RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 A0A1W2PPC1 479 aa10.81□□□□□ -0.68
UBR1-210ENST00000569337 RBM47A0AV96 593 aaKnown RBP10.81□□□□□ -0.68
UBR1-210ENST00000569337 IFNAR1P17181 557 aa10.81□□□□□ -0.68
UBR1-210ENST00000569337 SMARCA1P28370 1054 aa10.81□□□□□ -0.68
UBR1-210ENST00000569337 BMP8BP34820 402 aa10.81□□□□□ -0.68
UBR1-210ENST00000569337 NKX3-2P78367 333 aa10.81□□□□□ -0.68
UBR1-210ENST00000569337 MDM2Q00987 491 aaPredicted RBP10.81□□□□□ -0.68
UBR1-210ENST00000569337 PPP2R5BQ15173 497 aa10.81□□□□□ -0.68
UBR1-210ENST00000569337 STXBP2Q15833 593 aa10.81□□□□□ -0.68
UBR1-210ENST00000569337 FSCN1Q16658 493 aaKnown RBP10.81□□□□□ -0.68
UBR1-210ENST00000569337 DUSP28Q4G0W2 176 aa10.81□□□□□ -0.68
UBR1-210ENST00000569337 TMEM63BQ5T3F8 832 aa10.81□□□□□ -0.68
UBR1-210ENST00000569337 SAMD3Q8N6K7 520 aa10.81□□□□□ -0.68
UBR1-210ENST00000569337 SMARCC2Q8TAQ2 1214 aa10.81□□□□□ -0.68
UBR1-210ENST00000569337 SCFD2Q8WU76 684 aa10.81□□□□□ -0.68
UBR1-210ENST00000569337 AIFM3Q96NN9 605 aa10.81□□□□□ -0.68
UBR1-210ENST00000569337 IWS1Q96ST2 819 aa10.81□□□□□ -0.68
UBR1-210ENST00000569337 SPZ1Q9BXG8 430 aa10.81□□□□□ -0.68
UBR1-210ENST00000569337 UBE2OQ9C0C9 1292 aaKnown RBP10.81□□□□□ -0.68
UBR1-210ENST00000569337 COL20A1Q9P218 1284 aa10.81□□□□□ -0.68
UBR1-210ENST00000569337 SEC63Q9UGP8 760 aaKnown RBP10.81□□□□□ -0.68
UBR1-210ENST00000569337 CCDC196A0A1B0GTZ2 297 aa10.8□□□□□ -0.68
UBR1-210ENST00000569337 DCDC2CA8MYV0 355 aa10.8□□□□□ -0.68
UBR1-210ENST00000569337 GCOM1H8Y6P7 765 aaPredicted RBP10.8□□□□□ -0.68
UBR1-210ENST00000569337 OPLAHO14841 1288 aa10.8□□□□□ -0.68
UBR1-210ENST00000569337 NKRFO15226 690 aaKnown RBP eCLIP10.8□□□□□ -0.68
UBR1-210ENST00000569337 CTAGE5O15320 804 aa10.8□□□□□ -0.68
UBR1-210ENST00000569337 PQBP1O60828 265 aaKnown RBP10.8□□□□□ -0.68
UBR1-210ENST00000569337 CABYRO75952 493 aa10.8□□□□□ -0.68
UBR1-210ENST00000569337 POLR2MP0CAP2 368 aa10.8□□□□□ -0.68
UBR1-210ENST00000569337 TXNP10599 105 aaKnown RBP10.8□□□□□ -0.68
UBR1-210ENST00000569337 EIF2AK2P19525 551 aaKnown RBP10.8□□□□□ -0.68
UBR1-210ENST00000569337 PTGS1P23219 599 aa10.8□□□□□ -0.68
UBR1-210ENST00000569337 HOXA13P31271 388 aaPredicted RBP10.8□□□□□ -0.68
UBR1-210ENST00000569337 ANP32AP39687 249 aaKnown RBP10.8□□□□□ -0.68
UBR1-210ENST00000569337 HSD17B4P51659 736 aa10.8□□□□□ -0.68
UBR1-210ENST00000569337 PKN1Q16512 942 aa10.8□□□□□ -0.68
UBR1-210ENST00000569337 CXCL17Q6UXB2 119 aa10.8□□□□□ -0.68
UBR1-210ENST00000569337 SPRYD3Q8NCJ5 442 aa10.8□□□□□ -0.68
UBR1-210ENST00000569337 SLC26A6Q9BXS9 759 aa10.8□□□□□ -0.68
UBR1-210ENST00000569337 PXMP2Q9NR77 195 aa10.8□□□□□ -0.68
UBR1-210ENST00000569337 V9GY48 417 aaPredicted RBP10.8□□□□□ -0.68
UBR1-210ENST00000569337 PLXNA1Q9UIW2 1896 aa10.8□□□□□ -0.68
UBR1-210ENST00000569337 A0A0U1RQG5 324 aaPredicted RBP10.79□□□□□ -0.68
UBR1-210ENST00000569337 ARVCFO00192 962 aa10.79□□□□□ -0.68
UBR1-210ENST00000569337 CPLX1O14810 134 aa10.79□□□□□ -0.68
UBR1-210ENST00000569337 PRPF3O43395 683 aaKnown RBP10.79□□□□□ -0.68
UBR1-210ENST00000569337 NR3C2P08235 984 aa10.79□□□□□ -0.68
UBR1-210ENST00000569337 CLTBP09497 229 aa10.79□□□□□ -0.68
UBR1-210ENST00000569337 CPT1AP50416 773 aa10.79□□□□□ -0.68
UBR1-210ENST00000569337 FXR1P51114 621 aaKnown RBP eCLIP10.79□□□□□ -0.68
UBR1-210ENST00000569337 GHRHRQ02643 423 aa10.79□□□□□ -0.68
UBR1-210ENST00000569337 TTLL4Q14679 1199 aa10.79□□□□□ -0.68
UBR1-210ENST00000569337 BRDTQ58F21 947 aaPredicted RBP10.79□□□□□ -0.68
UBR1-210ENST00000569337 SEPT14Q6ZU15 432 aa10.79□□□□□ -0.68
UBR1-210ENST00000569337 ANKRD33Q7Z3H0 272 aa10.79□□□□□ -0.68
UBR1-210ENST00000569337 FCHSD1Q86WN1 690 aa10.79□□□□□ -0.68
UBR1-210ENST00000569337 OR6J1Q8NGC5 347 aa10.79□□□□□ -0.68
UBR1-210ENST00000569337 TOX2Q96NM4 488 aa10.79□□□□□ -0.68
UBR1-210ENST00000569337 LLPHQ9BRT6 129 aaKnown RBP10.79□□□□□ -0.68
UBR1-210ENST00000569337 PDLIM7Q9NR12 457 aa10.79□□□□□ -0.68
UBR1-210ENST00000569337 TMEM39AQ9NV64 488 aa10.79□□□□□ -0.68
UBR1-210ENST00000569337 PCDH10Q9P2E7 1040 aa10.79□□□□□ -0.68
UBR1-210ENST00000569337 MROH7Q68CQ1 1323 aa10.79□□□□□ -0.68
UBR1-210ENST00000569337 TRIM43BA6NCK2 446 aa10.78□□□□□ -0.68
UBR1-210ENST00000569337 EIF3JO75822 258 aaKnown RBP10.78□□□□□ -0.68
UBR1-210ENST00000569337 MYCLP12524 364 aaPredicted RBP10.78□□□□□ -0.68
UBR1-210ENST00000569337 CDK7P50613 346 aa10.78□□□□□ -0.68
UBR1-210ENST00000569337 SSRP1Q08945 709 aaKnown RBP10.78□□□□□ -0.68
UBR1-210ENST00000569337 BECN1Q14457 450 aa10.78□□□□□ -0.68
UBR1-210ENST00000569337 SH3RF1Q7Z6J0 888 aa10.78□□□□□ -0.68
UBR1-210ENST00000569337 TDHQ8IZJ6 230 aa10.78□□□□□ -0.68
UBR1-210ENST00000569337 CUL5Q93034 780 aa10.78□□□□□ -0.68
UBR1-210ENST00000569337 TRIM43Q96BQ3 446 aaPredicted RBP10.78□□□□□ -0.68
UBR1-210ENST00000569337 INTS4Q96HW7 963 aaKnown RBP10.78□□□□□ -0.68
UBR1-210ENST00000569337 PDCD2LQ9BRP1 358 aa10.78□□□□□ -0.68
UBR1-210ENST00000569337 RNF26Q9BY78 433 aaPredicted RBP10.78□□□□□ -0.68
UBR1-210ENST00000569337 GJB4Q9NTQ9 266 aa10.78□□□□□ -0.68
UBR1-210ENST00000569337 POLR3EQ9NVU0 708 aa10.78□□□□□ -0.68
UBR1-210ENST00000569337 ORC3Q9UBD5 711 aaPredicted RBP10.78□□□□□ -0.68
UBR1-210ENST00000569337 STK36Q9NRP7 1315 aa10.78□□□□□ -0.68
UBR1-210ENST00000569337 TLR3O15455 904 aaKnown RBP10.77□□□□□ -0.69
UBR1-210ENST00000569337 CDKL5O76039 1030 aa10.77□□□□□ -0.69
UBR1-210ENST00000569337 SLC34A2O95436 690 aa10.77□□□□□ -0.69
UBR1-210ENST00000569337 MYL3P08590 195 aa10.77□□□□□ -0.69
UBR1-210ENST00000569337 RAG1P15918 1043 aa10.77□□□□□ -0.69
UBR1-210ENST00000569337 GJB2P29033 226 aa10.77□□□□□ -0.69
UBR1-210ENST00000569337 FAAP100Q0VG06 881 aa10.77□□□□□ -0.69
UBR1-210ENST00000569337 ITGA7Q13683 1181 aa10.77□□□□□ -0.69
UBR1-210ENST00000569337 PGM5Q15124 567 aa10.77□□□□□ -0.69
UBR1-210ENST00000569337 PFKFB3Q16875 520 aaPredicted RBP10.77□□□□□ -0.69
UBR1-210ENST00000569337 LY6KQ17RY6 165 aa10.77□□□□□ -0.69
UBR1-210ENST00000569337 WWC2Q6AWC2 1192 aa10.77□□□□□ -0.69
UBR1-210ENST00000569337 TYW1BQ6NUM6 668 aa10.77□□□□□ -0.69
UBR1-210ENST00000569337 CCDC62Q6P9F0 684 aa10.77□□□□□ -0.69
UBR1-210ENST00000569337 COPS5Q92905 334 aa10.77□□□□□ -0.69
UBR1-210ENST00000569337 GPKOWQ92917 476 aaPredicted RBP eCLIP10.77□□□□□ -0.69
UBR1-210ENST00000569337 BADQ92934 168 aa10.77□□□□□ -0.69
UBR1-210ENST00000569337 SEZ6LQ9BYH1 1024 aa10.77□□□□□ -0.69
UBR1-210ENST00000569337 DNAH12Q6ZR08 3092 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms