RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 GHRHRQ02643 423 aa15.79■□□□□ 0.12
PRPF8-202ENST00000571346 COL9A3Q14050 684 aaPredicted RBP15.79■□□□□ 0.12
PRPF8-202ENST00000571346 NBPF20Q3BBV1 942 aa15.79■□□□□ 0.12
PRPF8-202ENST00000571346 RNF20Q5VTR2 975 aa15.79■□□□□ 0.12
PRPF8-202ENST00000571346 FAM109BQ6ICB4 259 aaPredicted RBP15.79■□□□□ 0.12
PRPF8-202ENST00000571346 CCDC62Q6P9F0 684 aa15.79■□□□□ 0.12
PRPF8-202ENST00000571346 IL31RAQ8NI17 732 aa15.79■□□□□ 0.12
PRPF8-202ENST00000571346 RRP36Q96EU6 259 aaKnown RBP15.79■□□□□ 0.12
PRPF8-202ENST00000571346 TMEM87BQ96K49 555 aa15.79■□□□□ 0.12
PRPF8-202ENST00000571346 PDCD2LQ9BRP1 358 aa15.79■□□□□ 0.12
PRPF8-202ENST00000571346 WNT8AQ9H1J5 351 aa15.79■□□□□ 0.12
PRPF8-202ENST00000571346 IL23AQ9NPF7 189 aa15.79■□□□□ 0.12
PRPF8-202ENST00000571346 NOD1Q9Y239 953 aa15.79■□□□□ 0.12
PRPF8-202ENST00000571346 PLEKHA8P1O95397 391 aa15.78■□□□□ 0.12
PRPF8-202ENST00000571346 SUPT20HL2P0C7V6 817 aa15.78■□□□□ 0.12
PRPF8-202ENST00000571346 CCND2P30279 289 aa15.78■□□□□ 0.12
PRPF8-202ENST00000571346 PGM5Q15124 567 aa15.78■□□□□ 0.12
PRPF8-202ENST00000571346 TMEM240Q5SV17 173 aa15.78■□□□□ 0.12
PRPF8-202ENST00000571346 MICU3Q86XE3 530 aa15.78■□□□□ 0.12
PRPF8-202ENST00000571346 SCLYQ96I15 445 aa15.78■□□□□ 0.12
PRPF8-202ENST00000571346 CCDC136Q96JN2 1154 aa15.78■□□□□ 0.12
PRPF8-202ENST00000571346 SPZ1Q9BXG8 430 aa15.78■□□□□ 0.12
PRPF8-202ENST00000571346 SLC12A7Q9Y666 1083 aa15.78■□□□□ 0.12
PRPF8-202ENST00000571346 PRUNE2Q8WUY3 3088 aa15.77■□□□□ 0.12
PRPF8-202ENST00000571346 ZNF286BP0CG31 522 aa15.77■□□□□ 0.12
PRPF8-202ENST00000571346 DNAJB2P25686 324 aa15.77■□□□□ 0.12
PRPF8-202ENST00000571346 NECTIN1Q15223 517 aa15.77■□□□□ 0.12
PRPF8-202ENST00000571346 NFRKBQ6P4R8 1299 aa15.77■□□□□ 0.12
PRPF8-202ENST00000571346 ZNF365Q70YC5 407 aa15.77■□□□□ 0.12
PRPF8-202ENST00000571346 C16orf59Q7L2K0 433 aa15.77■□□□□ 0.12
PRPF8-202ENST00000571346 CMTR1Q8N1G2 835 aaKnown RBP15.77■□□□□ 0.12
PRPF8-202ENST00000571346 SLC17A8Q8NDX2 589 aa15.77■□□□□ 0.12
PRPF8-202ENST00000571346 ZFP91Q96JP5 570 aaPredicted RBP15.77■□□□□ 0.12
PRPF8-202ENST00000571346 MAP3K14Q99558 947 aa15.77■□□□□ 0.12
PRPF8-202ENST00000571346 MTA3Q9BTC8 594 aa15.77■□□□□ 0.12
PRPF8-202ENST00000571346 MTIF3Q9H2K0 278 aaKnown RBP15.77■□□□□ 0.12
PRPF8-202ENST00000571346 MAP3K20Q9NYL2 800 aaKnown RBP15.77■□□□□ 0.12
PRPF8-202ENST00000571346 DDX41Q9UJV9 622 aaKnown RBP15.77■□□□□ 0.12
PRPF8-202ENST00000571346 CHD9Q3L8U1 2897 aa15.77■□□□□ 0.11
PRPF8-202ENST00000571346 CALM1P0DP23 149 aa15.76■□□□□ 0.11
PRPF8-202ENST00000571346 CALM2P0DP24 149 aa15.76■□□□□ 0.11
PRPF8-202ENST00000571346 CALM3P0DP25 149 aa15.76■□□□□ 0.11
PRPF8-202ENST00000571346 GNAQP50148 359 aa15.76■□□□□ 0.11
PRPF8-202ENST00000571346 DGKDQ16760 1214 aa15.76■□□□□ 0.11
PRPF8-202ENST00000571346 OTOP2Q7RTS6 562 aa15.76■□□□□ 0.11
PRPF8-202ENST00000571346 DHX37Q8IY37 1157 aaKnown RBP15.76■□□□□ 0.11
PRPF8-202ENST00000571346 SAMD3Q8N6K7 520 aa15.76■□□□□ 0.11
PRPF8-202ENST00000571346 SMARCC2Q8TAQ2 1214 aa15.76■□□□□ 0.11
PRPF8-202ENST00000571346 CUL5Q93034 780 aa15.76■□□□□ 0.11
PRPF8-202ENST00000571346 LZTS2Q9BRK4 669 aa15.76■□□□□ 0.11
PRPF8-202ENST00000571346 TTYH1Q9H313 450 aaPredicted RBP15.76■□□□□ 0.11
PRPF8-202ENST00000571346 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.75■□□□□ 0.11
PRPF8-202ENST00000571346 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.75■□□□□ 0.11
PRPF8-202ENST00000571346 hCG_1642624A0A1W2PR95 340 aa15.75■□□□□ 0.11
PRPF8-202ENST00000571346 ZBBXA8MT70 800 aa15.75■□□□□ 0.11
PRPF8-202ENST00000571346 GRXCR1A8MXD5 290 aa15.75■□□□□ 0.11
PRPF8-202ENST00000571346 RGS20O76081 388 aa15.75■□□□□ 0.11
PRPF8-202ENST00000571346 GGPS1O95749 300 aa15.75■□□□□ 0.11
PRPF8-202ENST00000571346 CASTP20810 708 aaKnown RBP15.75■□□□□ 0.11
PRPF8-202ENST00000571346 UBA1P22314 1058 aaKnown RBP15.75■□□□□ 0.11
PRPF8-202ENST00000571346 LIFRP42702 1097 aa15.75■□□□□ 0.11
PRPF8-202ENST00000571346 LAMC2Q13753 1193 aa15.75■□□□□ 0.11
PRPF8-202ENST00000571346 DEFB128Q7Z7B8 93 aa15.75■□□□□ 0.11
PRPF8-202ENST00000571346 TMTC2Q8N394 836 aa15.75■□□□□ 0.11
PRPF8-202ENST00000571346 CCDC82Q8N4S0 544 aa15.75■□□□□ 0.11
PRPF8-202ENST00000571346 SRBD1Q8N5C6 995 aaKnown RBP15.75■□□□□ 0.11
PRPF8-202ENST00000571346 PPTC7Q8NI37 304 aa15.75■□□□□ 0.11
PRPF8-202ENST00000571346 TIFAQ96CG3 184 aa15.75■□□□□ 0.11
PRPF8-202ENST00000571346 TCEANC2Q96MN5 208 aa15.75■□□□□ 0.11
PRPF8-202ENST00000571346 SPATA33Q96N06 139 aa15.75■□□□□ 0.11
PRPF8-202ENST00000571346 CDX2Q99626 313 aaPredicted RBP15.75■□□□□ 0.11
PRPF8-202ENST00000571346 SEMA6BQ9H3T3 888 aa15.75■□□□□ 0.11
PRPF8-202ENST00000571346 CXXC1Q9P0U4 656 aaPredicted RBP15.75■□□□□ 0.11
PRPF8-202ENST00000571346 SCN5AQ14524 2016 aa15.75■□□□□ 0.11
PRPF8-202ENST00000571346 MYH7BA7E2Y1 1941 aa15.74■□□□□ 0.11
PRPF8-202ENST00000571346 FGBP02675 491 aa15.74■□□□□ 0.11
PRPF8-202ENST00000571346 PTPN11Q06124 597 aaPredicted RBP15.74■□□□□ 0.11
PRPF8-202ENST00000571346 PTGISQ16647 500 aa15.74■□□□□ 0.11
PRPF8-202ENST00000571346 GNPTABQ3T906 1256 aa15.74■□□□□ 0.11
PRPF8-202ENST00000571346 KCNV1Q6PIU1 500 aa15.74■□□□□ 0.11
PRPF8-202ENST00000571346 USP17L6PQ6QN14 398 aa15.74■□□□□ 0.11
PRPF8-202ENST00000571346 SYNE3Q6ZMZ3 975 aa15.74■□□□□ 0.11
PRPF8-202ENST00000571346 VSIG10LQ86VR7 867 aa15.74■□□□□ 0.11
PRPF8-202ENST00000571346 MYLIPQ8WY64 445 aa15.74■□□□□ 0.11
PRPF8-202ENST00000571346 GPKOWQ92917 476 aaPredicted RBP eCLIP15.74■□□□□ 0.11
PRPF8-202ENST00000571346 EMID1Q96A84 441 aaPredicted RBP15.74■□□□□ 0.11
PRPF8-202ENST00000571346 NEK1Q96PY6 1258 aa15.74■□□□□ 0.11
PRPF8-202ENST00000571346 ALG1Q9BT22 464 aa15.74■□□□□ 0.11
PRPF8-202ENST00000571346 KATNAL1Q9BW62 490 aa15.74■□□□□ 0.11
PRPF8-202ENST00000571346 GBF1Q92538 1859 aa15.74■□□□□ 0.11
PRPF8-202ENST00000571346 FRMPD4Q14CM0 1322 aa15.73■□□□□ 0.11
PRPF8-202ENST00000571346 TMEM265A0A087WTH1 108 aa15.73■□□□□ 0.11
PRPF8-202ENST00000571346 FOSL2P15408 326 aa15.73■□□□□ 0.11
PRPF8-202ENST00000571346 PBX2P40425 430 aa15.73■□□□□ 0.11
PRPF8-202ENST00000571346 MFSD10Q14728 455 aa15.73■□□□□ 0.11
PRPF8-202ENST00000571346 RASIP1Q5U651 963 aa15.73■□□□□ 0.11
PRPF8-202ENST00000571346 TMTC3Q6ZXV5 915 aa15.73■□□□□ 0.11
PRPF8-202ENST00000571346 HEATR3Q7Z4Q2 680 aa15.73■□□□□ 0.11
PRPF8-202ENST00000571346 RPUSD2Q8IZ73 545 aaKnown RBP15.73■□□□□ 0.11
PRPF8-202ENST00000571346 CCDC155Q8N6L0 562 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms