RNA–Protein interactions for RNA: ENST00000570403.1

TRAP1-203, Transcript of TNF receptor associated protein 1, humanhuman

TSL 4

Gene TRAP1, Length 521 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-203ENST00000570403 SNX14Q9Y5W7 946 aa26.2■■□□□ 1.78
TRAP1-203ENST00000570403 TLR3O15455 904 aaKnown RBP26.19■■□□□ 1.78
TRAP1-203ENST00000570403 MYL3P08590 195 aa26.19■■□□□ 1.78
TRAP1-203ENST00000570403 HMGB1P09429 215 aaKnown RBP26.19■■□□□ 1.78
TRAP1-203ENST00000570403 ARHGAP1Q07960 439 aa26.19■■□□□ 1.78
TRAP1-203ENST00000570403 BRDTQ58F21 947 aaPredicted RBP26.19■■□□□ 1.78
TRAP1-203ENST00000570403 C9orf50Q5SZB4 431 aa26.19■■□□□ 1.78
TRAP1-203ENST00000570403 VSIG10LQ86VR7 867 aa26.19■■□□□ 1.78
TRAP1-203ENST00000570403 CNTNAP5Q8WYK1 1306 aa26.18■■□□□ 1.78
TRAP1-203ENST00000570403 TIMP1P01033 207 aa26.18■■□□□ 1.78
TRAP1-203ENST00000570403 GH1P01241 217 aa26.18■■□□□ 1.78
TRAP1-203ENST00000570403 MYCLP12524 364 aaPredicted RBP26.18■■□□□ 1.78
TRAP1-203ENST00000570403 CPA1P15085 419 aa26.18■■□□□ 1.78
TRAP1-203ENST00000570403 SHHQ15465 462 aa26.18■■□□□ 1.78
TRAP1-203ENST00000570403 SYNE3Q6ZMZ3 975 aa26.18■■□□□ 1.78
TRAP1-203ENST00000570403 MTG1Q9BT17 334 aaPredicted RBP26.18■■□□□ 1.78
TRAP1-203ENST00000570403 DDX41Q9UJV9 622 aaKnown RBP26.18■■□□□ 1.78
TRAP1-203ENST00000570403 B4GALT4O60513 344 aa26.17■■□□□ 1.78
TRAP1-203ENST00000570403 EPHB4P54760 987 aa26.17■■□□□ 1.78
TRAP1-203ENST00000570403 CCDC82Q8N4S0 544 aa26.17■■□□□ 1.78
TRAP1-203ENST00000570403 AFG1LQ8WV93 481 aa26.17■■□□□ 1.78
TRAP1-203ENST00000570403 JAKMIP1Q96N16 626 aaKnown RBP26.17■■□□□ 1.78
TRAP1-203ENST00000570403 MRVI1Q9Y6F6 885 aa26.17■■□□□ 1.78
TRAP1-203ENST00000570403 hCG_1642624A0A1W2PR95 340 aa26.16■■□□□ 1.78
TRAP1-203ENST00000570403 PIK3CDO00329 1044 aa26.16■■□□□ 1.78
TRAP1-203ENST00000570403 MEIS2O14770 477 aa26.16■■□□□ 1.78
TRAP1-203ENST00000570403 ZBTB43O43298 467 aa26.16■■□□□ 1.78
TRAP1-203ENST00000570403 KPNA6O60684 536 aa26.16■■□□□ 1.78
TRAP1-203ENST00000570403 MMP3P08254 477 aa26.16■■□□□ 1.78
TRAP1-203ENST00000570403 CCND2P30279 289 aa26.16■■□□□ 1.78
TRAP1-203ENST00000570403 FPGSQ05932 587 aa26.16■■□□□ 1.78
TRAP1-203ENST00000570403 EMID1Q96A84 441 aaPredicted RBP26.16■■□□□ 1.78
TRAP1-203ENST00000570403 RBM28Q9NW13 759 aaKnown RBP26.16■■□□□ 1.78
TRAP1-203ENST00000570403 KLF18A0A0U1RQI7 1052 aa26.15■■□□□ 1.78
TRAP1-203ENST00000570403 FUT2Q10981 343 aa26.15■■□□□ 1.78
TRAP1-203ENST00000570403 RTN1Q16799 776 aa26.15■■□□□ 1.78
TRAP1-203ENST00000570403 USP17L6PQ6QN14 398 aa26.15■■□□□ 1.78
TRAP1-203ENST00000570403 TRPV6Q9H1D0 765 aa26.15■■□□□ 1.78
TRAP1-203ENST00000570403 ALDH8A1Q9H2A2 487 aaPredicted RBP26.15■■□□□ 1.78
TRAP1-203ENST00000570403 TANC1Q9C0D5 1861 aa26.15■■□□□ 1.78
TRAP1-203ENST00000570403 RCAN1P53805 252 aa26.14■■□□□ 1.78
TRAP1-203ENST00000570403 MFSD5Q6N075 450 aa26.14■■□□□ 1.78
TRAP1-203ENST00000570403 GPR153Q6NV75 609 aa26.14■■□□□ 1.78
TRAP1-203ENST00000570403 ZFP91Q96JP5 570 aaPredicted RBP26.14■■□□□ 1.78
TRAP1-203ENST00000570403 PPP1R12CQ9BZL4 782 aa26.14■■□□□ 1.78
TRAP1-203ENST00000570403 MRPS9P82933 396 aaKnown RBP26.13■■□□□ 1.77
TRAP1-203ENST00000570403 NBPF20Q3BBV1 942 aa26.13■■□□□ 1.77
TRAP1-203ENST00000570403 BLOC1S2Q6QNY1 142 aa26.13■■□□□ 1.77
TRAP1-203ENST00000570403 SMARCC2Q8TAQ2 1214 aa26.13■■□□□ 1.77
TRAP1-203ENST00000570403 CUL5Q93034 780 aa26.13■■□□□ 1.77
TRAP1-203ENST00000570403 FAM217BQ9NTX9 383 aaPredicted RBP26.13■■□□□ 1.77
TRAP1-203ENST00000570403 GOLGA8AA7E2F4 631 aa26.12■■□□□ 1.77
TRAP1-203ENST00000570403 GOLGA8BA8MQT2 603 aa26.12■■□□□ 1.77
TRAP1-203ENST00000570403 CDC27P30260 824 aa26.12■■□□□ 1.77
TRAP1-203ENST00000570403 KCNV1Q6PIU1 500 aa26.12■■□□□ 1.77
TRAP1-203ENST00000570403 Q6ZUG5 572 aa26.12■■□□□ 1.77
TRAP1-203ENST00000570403 GPKOWQ92917 476 aaPredicted RBP eCLIP26.12■■□□□ 1.77
TRAP1-203ENST00000570403 USP26Q9BXU7 913 aa26.12■■□□□ 1.77
TRAP1-203ENST00000570403 TRMT13Q9NUP7 481 aaKnown RBP26.12■■□□□ 1.77
TRAP1-203ENST00000570403 UMODL1Q5DID0 1318 aa26.12■■□□□ 1.77
TRAP1-203ENST00000570403 TRIP12Q14669 1992 aaPredicted RBP26.11■■□□□ 1.77
TRAP1-203ENST00000570403 NID2Q14112 1375 aa26.11■■□□□ 1.77
TRAP1-203ENST00000570403 SCN5AQ14524 2016 aa26.11■■□□□ 1.77
TRAP1-203ENST00000570403 UBA1P22314 1058 aaKnown RBP26.11■■□□□ 1.77
TRAP1-203ENST00000570403 RPS6KB1P23443 525 aa26.11■■□□□ 1.77
TRAP1-203ENST00000570403 CYP2C18P33260 490 aa26.11■■□□□ 1.77
TRAP1-203ENST00000570403 NFRKBQ6P4R8 1299 aa26.11■■□□□ 1.77
TRAP1-203ENST00000570403 HEATR3Q7Z4Q2 680 aa26.11■■□□□ 1.77
TRAP1-203ENST00000570403 FBXL16Q8N461 479 aa26.11■■□□□ 1.77
TRAP1-203ENST00000570403 PPTC7Q8NI37 304 aa26.11■■□□□ 1.77
TRAP1-203ENST00000570403 PPP1R13LQ8WUF5 828 aa26.11■■□□□ 1.77
TRAP1-203ENST00000570403 BRF1Q92994 677 aa26.11■■□□□ 1.77
TRAP1-203ENST00000570403 INPP4AQ96PE3 977 aaPredicted RBP26.11■■□□□ 1.77
TRAP1-203ENST00000570403 NOC4LQ9BVI4 516 aaKnown RBP26.11■■□□□ 1.77
TRAP1-203ENST00000570403 AGXT2Q9BYV1 514 aa26.11■■□□□ 1.77
TRAP1-203ENST00000570403 HIPK3Q9H422 1215 aa26.11■■□□□ 1.77
TRAP1-203ENST00000570403 PSTPIP2Q9H939 334 aa26.11■■□□□ 1.77
TRAP1-203ENST00000570403 COL6A3P12111 3177 aa26.1■■□□□ 1.77
TRAP1-203ENST00000570403 STAM2O75886 525 aa26.1■■□□□ 1.77
TRAP1-203ENST00000570403 TGFB3P10600 412 aa26.1■■□□□ 1.77
TRAP1-203ENST00000570403 CSF2RAP15509 400 aa26.1■■□□□ 1.77
TRAP1-203ENST00000570403 FGD1P98174 961 aa26.1■■□□□ 1.77
TRAP1-203ENST00000570403 SP2Q02086 613 aa26.1■■□□□ 1.77
TRAP1-203ENST00000570403 APOBRQ0VD83 1088 aa26.1■■□□□ 1.77
TRAP1-203ENST00000570403 LAMC2Q13753 1193 aa26.1■■□□□ 1.77
TRAP1-203ENST00000570403 MYSM1Q5VVJ2 828 aa26.1■■□□□ 1.77
TRAP1-203ENST00000570403 WWC2Q6AWC2 1192 aa26.1■■□□□ 1.77
TRAP1-203ENST00000570403 DHX37Q8IY37 1157 aaKnown RBP26.1■■□□□ 1.77
TRAP1-203ENST00000570403 KAT2BQ92831 832 aa26.1■■□□□ 1.77
TRAP1-203ENST00000570403 GGPS1O95749 300 aa26.09■■□□□ 1.77
TRAP1-203ENST00000570403 HOXD8P13378 290 aaPredicted RBP26.09■■□□□ 1.77
TRAP1-203ENST00000570403 CASTP20810 708 aaKnown RBP26.09■■□□□ 1.77
TRAP1-203ENST00000570403 PSMA5P28066 241 aa26.09■■□□□ 1.77
TRAP1-203ENST00000570403 SEMA3FQ13275 785 aa26.09■■□□□ 1.77
TRAP1-203ENST00000570403 PPIGQ13427 754 aaKnown RBP eCLIP26.09■■□□□ 1.771e-6■■■■□ 19.7
TRAP1-203ENST00000570403 DGKDQ16760 1214 aa26.09■■□□□ 1.77
TRAP1-203ENST00000570403 CELF3Q5SZQ8 465 aaKnown RBP26.09■■□□□ 1.77
TRAP1-203ENST00000570403 PCNX4Q63HM2 1172 aa26.09■■□□□ 1.77
TRAP1-203ENST00000570403 TYW1BQ6NUM6 668 aa26.09■■□□□ 1.77
TRAP1-203ENST00000570403 TMEM199Q8N511 208 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms