RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 GRAMD1BQ3KR37 738 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 SPDYCQ5MJ68 293 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 PDZD4Q76G19 769 aaPredicted RBP7.7□□□□□ -1.18
CNOT1-216ENST00000569240 TUBGCP2Q9BSJ2 902 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 WWP1Q9H0M0 922 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 CNGB3Q9NQW8 809 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 GOLGA8MH3BSY2 632 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 TTKP33981 857 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 WASHC2DQ5SRD0 308 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 PCNX4Q63HM2 1172 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 C11orf57Q6ZUT1 292 aaPredicted RBP7.7□□□□□ -1.18
CNOT1-216ENST00000569240 CRLF3Q8IUI8 442 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 MAGOHBQ96A72 148 aaKnown RBP7.7□□□□□ -1.18
CNOT1-216ENST00000569240 KCNK16Q96T55 309 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 AATFQ9NY61 560 aaKnown RBP eCLIP7.7□□□□□ -1.181e-323■□□□□ 8.6
CNOT1-216ENST00000569240 ARMCX3Q9UH62 379 aaPredicted RBP7.7□□□□□ -1.18
CNOT1-216ENST00000569240 LRCH1Q9Y2L9 728 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 ZNF711Q9Y462 761 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 TRPC1P48995 793 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 RBL2Q08999 1139 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 STAT4Q14765 748 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 TRPM8Q7Z2W7 1104 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 TRPC4APQ8TEL6 797 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 ZFRQ96KR1 1074 aaKnown RBP7.69□□□□□ -1.18
CNOT1-216ENST00000569240 GPR108Q9NPR9 543 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 TMCO1Q9UM00 188 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 HPCAL4Q9UM19 191 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 PFASO15067 1338 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 PALM3A6NDB9 673 aaPredicted RBP7.69□□□□□ -1.18
CNOT1-216ENST00000569240 ZNF839A8K0R7 811 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 CHL1O00533 1208 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 HLA-DOAP06340 250 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 CCNE1P24864 410 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 VPS41P49754 854 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 DR1Q01658 176 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 UAP1Q16222 522 aaPredicted RBP7.69□□□□□ -1.18
CNOT1-216ENST00000569240 PTGISQ16647 500 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 ARL6IP4Q66PJ3 421 aaKnown RBP7.69□□□□□ -1.18
CNOT1-216ENST00000569240 CLASP2O75122 1294 aaKnown RBP7.69□□□□□ -1.18
CNOT1-216ENST00000569240 KRT37O76014 449 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 KRT16P08779 473 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 RFX1P22670 979 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 MSH2P43246 934 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 RESTQ13127 1097 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 PNOCQ13519 176 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 TMEM154Q6P9G4 183 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 MGARPQ8TDB4 240 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 CIDEBQ9UHD4 219 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 RIMS2Q9UQ26 1411 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 B4DLN1 442 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 MT-ND3P03897 115 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 NSMCE1Q8WV22 266 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 CEP19Q96LK0 163 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 FTOQ9C0B1 505 aaKnown RBP eCLIP7.69□□□□□ -1.18
CNOT1-216ENST00000569240 CORO1CQ9ULV4 474 aaPredicted RBP7.69□□□□□ -1.18
CNOT1-216ENST00000569240 PRG4Q92954 1404 aaPredicted RBP7.69□□□□□ -1.18
CNOT1-216ENST00000569240 PSMD14O00487 310 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 GPC4O75487 556 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 PECAM1P16284 738 aaPredicted RBP7.69□□□□□ -1.18
CNOT1-216ENST00000569240 SERPINB3P29508 390 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 NDUFA8P51970 172 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 RCN2Q14257 317 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 ANKRD13DQ6ZTN6 518 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 PROM2Q8N271 834 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 C8orf58Q8NAV2 365 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 LSG1Q9H089 658 aaKnown RBP7.69□□□□□ -1.18
CNOT1-216ENST00000569240 FHOD1Q9Y613 1164 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 MAD1L1Q9Y6D9 718 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 PITPNM2Q9BZ72 1349 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 TMEM110-MUSTN1A8MSY1 372 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 H0Y626 953 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 TRIM16O95361 564 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 RPN1P04843 607 aaKnown RBP7.69□□□□□ -1.18
CNOT1-216ENST00000569240 BASP1P80723 227 aaKnown RBP7.69□□□□□ -1.18
CNOT1-216ENST00000569240 RASGRF1Q13972 1273 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 RPS6KA2Q15349 733 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 BTNL9Q6UXG8 535 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 ZNF710Q8N1W2 664 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 FAM81AQ8TBF8 368 aa7.69□□□□□ -1.18
CNOT1-216ENST00000569240 SERPINB1P30740 379 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 POLR2BP30876 1174 aaKnown RBP7.68□□□□□ -1.18
CNOT1-216ENST00000569240 GRIN1Q05586 938 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 FUT8Q9BYC5 575 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 CHMP2AO43633 222 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 CBFA2T3O75081 653 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 DPCR1Q3MIW9 517 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 BEND3Q5T5X7 828 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 CYFIP2Q96F07 1278 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 XPO6Q96QU8 1125 aaKnown RBP7.68□□□□□ -1.18
CNOT1-216ENST00000569240 APOBEC2Q9Y235 224 aaKnown RBP7.68□□□□□ -1.18
CNOT1-216ENST00000569240 ATP8A1Q9Y2Q0 1164 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 CD2APQ9Y5K6 639 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 GOLGA8CPA6NN73 597 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 AARSP49588 968 aaKnown RBP eCLIP7.68□□□□□ -1.184e-11■■□□□ 13.1
CNOT1-216ENST00000569240 SLC12A2P55011 1212 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 RASGRP2Q7LDG7 609 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 JADE3Q92613 823 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 SEC16BQ96JE7 1060 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 TTC1Q99614 292 aa7.68□□□□□ -1.18
CNOT1-216ENST00000569240 LRWD1Q9UFC0 647 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms