RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 WTAPQ15007 396 aa21.05■□□□□ 0.96
CHD3-214ENST00000572579 TMEM67Q5HYA8 995 aa21.05■□□□□ 0.96
CHD3-214ENST00000572579 GPKOWQ92917 476 aaPredicted RBP eCLIP21.05■□□□□ 0.96
CHD3-214ENST00000572579 PDCD2LQ9BRP1 358 aa21.05■□□□□ 0.96
CHD3-214ENST00000572579 MYL10Q9BUA6 226 aa21.05■□□□□ 0.96
CHD3-214ENST00000572579 BCAS3Q9H6U6 928 aa21.05■□□□□ 0.96
CHD3-214ENST00000572579 LY9Q9HBG7 655 aa21.05■□□□□ 0.96
CHD3-214ENST00000572579 YBX2Q9Y2T7 364 aaKnown RBP21.05■□□□□ 0.96
CHD3-214ENST00000572579 SCN10AQ9Y5Y9 1956 aa21.05■□□□□ 0.96
CHD3-214ENST00000572579 SPTBN5Q9NRC6 3674 aaKnown RBP21.04■□□□□ 0.96
CHD3-214ENST00000572579 GH1P01241 217 aa21.04■□□□□ 0.96
CHD3-214ENST00000572579 FAM47CQ5HY64 1035 aa21.04■□□□□ 0.96
CHD3-214ENST00000572579 VSIG10LQ86VR7 867 aa21.04■□□□□ 0.96
CHD3-214ENST00000572579 MAFAQ8NHW3 353 aaPredicted RBP21.04■□□□□ 0.96
CHD3-214ENST00000572579 CUL9Q8IWT3 2517 aa21.04■□□□□ 0.96
CHD3-214ENST00000572579 SUPT20HL2P0C7V6 817 aa21.03■□□□□ 0.96
CHD3-214ENST00000572579 RABGGTBP53611 331 aa21.03■□□□□ 0.96
CHD3-214ENST00000572579 RALYLQ86SE5 291 aaKnown RBP21.03■□□□□ 0.96
CHD3-214ENST00000572579 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.03■□□□□ 0.96
CHD3-214ENST00000572579 EMID1Q96A84 441 aaPredicted RBP21.03■□□□□ 0.96
CHD3-214ENST00000572579 PNMA6FA0A0J9YX94 578 aa21.02■□□□□ 0.96
CHD3-214ENST00000572579 IQCF3P0C7M6 154 aa21.02■□□□□ 0.96
CHD3-214ENST00000572579 MYCLP12524 364 aaPredicted RBP21.02■□□□□ 0.96
CHD3-214ENST00000572579 MYOGP15173 224 aa21.02■□□□□ 0.96
CHD3-214ENST00000572579 FOSL2P15408 326 aa21.02■□□□□ 0.96
CHD3-214ENST00000572579 HIC1Q14526 733 aa21.02■□□□□ 0.96
CHD3-214ENST00000572579 PGM5Q15124 567 aa21.02■□□□□ 0.96
CHD3-214ENST00000572579 BRDTQ58F21 947 aaPredicted RBP21.02■□□□□ 0.96
CHD3-214ENST00000572579 GDF6Q6KF10 455 aaPredicted RBP21.02■□□□□ 0.96
CHD3-214ENST00000572579 USP38Q8NB14 1042 aa21.02■□□□□ 0.96
CHD3-214ENST00000572579 PIBF1Q8WXW3 757 aa21.02■□□□□ 0.96
CHD3-214ENST00000572579 DHX38Q92620 1227 aaKnown RBP21.02■□□□□ 0.96
CHD3-214ENST00000572579 ESYT1Q9BSJ8 1104 aa21.02■□□□□ 0.96
CHD3-214ENST00000572579 BAZ2BQ9UIF8 2168 aaKnown RBP21.02■□□□□ 0.95
CHD3-214ENST00000572579 SLC27A2O14975 620 aa21.01■□□□□ 0.95
CHD3-214ENST00000572579 SORBS3O60504 671 aa21.01■□□□□ 0.95
CHD3-214ENST00000572579 CHMP4BP1P59074 171 aa21.01■□□□□ 0.95
CHD3-214ENST00000572579 PTPN11Q06124 597 aaPredicted RBP21.01■□□□□ 0.95
CHD3-214ENST00000572579 NECTIN1Q15223 517 aa21.01■□□□□ 0.95
CHD3-214ENST00000572579 MYSM1Q5VVJ2 828 aa21.01■□□□□ 0.95
CHD3-214ENST00000572579 DEFB128Q7Z7B8 93 aa21.01■□□□□ 0.95
CHD3-214ENST00000572579 SESTD1Q86VW0 696 aa21.01■□□□□ 0.95
CHD3-214ENST00000572579 MAP3K20Q9NYL2 800 aaKnown RBP21.01■□□□□ 0.95
CHD3-214ENST00000572579 MRVI1Q9Y6F6 885 aa21.01■□□□□ 0.95
CHD3-214ENST00000572579 ERICH2A1L162 156 aa21■□□□□ 0.95
CHD3-214ENST00000572579 HAS3O00219 553 aa21■□□□□ 0.95
CHD3-214ENST00000572579 PRC1O43663 620 aa21■□□□□ 0.95
CHD3-214ENST00000572579 HOXD8P13378 290 aaPredicted RBP21■□□□□ 0.95
CHD3-214ENST00000572579 ADGRE1Q14246 886 aa21■□□□□ 0.95
CHD3-214ENST00000572579 CATIPQ7Z7H3 387 aa21■□□□□ 0.95
CHD3-214ENST00000572579 FCHSD1Q86WN1 690 aa21■□□□□ 0.95
CHD3-214ENST00000572579 RPUSD2Q8IZ73 545 aaKnown RBP21■□□□□ 0.95
CHD3-214ENST00000572579 ZNF654Q8IZM8 581 aa21■□□□□ 0.95
CHD3-214ENST00000572579 COL25A1Q9BXS0 654 aaPredicted RBP21■□□□□ 0.95
CHD3-214ENST00000572579 NKX2-4Q9H2Z4 354 aa21■□□□□ 0.95
CHD3-214ENST00000572579 TELO2Q9Y4R8 837 aa21■□□□□ 0.95
CHD3-214ENST00000572579 GCOM1H8Y6P7 765 aaPredicted RBP20.99■□□□□ 0.95
CHD3-214ENST00000572579 SH2B2O14492 632 aaPredicted RBP20.99■□□□□ 0.95
CHD3-214ENST00000572579 PLEKHA8P1O95397 391 aa20.99■□□□□ 0.95
CHD3-214ENST00000572579 POLR2MP0CAP2 368 aa20.99■□□□□ 0.95
CHD3-214ENST00000572579 MRPS9P82933 396 aaKnown RBP20.99■□□□□ 0.95
CHD3-214ENST00000572579 ZNF200P98182 395 aaPredicted RBP20.99■□□□□ 0.95
CHD3-214ENST00000572579 LAMC2Q13753 1193 aa20.99■□□□□ 0.95
CHD3-214ENST00000572579 HSDL1Q3SXM5 330 aa20.99■□□□□ 0.95
CHD3-214ENST00000572579 CELF3Q5SZQ8 465 aaKnown RBP20.99■□□□□ 0.95
CHD3-214ENST00000572579 CREB3L3Q68CJ9 461 aa20.99■□□□□ 0.95
CHD3-214ENST00000572579 CMTR1Q8N1G2 835 aaKnown RBP20.99■□□□□ 0.95
CHD3-214ENST00000572579 SRBD1Q8N5C6 995 aaKnown RBP20.99■□□□□ 0.95
CHD3-214ENST00000572579 SAMD3Q8N6K7 520 aa20.99■□□□□ 0.95
CHD3-214ENST00000572579 PPTC7Q8NI37 304 aa20.99■□□□□ 0.95
CHD3-214ENST00000572579 WNT8BQ93098 351 aa20.99■□□□□ 0.95
CHD3-214ENST00000572579 PRDM12Q9H4Q4 367 aa20.99■□□□□ 0.95
CHD3-214ENST00000572579 HDAC6Q9UBN7 1215 aa20.99■□□□□ 0.95
CHD3-214ENST00000572579 PITPNM1O00562 1244 aa20.98■□□□□ 0.95
CHD3-214ENST00000572579 ZNF286BP0CG31 522 aa20.98■□□□□ 0.95
CHD3-214ENST00000572579 RXRAP19793 462 aa20.98■□□□□ 0.95
CHD3-214ENST00000572579 CASTP20810 708 aaKnown RBP20.98■□□□□ 0.95
CHD3-214ENST00000572579 SEMA3FQ13275 785 aa20.98■□□□□ 0.95
CHD3-214ENST00000572579 SART3Q15020 963 aaKnown RBP20.98■□□□□ 0.95
CHD3-214ENST00000572579 PTGISQ16647 500 aa20.98■□□□□ 0.95
CHD3-214ENST00000572579 DGKDQ16760 1214 aa20.98■□□□□ 0.95
CHD3-214ENST00000572579 TCTN1Q2MV58 587 aa20.98■□□□□ 0.95
CHD3-214ENST00000572579 MAP3K14Q99558 947 aa20.98■□□□□ 0.95
CHD3-214ENST00000572579 LRRC2Q9BYS8 371 aa20.98■□□□□ 0.95
CHD3-214ENST00000572579 F2P00734 622 aa20.97■□□□□ 0.95
CHD3-214ENST00000572579 UBA1P22314 1058 aaKnown RBP20.97■□□□□ 0.95
CHD3-214ENST00000572579 PSEN2P49810 448 aa20.97■□□□□ 0.95
CHD3-214ENST00000572579 TRAF7Q6Q0C0 670 aa20.97■□□□□ 0.95
CHD3-214ENST00000572579 RAB11FIP4Q86YS3 637 aa20.97■□□□□ 0.95
CHD3-214ENST00000572579 DHX37Q8IY37 1157 aaKnown RBP20.97■□□□□ 0.95
CHD3-214ENST00000572579 C16orf70Q9BSU1 422 aa20.97■□□□□ 0.95
CHD3-214ENST00000572579 SPZ1Q9BXG8 430 aa20.97■□□□□ 0.95
CHD3-214ENST00000572579 PRDM6Q9NQX0 595 aa20.97■□□□□ 0.95
CHD3-214ENST00000572579 GTF2IRD1Q9UHL9 959 aa20.97■□□□□ 0.95
CHD3-214ENST00000572579 SLC4A7Q9Y6M7 1214 aa20.97■□□□□ 0.95
CHD3-214ENST00000572579 FRMPD4Q14CM0 1322 aa20.97■□□□□ 0.95
CHD3-214ENST00000572579 MEIS2O14770 477 aa20.96■□□□□ 0.95
CHD3-214ENST00000572579 DDAH1O94760 285 aa20.96■□□□□ 0.95
CHD3-214ENST00000572579 ARHGEF15O94989 841 aa20.96■□□□□ 0.95
CHD3-214ENST00000572579 GGPS1O95749 300 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms