 SPDYE3A6NKU9 549 aa18.13■□□□□ 0.49
CHD3-215ENST00000572750 DNM1LO00429 736 aa18.13■□□□□ 0.49
CHD3-215ENST00000572750 ADAMTS3O15072 1205 aa18.13■□□□□ 0.49
CHD3-215ENST00000572750 ADAMTS4O75173 837 aa18.13■□□□□ 0.49
CHD3-215ENST00000572750 DUSP11O75319 330 aaKnown RBP18.13■□□□□ 0.49
CHD3-215ENST00000572750 CD2BP2O95400 341 aaKnown RBP18.13■□□□□ 0.49
CHD3-215ENST00000572750 SYN1P17600 705 aa18.13■□□□□ 0.49
CHD3-215ENST00000572750 CCND2P30279 289 aa18.13■□□□□ 0.49
CHD3-215ENST00000572750 SEPT14Q6ZU15 432 aa18.13■□□□□ 0.49
CHD3-215ENST00000572750 TLK2Q86UE8 772 aa18.13■□□□□ 0.49
CHD3-215ENST00000572750 TDHQ8IZJ6 230 aa18.13■□□□□ 0.49
CHD3-215ENST00000572750 CCDC12Q8WUD4 166 aaPredicted RBP18.13■□□□□ 0.49
CHD3-215ENST00000572750 TMEM260Q9NX78 707 aa18.13■□□□□ 0.49
CHD3-215ENST00000572750 RBM47A0AV96 593 aaKnown RBP18.12■□□□□ 0.49
CHD3-215ENST00000572750 ESYT2A0FGR8 921 aa18.12■□□□□ 0.49
CHD3-215ENST00000572750 ST18O60284 1047 aa18.12■□□□□ 0.49
CHD3-215ENST00000572750 JAK2O60674 1132 aa18.12■□□□□ 0.49
CHD3-215ENST00000572750 ARIH2O95376 493 aa18.12■□□□□ 0.49
CHD3-215ENST00000572750 LRRC41Q15345 812 aa18.12■□□□□ 0.49
CHD3-215ENST00000572750 CCDC83Q8IWF9 413 aa18.12■□□□□ 0.49
CHD3-215ENST00000572750 NSUN7Q8NE18 718 aaKnown RBP18.12■□□□□ 0.49
CHD3-215ENST00000572750 CCDC148Q8NFR7 591 aa18.12■□□□□ 0.49
CHD3-215ENST00000572750 SCFD2Q8WU76 684 aa18.12■□□□□ 0.49
CHD3-215ENST00000572750 WDR11Q9BZH6 1224 aa18.12■□□□□ 0.49
CHD3-215ENST00000572750 ZMYND12Q9H0C1 365 aa18.12■□□□□ 0.49
CHD3-215ENST00000572750 GNEQ9Y223 722 aaKnown RBP18.12■□□□□ 0.49
CHD3-215ENST00000572750 DOCK5Q9H7D0 1870 aa18.12■□□□□ 0.49
CHD3-215ENST00000572750 KBTBD13C9JR72 458 aa18.11■□□□□ 0.49
CHD3-215ENST00000572750 EIF3JO75822 258 aaKnown RBP18.11■□□□□ 0.49
CHD3-215ENST00000572750 RGS20O76081 388 aa18.11■□□□□ 0.49
CHD3-215ENST00000572750 C6orf222P0C671 652 aaPredicted RBP18.11■□□□□ 0.49
CHD3-215ENST00000572750 CAPN2P17655 700 aa18.11■□□□□ 0.49
CHD3-215ENST00000572750 MRPS9P82933 396 aaKnown RBP18.11■□□□□ 0.49
CHD3-215ENST00000572750 DUSP28Q4G0W2 176 aa18.11■□□□□ 0.49
CHD3-215ENST00000572750 IQSEC1Q6DN90 963 aa18.11■□□□□ 0.49
CHD3-215ENST00000572750 NECAB2Q7Z6G3 386 aa18.11■□□□□ 0.49
CHD3-215ENST00000572750 RNF180Q86T96 592 aa18.11■□□□□ 0.49
CHD3-215ENST00000572750 VSIG10LQ86VR7 867 aa18.11■□□□□ 0.49
CHD3-215ENST00000572750 ARRDC4Q8NCT1 418 aa18.11■□□□□ 0.49
CHD3-215ENST00000572750 UPF3AQ9H1J1 476 aaKnown RBP18.11■□□□□ 0.49
CHD3-215ENST00000572750 C11orf49Q9H6J7 331 aa18.11■□□□□ 0.49
CHD3-215ENST00000572750 C6orf50Q9HD87 102 aa18.11■□□□□ 0.49
CHD3-215ENST00000572750 ORC3Q9UBD5 711 aaPredicted RBP18.11■□□□□ 0.49
CHD3-215ENST00000572750 PCDHA6Q9UN73 950 aa18.11■□□□□ 0.49
CHD3-215ENST00000572750 PCDHA8Q9Y5H6 950 aa18.11■□□□□ 0.49
CHD3-215ENST00000572750 MYH7BA7E2Y1 1941 aa18.11■□□□□ 0.49
CHD3-215ENST00000572750 COL6A1P12109 1028 aa18.1■□□□□ 0.49
CHD3-215ENST00000572750 CLK2P49760 499 aaKnown RBP18.1■□□□□ 0.49
CHD3-215ENST00000572750 GJA9P57773 515 aa18.1■□□□□ 0.49
CHD3-215ENST00000572750 TTLL4Q14679 1199 aa18.1■□□□□ 0.49
CHD3-215ENST00000572750 JAKMIP3Q5VZ66 844 aa18.1■□□□□ 0.49
CHD3-215ENST00000572750 PCNX4Q63HM2 1172 aa18.1■□□□□ 0.49
CHD3-215ENST00000572750 REXO1Q8N1G1 1221 aaKnown RBP18.1■□□□□ 0.49
CHD3-215ENST00000572750 RASGRP4Q8TDF6 673 aa18.1■□□□□ 0.49
CHD3-215ENST00000572750 COPS5Q92905 334 aa18.1■□□□□ 0.49
CHD3-215ENST00000572750 ANO3Q9BYT9 981 aa18.1■□□□□ 0.49
CHD3-215ENST00000572750 MRVI1Q9Y6F6 885 aa18.1■□□□□ 0.49
CHD3-215ENST00000572750 CTAGE5O15320 804 aa18.09■□□□□ 0.49
CHD3-215ENST00000572750 TXNP10599 105 aaKnown RBP18.09■□□□□ 0.49
CHD3-215ENST00000572750 FDPSP14324 419 aaKnown RBP18.09■□□□□ 0.49
CHD3-215ENST00000572750 COL9A1P20849 921 aa18.09■□□□□ 0.49
CHD3-215ENST00000572750 NLRP5P59047 1200 aa18.09■□□□□ 0.49
CHD3-215ENST00000572750 BEX3Q00994 111 aa18.09■□□□□ 0.49
CHD3-215ENST00000572750 AP3B2Q13367 1082 aa18.09■□□□□ 0.49
CHD3-215ENST00000572750 OR6J1Q8NGC5 347 aa18.09■□□□□ 0.49
CHD3-215ENST00000572750 GLT8D2Q9H1C3 349 aa18.09■□□□□ 0.49
CHD3-215ENST00000572750 SPC25Q9HBM1 224 aa18.09■□□□□ 0.49
CHD3-215ENST00000572750 SH3GLB2Q9NR46 395 aa18.09■□□□□ 0.49
CHD3-215ENST00000572750 SH2B1Q9NRF2 756 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms