RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 ITIH3Q06033 890 aa19.34■□□□□ 0.69
SCARF1-205ENST00000571272 KCTD16Q68DU8 428 aa19.34■□□□□ 0.69
SCARF1-205ENST00000571272 ZNF572Q7Z3I7 529 aaPredicted RBP19.34■□□□□ 0.69
SCARF1-205ENST00000571272 NLRP3Q96P20 1036 aa19.34■□□□□ 0.69
SCARF1-205ENST00000571272 COL22A1Q8NFW1 1626 aaPredicted RBP19.34■□□□□ 0.69
SCARF1-205ENST00000571272 LAMB2P55268 1798 aa19.34■□□□□ 0.69
SCARF1-205ENST00000571272 RREB1Q92766 1687 aa19.34■□□□□ 0.69
SCARF1-205ENST00000571272 ESYT3A0FGR9 886 aa19.34■□□□□ 0.69
SCARF1-205ENST00000571272 POTEMA6NI47 508 aa19.34■□□□□ 0.69
SCARF1-205ENST00000571272 UNC13DQ70J99 1090 aa19.34■□□□□ 0.69
SCARF1-205ENST00000571272 MICALL1Q8N3F8 863 aa19.34■□□□□ 0.69
SCARF1-205ENST00000571272 LARP4BQ92615 738 aaKnown RBP19.34■□□□□ 0.69
SCARF1-205ENST00000571272 PNMA5Q96PV4 448 aa19.34■□□□□ 0.69
SCARF1-205ENST00000571272 ZSCAN5CA6NGD5 496 aaPredicted RBP19.33■□□□□ 0.69
SCARF1-205ENST00000571272 LCA5LO95447 670 aa19.33■□□□□ 0.69
SCARF1-205ENST00000571272 TTMPQ5BVD1 217 aa19.33■□□□□ 0.69
SCARF1-205ENST00000571272 KLHDC7AQ5VTJ3 777 aa19.33■□□□□ 0.69
SCARF1-205ENST00000571272 EFCAB13Q8IY85 973 aa19.33■□□□□ 0.69
SCARF1-205ENST00000571272 NUDT12Q9BQG2 462 aa19.33■□□□□ 0.69
SCARF1-205ENST00000571272 SEC63Q9UGP8 760 aaKnown RBP19.33■□□□□ 0.69
SCARF1-205ENST00000571272 GOLGA8KD6RF30 607 aa19.33■□□□□ 0.68
SCARF1-205ENST00000571272 EBAG9O00559 213 aa19.33■□□□□ 0.68
SCARF1-205ENST00000571272 SPTY2D1Q68D10 685 aaPredicted RBP19.33■□□□□ 0.68
SCARF1-205ENST00000571272 SH2D3CQ8N5H7 860 aa19.33■□□□□ 0.68
SCARF1-205ENST00000571272 IQCDQ96DY2 449 aa19.33■□□□□ 0.68
SCARF1-205ENST00000571272 SH3GL2Q99962 352 aa19.33■□□□□ 0.68
SCARF1-205ENST00000571272 ANKRD2Q9GZV1 360 aa19.33■□□□□ 0.68
SCARF1-205ENST00000571272 OPA1O60313 960 aa19.32■□□□□ 0.68
SCARF1-205ENST00000571272 HSF2BPO75031 334 aa19.32■□□□□ 0.68
SCARF1-205ENST00000571272 RNASE9P60153 205 aaKnown RBP19.32■□□□□ 0.68
SCARF1-205ENST00000571272 CALCRLQ16602 461 aa19.32■□□□□ 0.68
SCARF1-205ENST00000571272 REXO1Q8N1G1 1221 aaKnown RBP19.32■□□□□ 0.68
SCARF1-205ENST00000571272 IFT81Q8WYA0 676 aa19.32■□□□□ 0.68
SCARF1-205ENST00000571272 NOX5Q96PH1 765 aa19.32■□□□□ 0.68
SCARF1-205ENST00000571272 SPZ1Q9BXG8 430 aa19.32■□□□□ 0.68
SCARF1-205ENST00000571272 KANSL2Q9H9L4 492 aa19.32■□□□□ 0.68
SCARF1-205ENST00000571272 SAMM50Q9Y512 469 aa19.32■□□□□ 0.68
SCARF1-205ENST00000571272 GRIN2DO15399 1336 aa19.32■□□□□ 0.68
SCARF1-205ENST00000571272 EIF3HO15372 352 aaKnown RBP eCLIP19.32■□□□□ 0.68
SCARF1-205ENST00000571272 SLC37A4O43826 429 aa19.32■□□□□ 0.68
SCARF1-205ENST00000571272 KRT14P02533 472 aa19.32■□□□□ 0.68
SCARF1-205ENST00000571272 GLI1P08151 1106 aa19.32■□□□□ 0.68
SCARF1-205ENST00000571272 LIG3P49916 1009 aa19.32■□□□□ 0.68
SCARF1-205ENST00000571272 ENOX2Q16206 610 aaKnown RBP19.32■□□□□ 0.68
SCARF1-205ENST00000571272 PDXDC1Q6P996 788 aa19.32■□□□□ 0.68
SCARF1-205ENST00000571272 EMBQ6PCB8 327 aa19.32■□□□□ 0.68
SCARF1-205ENST00000571272 TADA2BQ86TJ2 420 aa19.32■□□□□ 0.68
SCARF1-205ENST00000571272 LZTS2Q9BRK4 669 aa19.32■□□□□ 0.68
SCARF1-205ENST00000571272 TDP2O95551 362 aa19.31■□□□□ 0.68
SCARF1-205ENST00000571272 CARSP49589 748 aaKnown RBP19.31■□□□□ 0.68
SCARF1-205ENST00000571272 ATP1A2P50993 1020 aa19.31■□□□□ 0.68
SCARF1-205ENST00000571272 APBA1Q02410 837 aa19.31■□□□□ 0.68
SCARF1-205ENST00000571272 KCNMA1Q12791 1236 aa19.31■□□□□ 0.68
SCARF1-205ENST00000571272 COBLL1Q53SF7 1204 aa19.31■□□□□ 0.68
SCARF1-205ENST00000571272 LRRC55Q6ZSA7 311 aa19.31■□□□□ 0.68
SCARF1-205ENST00000571272 KCNK18Q7Z418 384 aa19.31■□□□□ 0.68
SCARF1-205ENST00000571272 GUF1Q8N442 669 aaKnown RBP19.31■□□□□ 0.68
SCARF1-205ENST00000571272 LINC00116Q8NCU8 138 aa19.31■□□□□ 0.68
SCARF1-205ENST00000571272 ZIM3Q96PE6 472 aa19.31■□□□□ 0.68
SCARF1-205ENST00000571272 EYA3Q99504 573 aa19.31■□□□□ 0.68
SCARF1-205ENST00000571272 NFU1Q9UMS0 254 aa19.31■□□□□ 0.68
SCARF1-205ENST00000571272 FAM169AQ9Y6X4 670 aa19.31■□□□□ 0.68
SCARF1-205ENST00000571272 ASTE1Q2TB18 679 aaPredicted RBP19.31■□□□□ 0.68
SCARF1-205ENST00000571272 HGSNATQ68CP4 663 aa19.31■□□□□ 0.68
SCARF1-205ENST00000571272 NBPF5PQ86XG9 351 aaPredicted RBP19.31■□□□□ 0.68
SCARF1-205ENST00000571272 DDX12PQ92771 950 aa19.31■□□□□ 0.68
SCARF1-205ENST00000571272 FTCDO95954 541 aa19.3■□□□□ 0.68
SCARF1-205ENST00000571272 FAM153BP0C7A2 387 aa19.3■□□□□ 0.68
SCARF1-205ENST00000571272 ARID5AQ03989 594 aa19.3■□□□□ 0.68
SCARF1-205ENST00000571272 PDCLQ13371 301 aa19.3■□□□□ 0.68
SCARF1-205ENST00000571272 FAM153CQ494X1 144 aa19.3■□□□□ 0.68
SCARF1-205ENST00000571272 GPR101Q96P66 508 aaPredicted RBP19.3■□□□□ 0.68
SCARF1-205ENST00000571272 SRP68Q9UHB9 627 aaKnown RBP19.3■□□□□ 0.68
SCARF1-205ENST00000571272 FAM153AQ9UHL3 310 aa19.3■□□□□ 0.68
SCARF1-205ENST00000571272 PACSIN2Q9UNF0 486 aaPredicted RBP19.3■□□□□ 0.68
SCARF1-205ENST00000571272 A0A087WUV0 522 aaPredicted RBP19.3■□□□□ 0.68
SCARF1-205ENST00000571272 PJA2O43164 708 aa19.3■□□□□ 0.68
SCARF1-205ENST00000571272 FGFR1OPO95684 399 aaKnown RBP19.3■□□□□ 0.68
SCARF1-205ENST00000571272 BAG3O95817 575 aa19.3■□□□□ 0.68
SCARF1-205ENST00000571272 CFAP221Q4G0U5 840 aa19.3■□□□□ 0.68
SCARF1-205ENST00000571272 SLC10A5Q5PT55 438 aa19.3■□□□□ 0.68
SCARF1-205ENST00000571272 SNX29Q8TEQ0 813 aa19.3■□□□□ 0.68
SCARF1-205ENST00000571272 GJA10Q969M2 543 aa19.3■□□□□ 0.68
SCARF1-205ENST00000571272 COA7Q96BR5 231 aa19.3■□□□□ 0.68
SCARF1-205ENST00000571272 UIMC1Q96RL1 719 aa19.3■□□□□ 0.68
SCARF1-205ENST00000571272 EPB41L5Q9HCM4 733 aa19.3■□□□□ 0.68
SCARF1-205ENST00000571272 ANKIB1Q9P2G1 1089 aa19.3■□□□□ 0.68
SCARF1-205ENST00000571272 PVALEFA0A1B0GWK0 134 aa19.3■□□□□ 0.68
SCARF1-205ENST00000571272 SHTN1A0MZ66 631 aa19.3■□□□□ 0.68
SCARF1-205ENST00000571272 CDK8P49336 464 aa19.3■□□□□ 0.68
SCARF1-205ENST00000571272 GUCY2DQ02846 1103 aa19.3■□□□□ 0.68
SCARF1-205ENST00000571272 MTMR9Q96QG7 549 aa19.3■□□□□ 0.68
SCARF1-205ENST00000571272 TBC1D7Q9P0N9 293 aa19.3■□□□□ 0.68
SCARF1-205ENST00000571272 PALMO75781 387 aa19.29■□□□□ 0.68
SCARF1-205ENST00000571272 GUCY2FP51841 1108 aa19.29■□□□□ 0.68
SCARF1-205ENST00000571272 LRRC63Q05C16 580 aa19.29■□□□□ 0.68
SCARF1-205ENST00000571272 ALS2CLQ60I27 953 aa19.29■□□□□ 0.68
SCARF1-205ENST00000571272 CCDC43Q96MW1 224 aaKnown RBP19.29■□□□□ 0.68
SCARF1-205ENST00000571272 FRMPD2Q68DX3 1309 aaPredicted RBP19.29■□□□□ 0.68
SCARF1-205ENST00000571272 CCDC88AQ3V6T2 1871 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms