RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 MRPL11Q9Y3B7 192 aaKnown RBP10.04□□□□□ -0.8
CTDNEP1-203ENST00000570385 PCDHA11Q9Y5I1 949 aa10.04□□□□□ -0.8
CTDNEP1-203ENST00000570385 TCF20Q9UGU0 1960 aaKnown RBP10.03□□□□□ -0.8
CTDNEP1-203ENST00000570385 EPOPA6NHQ4 379 aa10.03□□□□□ -0.8
CTDNEP1-203ENST00000570385 KLRF2D3W0D1 207 aa10.03□□□□□ -0.8
CTDNEP1-203ENST00000570385 HIP1O00291 1037 aa10.03□□□□□ -0.8
CTDNEP1-203ENST00000570385 PPP1R11O60927 126 aaPredicted RBP10.03□□□□□ -0.8
CTDNEP1-203ENST00000570385 NR3C2P08235 984 aa10.03□□□□□ -0.8
CTDNEP1-203ENST00000570385 PFKMP08237 780 aa10.03□□□□□ -0.8
CTDNEP1-203ENST00000570385 ZNF286BP0CG31 522 aa10.03□□□□□ -0.8
CTDNEP1-203ENST00000570385 ACTN1P12814 892 aa10.03□□□□□ -0.8
CTDNEP1-203ENST00000570385 BFSP2Q13515 415 aa10.03□□□□□ -0.8
CTDNEP1-203ENST00000570385 SKIV2LQ15477 1246 aaKnown RBP10.03□□□□□ -0.8
CTDNEP1-203ENST00000570385 SPRED2Q7Z698 418 aa10.03□□□□□ -0.8
CTDNEP1-203ENST00000570385 PIBF1Q8WXW3 757 aa10.03□□□□□ -0.8
CTDNEP1-203ENST00000570385 ARNTL2Q8WYA1 636 aa10.03□□□□□ -0.8
CTDNEP1-203ENST00000570385 ASB2Q96Q27 587 aa10.03□□□□□ -0.8
CTDNEP1-203ENST00000570385 CTAGE1Q96RT6 745 aa10.03□□□□□ -0.8
CTDNEP1-203ENST00000570385 SENP2Q9HC62 589 aa10.03□□□□□ -0.8
CTDNEP1-203ENST00000570385 PXMP2Q9NR77 195 aa10.03□□□□□ -0.8
CTDNEP1-203ENST00000570385 CTNNA3Q9UI47 895 aa10.03□□□□□ -0.8
CTDNEP1-203ENST00000570385 DDX41Q9UJV9 622 aaKnown RBP10.03□□□□□ -0.8
CTDNEP1-203ENST00000570385 MRVI1Q9Y6F6 885 aa10.03□□□□□ -0.8
CTDNEP1-203ENST00000570385 LAMA4Q16363 1823 aa10.03□□□□□ -0.8
CTDNEP1-203ENST00000570385 PITPNM1O00562 1244 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 OPLAHO14841 1288 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 CASTP20810 708 aaKnown RBP10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 PDE4AP27815 886 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 PSEN2P49810 448 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 MRPS5P82675 430 aaKnown RBP10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 ZNF200P98182 395 aaPredicted RBP10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 TFF2Q03403 129 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 PTPN11Q06124 597 aaPredicted RBP10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 AAMPQ13685 434 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 GPNMBQ14956 572 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 SEC23AQ15436 765 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 DGKDQ16760 1214 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 SLC35G1Q2M3R5 365 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 FCHSD1Q86WN1 690 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 HERC6Q8IVU3 1022 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 C7orf31Q8N865 590 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 IL31RAQ8NI17 732 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 ADAMTS19Q8TE59 1207 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 ATXN2LQ8WWM7 1075 aaKnown RBP10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 DHX38Q92620 1227 aaKnown RBP10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 NECAB3Q96P71 396 aaPredicted RBP10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 IWS1Q96ST2 819 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 AMNQ9BXJ7 453 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 CNNM2Q9H8M5 875 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 HDAC6Q9UBN7 1215 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 MAD2L2Q9UI95 211 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 PCDHA1Q9Y5I3 950 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 TAF6LQ9Y6J9 622 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 BRWD1Q9NSI6 2320 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 CHD9Q3L8U1 2897 aa10.02□□□□□ -0.81
CTDNEP1-203ENST00000570385 MYH7BA7E2Y1 1941 aa10.01□□□□□ -0.81
CTDNEP1-203ENST00000570385 LCHNA4D1U4 455 aa10.01□□□□□ -0.81
CTDNEP1-203ENST00000570385 TNFRSF10AO00220 468 aa10.01□□□□□ -0.81
CTDNEP1-203ENST00000570385 EIF3JO75822 258 aaKnown RBP10.01□□□□□ -0.81
CTDNEP1-203ENST00000570385 RGS20O76081 388 aa10.01□□□□□ -0.81
CTDNEP1-203ENST00000570385 GSPT1P15170 499 aaKnown RBP10.01□□□□□ -0.81
CTDNEP1-203ENST00000570385 RFC2P35250 354 aa10.01□□□□□ -0.81
CTDNEP1-203ENST00000570385 IRX6P78412 446 aaPredicted RBP10.01□□□□□ -0.81
CTDNEP1-203ENST00000570385 PTH1RQ03431 593 aa10.01□□□□□ -0.81
CTDNEP1-203ENST00000570385 TAP1Q03518 808 aa10.01□□□□□ -0.81
CTDNEP1-203ENST00000570385 MFSD10Q14728 455 aa10.01□□□□□ -0.81
CTDNEP1-203ENST00000570385 KIAA0753Q2KHM9 967 aa10.01□□□□□ -0.81
CTDNEP1-203ENST00000570385 TCTN1Q2MV58 587 aa10.01□□□□□ -0.81
CTDNEP1-203ENST00000570385 FAM117BQ6P1L5 589 aa10.01□□□□□ -0.81
CTDNEP1-203ENST00000570385 LRRC8DQ7L1W4 858 aa10.01□□□□□ -0.81
CTDNEP1-203ENST00000570385 DHX37Q8IY37 1157 aaKnown RBP10.01□□□□□ -0.81
CTDNEP1-203ENST00000570385 IL27Q8NEV9 243 aa10.01□□□□□ -0.81
CTDNEP1-203ENST00000570385 GPKOWQ92917 476 aaPredicted RBP eCLIP10.01□□□□□ -0.81
CTDNEP1-203ENST00000570385 WNT8BQ93098 351 aa10.01□□□□□ -0.81
CTDNEP1-203ENST00000570385 PIGSQ96S52 555 aa10.01□□□□□ -0.81
CTDNEP1-203ENST00000570385 SLC9A7Q96T83 725 aa10.01□□□□□ -0.81
CTDNEP1-203ENST00000570385 PDCD2LQ9BRP1 358 aa10.01□□□□□ -0.81
CTDNEP1-203ENST00000570385 KIAA1217Q5T5P2 1943 aa10.01□□□□□ -0.81
CTDNEP1-203ENST00000570385 CHD7Q9P2D1 2997 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 SPTBN5Q9NRC6 3674 aaKnown RBP10□□□□□ -0.81
CTDNEP1-203ENST00000570385 PALM3A6NDB9 673 aaPredicted RBP10□□□□□ -0.81
CTDNEP1-203ENST00000570385 KIF28PB7ZC32 967 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 IFIT3O14879 490 aaKnown RBP10□□□□□ -0.81
CTDNEP1-203ENST00000570385 ZBTB5O15062 677 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 TLL1O43897 1013 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 NBNO60934 754 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 CYP21A2P08686 494 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 CKBP12277 381 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 SELPP16109 830 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 KCNJ6P48051 423 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 HSD17B4P51659 736 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 KCNQ1P51787 676 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 DEFB103AP81534 67 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 SP2Q02086 613 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 TRDNQ13061 729 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 LAMC2Q13753 1193 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 HIC1Q14526 733 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 TTC22Q5TAA0 569 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 SESTD1Q86VW0 696 aa10□□□□□ -0.81
CTDNEP1-203ENST00000570385 CCDC155Q8N6L0 562 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms