RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 CTCFLQ8NI51 663 aaPredicted RBP24.91■■□□□ 1.58
UBFD1-210ENST00000571064 SLC38A10Q9HBR0 1119 aa24.91■■□□□ 1.58
UBFD1-210ENST00000571064 NAP1L2Q9ULW6 460 aaPredicted RBP24.91■■□□□ 1.58
UBFD1-210ENST00000571064 REV3LO60673 3130 aa24.91■■□□□ 1.58
UBFD1-210ENST00000571064 NID2Q14112 1375 aa24.91■■□□□ 1.58
UBFD1-210ENST00000571064 ASTN1O14525 1302 aa24.9■■□□□ 1.58
UBFD1-210ENST00000571064 BAZ2BQ9UIF8 2168 aaKnown RBP24.9■■□□□ 1.58
UBFD1-210ENST00000571064 CYTH3O43739 400 aa24.9■■□□□ 1.58
UBFD1-210ENST00000571064 HOXD11P31277 338 aaPredicted RBP24.9■■□□□ 1.58
UBFD1-210ENST00000571064 RCAN1P53805 252 aa24.9■■□□□ 1.58
UBFD1-210ENST00000571064 NKX3-2P78367 333 aa24.9■■□□□ 1.58
UBFD1-210ENST00000571064 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.9■■□□□ 1.58
UBFD1-210ENST00000571064 ADGRF4Q8IZF3 695 aa24.9■■□□□ 1.58
UBFD1-210ENST00000571064 ZNF274Q96GC6 653 aaPredicted RBP24.9■■□□□ 1.58
UBFD1-210ENST00000571064 JMJD4Q9H9V9 463 aa24.9■■□□□ 1.58
UBFD1-210ENST00000571064 CTDP1Q9Y5B0 961 aaPredicted RBP24.9■■□□□ 1.58
UBFD1-210ENST00000571064 GOLGA8AA7E2F4 631 aa24.89■■□□□ 1.58
UBFD1-210ENST00000571064 SKIV2LQ15477 1246 aaKnown RBP24.89■■□□□ 1.58
UBFD1-210ENST00000571064 RTN1Q16799 776 aa24.89■■□□□ 1.58
UBFD1-210ENST00000571064 NOL8Q76FK4 1167 aaKnown RBP24.89■■□□□ 1.58
UBFD1-210ENST00000571064 CMTR1Q8N1G2 835 aaKnown RBP24.89■■□□□ 1.58
UBFD1-210ENST00000571064 SRBD1Q8N5C6 995 aaKnown RBP24.89■■□□□ 1.58
UBFD1-210ENST00000571064 NOC4LQ9BVI4 516 aaKnown RBP24.89■■□□□ 1.58
UBFD1-210ENST00000571064 TRPV6Q9H1D0 765 aa24.89■■□□□ 1.58
UBFD1-210ENST00000571064 WNT8AQ9H1J5 351 aa24.89■■□□□ 1.58
UBFD1-210ENST00000571064 RANBP17Q9H2T7 1088 aaKnown RBP24.89■■□□□ 1.58
UBFD1-210ENST00000571064 SLC4A7Q9Y6M7 1214 aa24.89■■□□□ 1.58
UBFD1-210ENST00000571064 ZNF536O15090 1300 aa24.88■■□□□ 1.57
UBFD1-210ENST00000571064 GRIN2DO15399 1336 aa24.88■■□□□ 1.57
UBFD1-210ENST00000571064 LARGE1O95461 756 aa24.88■■□□□ 1.57
UBFD1-210ENST00000571064 PTGS1P23219 599 aa24.88■■□□□ 1.57
UBFD1-210ENST00000571064 KIF5BP33176 963 aa24.88■■□□□ 1.57
UBFD1-210ENST00000571064 CNTN2Q02246 1040 aa24.88■■□□□ 1.57
UBFD1-210ENST00000571064 TNFAIP2Q03169 654 aa24.88■■□□□ 1.57
UBFD1-210ENST00000571064 ITGA7Q13683 1181 aa24.88■■□□□ 1.57
UBFD1-210ENST00000571064 ANKRD1Q15327 319 aa24.88■■□□□ 1.57
UBFD1-210ENST00000571064 TMTC3Q6ZXV5 915 aa24.88■■□□□ 1.57
UBFD1-210ENST00000571064 RIOX1Q9H6W3 641 aa24.88■■□□□ 1.57
UBFD1-210ENST00000571064 VAT1LQ9HCJ6 419 aa24.88■■□□□ 1.57
UBFD1-210ENST00000571064 RFXAPO00287 272 aa24.87■■□□□ 1.57
UBFD1-210ENST00000571064 CD2BP2O95400 341 aaKnown RBP24.87■■□□□ 1.57
UBFD1-210ENST00000571064 ADD1P35611 737 aaKnown RBP24.87■■□□□ 1.57
UBFD1-210ENST00000571064 METAP2P50579 478 aaKnown RBP eCLIP24.87■■□□□ 1.57
UBFD1-210ENST00000571064 CCT2P78371 535 aaKnown RBP24.87■■□□□ 1.57
UBFD1-210ENST00000571064 FUT2Q10981 343 aa24.87■■□□□ 1.57
UBFD1-210ENST00000571064 CHST13Q8NET6 341 aa24.87■■□□□ 1.57
UBFD1-210ENST00000571064 VWCEQ96DN2 955 aa24.87■■□□□ 1.57
UBFD1-210ENST00000571064 MTMR8Q96EF0 704 aa24.87■■□□□ 1.57
UBFD1-210ENST00000571064 NCOA5Q9HCD5 579 aaKnown RBP24.87■■□□□ 1.57
UBFD1-210ENST00000571064 HOMER2Q9NSB8 354 aa24.87■■□□□ 1.57
UBFD1-210ENST00000571064 FBXO40Q9UH90 709 aa24.87■■□□□ 1.57
UBFD1-210ENST00000571064 PCDHA11Q9Y5I1 949 aa24.87■■□□□ 1.57
UBFD1-210ENST00000571064 ZBBXA8MT70 800 aa24.86■■□□□ 1.57
UBFD1-210ENST00000571064 B4GALT4O60513 344 aa24.86■■□□□ 1.57
UBFD1-210ENST00000571064 STK3Q13188 491 aa24.86■■□□□ 1.57
UBFD1-210ENST00000571064 ME3Q16798 604 aa24.86■■□□□ 1.57
UBFD1-210ENST00000571064 AAK1Q2M2I8 961 aa24.86■■□□□ 1.57
UBFD1-210ENST00000571064 SCLYQ96I15 445 aa24.86■■□□□ 1.57
UBFD1-210ENST00000571064 EPHX3Q9H6B9 360 aa24.86■■□□□ 1.57
UBFD1-210ENST00000571064 RBM28Q9NW13 759 aaKnown RBP24.86■■□□□ 1.57
UBFD1-210ENST00000571064 GNEQ9Y223 722 aaKnown RBP24.86■■□□□ 1.57
UBFD1-210ENST00000571064 CABYRO75952 493 aa24.85■■□□□ 1.57
UBFD1-210ENST00000571064 FDX1P10109 184 aa24.85■■□□□ 1.57
UBFD1-210ENST00000571064 SMARCA1P28370 1054 aa24.85■■□□□ 1.57
UBFD1-210ENST00000571064 GNAQP50148 359 aa24.85■■□□□ 1.57
UBFD1-210ENST00000571064 PSMC6P62333 389 aa24.85■■□□□ 1.57
UBFD1-210ENST00000571064 FSCN1Q16658 493 aaKnown RBP24.85■■□□□ 1.57
UBFD1-210ENST00000571064 TLK2Q86UE8 772 aa24.85■■□□□ 1.57
UBFD1-210ENST00000571064 LZTS2Q9BRK4 669 aa24.85■■□□□ 1.57
UBFD1-210ENST00000571064 LRFN3Q9BTN0 628 aa24.85■■□□□ 1.57
UBFD1-210ENST00000571064 SPZ1Q9BXG8 430 aa24.85■■□□□ 1.57
UBFD1-210ENST00000571064 DDX49Q9Y6V7 483 aaKnown RBP24.85■■□□□ 1.57
UBFD1-210ENST00000571064 PFKFB2O60825 505 aa24.84■■□□□ 1.57
UBFD1-210ENST00000571064 NTRK3Q16288 839 aa24.84■■□□□ 1.57
UBFD1-210ENST00000571064 CDC37Q16543 378 aaPredicted RBP24.84■■□□□ 1.57
UBFD1-210ENST00000571064 RPUSD2Q8IZ73 545 aaKnown RBP24.84■■□□□ 1.57
UBFD1-210ENST00000571064 CCDC82Q8N4S0 544 aa24.84■■□□□ 1.57
UBFD1-210ENST00000571064 FAM133AQ8N9E0 248 aa24.84■■□□□ 1.57
UBFD1-210ENST00000571064 AGBL1Q96MI9 1066 aa24.84■■□□□ 1.57
UBFD1-210ENST00000571064 PIGSQ96S52 555 aa24.84■■□□□ 1.57
UBFD1-210ENST00000571064 DYNC1LI2O43237 492 aaPredicted RBP24.83■■□□□ 1.57
UBFD1-210ENST00000571064 DHX16O60231 1041 aaKnown RBP24.83■■□□□ 1.57
UBFD1-210ENST00000571064 ATP2A2P16615 1042 aaKnown RBP24.83■■□□□ 1.57
UBFD1-210ENST00000571064 OAZ1P54368 228 aa24.83■■□□□ 1.57
UBFD1-210ENST00000571064 SCRN1Q12765 414 aa24.83■■□□□ 1.57
UBFD1-210ENST00000571064 PPP2R5BQ15173 497 aa24.83■■□□□ 1.57
UBFD1-210ENST00000571064 QRICH1Q2TAL8 776 aa24.83■■□□□ 1.57
UBFD1-210ENST00000571064 NECAB1Q8N987 351 aa24.83■■□□□ 1.57
UBFD1-210ENST00000571064 CERS4Q9HA82 394 aa24.83■■□□□ 1.57
UBFD1-210ENST00000571064 LIMCH1Q9UPQ0 1083 aa24.83■■□□□ 1.57
UBFD1-210ENST00000571064 MTCH2Q9Y6C9 303 aa24.83■■□□□ 1.57
UBFD1-210ENST00000571064 PRRC2BQ5JSZ5 2229 aaKnown RBP24.83■■□□□ 1.57
UBFD1-210ENST00000571064 CNTNAP5Q8WYK1 1306 aa24.83■■□□□ 1.56
UBFD1-210ENST00000571064 MYH6P13533 1939 aa24.82■■□□□ 1.56
UBFD1-210ENST00000571064 SOWAHBA6NEL2 793 aa24.82■■□□□ 1.56
UBFD1-210ENST00000571064 PPP1R11O60927 126 aaPredicted RBP24.82■■□□□ 1.56
UBFD1-210ENST00000571064 SMPD1P17405 629 aa24.82■■□□□ 1.56
UBFD1-210ENST00000571064 ST3GAL1Q11201 340 aa24.82■■□□□ 1.56
UBFD1-210ENST00000571064 TTLL4Q14679 1199 aa24.82■■□□□ 1.56
UBFD1-210ENST00000571064 KRT40Q6A162 431 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms