RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 RFX1P22670 979 aa10.74□□□□□ -0.69
CAPN3-219ENST00000569136 ADORA2AP29274 412 aa10.74□□□□□ -0.69
CAPN3-219ENST00000569136 SCTRP47872 440 aa10.74□□□□□ -0.69
CAPN3-219ENST00000569136 GJA8P48165 433 aa10.74□□□□□ -0.69
CAPN3-219ENST00000569136 USP4Q13107 963 aa10.74□□□□□ -0.69
CAPN3-219ENST00000569136 MTFR1Q15390 333 aa10.74□□□□□ -0.69
CAPN3-219ENST00000569136 CCDC96Q2M329 555 aa10.74□□□□□ -0.69
CAPN3-219ENST00000569136 EML3Q32P44 896 aa10.74□□□□□ -0.69
CAPN3-219ENST00000569136 KCTD1Q719H9 257 aa10.74□□□□□ -0.69
CAPN3-219ENST00000569136 CPXCR1Q8N123 301 aa10.74□□□□□ -0.69
CAPN3-219ENST00000569136 MMP19Q99542 508 aa10.74□□□□□ -0.69
CAPN3-219ENST00000569136 LSG1Q9H089 658 aaKnown RBP10.74□□□□□ -0.69
CAPN3-219ENST00000569136 RBM8AQ9Y5S9 174 aaKnown RBP10.74□□□□□ -0.69
CAPN3-219ENST00000569136 E7EWF7 191 aa10.73□□□□□ -0.69
CAPN3-219ENST00000569136 UPP2O95045 317 aa10.73□□□□□ -0.69
CAPN3-219ENST00000569136 TFRCP02786 760 aaKnown RBP10.73□□□□□ -0.69
CAPN3-219ENST00000569136 SNHG28P0DPA3 235 aa10.73□□□□□ -0.69
CAPN3-219ENST00000569136 PDHBP11177 359 aa10.73□□□□□ -0.69
CAPN3-219ENST00000569136 EN2P19622 333 aaPredicted RBP10.73□□□□□ -0.69
CAPN3-219ENST00000569136 NCOA4Q13772 614 aa10.73□□□□□ -0.69
CAPN3-219ENST00000569136 NECTIN1Q15223 517 aa10.73□□□□□ -0.69
CAPN3-219ENST00000569136 IFIT1BQ5T764 474 aaKnown RBP10.73□□□□□ -0.69
CAPN3-219ENST00000569136 MAP3K21Q5TCX8 1036 aa10.73□□□□□ -0.69
CAPN3-219ENST00000569136 SNRNP48Q6IEG0 339 aaKnown RBP10.73□□□□□ -0.69
CAPN3-219ENST00000569136 CCDC82Q8N4S0 544 aa10.73□□□□□ -0.69
CAPN3-219ENST00000569136 MSL3Q8N5Y2 521 aaKnown RBP10.73□□□□□ -0.69
CAPN3-219ENST00000569136 ENAHQ8N8S7 591 aaPredicted RBP10.73□□□□□ -0.69
CAPN3-219ENST00000569136 DDX11Q96FC9 970 aa10.73□□□□□ -0.69
CAPN3-219ENST00000569136 ZKSCAN3Q9BRR0 538 aa10.73□□□□□ -0.69
CAPN3-219ENST00000569136 MAF1Q9H063 256 aa10.73□□□□□ -0.69
CAPN3-219ENST00000569136 RAVER2Q9HCJ3 691 aaKnown RBP10.73□□□□□ -0.69
CAPN3-219ENST00000569136 ANO2Q9NQ90 1003 aa10.73□□□□□ -0.69
CAPN3-219ENST00000569136 PAK6Q9NQU5 681 aaPredicted RBP10.73□□□□□ -0.69
CAPN3-219ENST00000569136 AAASQ9NRG9 546 aa10.73□□□□□ -0.69
CAPN3-219ENST00000569136 NRBP1Q9UHY1 535 aa10.73□□□□□ -0.69
CAPN3-219ENST00000569136 PRR12Q9ULL5 1215 aa10.73□□□□□ -0.69
CAPN3-219ENST00000569136 NEDD4P46934 1319 aa10.73□□□□□ -0.69
CAPN3-219ENST00000569136 LAMB1P07942 1786 aa10.72□□□□□ -0.69
CAPN3-219ENST00000569136 IFIT3O14879 490 aaKnown RBP10.72□□□□□ -0.69
CAPN3-219ENST00000569136 EPB41L2O43491 1005 aaKnown RBP10.72□□□□□ -0.69
CAPN3-219ENST00000569136 MSCO60682 206 aa10.72□□□□□ -0.69
CAPN3-219ENST00000569136 EIF5BO60841 1220 aaKnown RBP10.72□□□□□ -0.69
CAPN3-219ENST00000569136 COBLO75128 1261 aa10.72□□□□□ -0.69
CAPN3-219ENST00000569136 PARP1P09874 1014 aaKnown RBP10.72□□□□□ -0.69
CAPN3-219ENST00000569136 BMP1P13497 986 aa10.72□□□□□ -0.69
CAPN3-219ENST00000569136 ADD1P35611 737 aaKnown RBP10.72□□□□□ -0.69
CAPN3-219ENST00000569136 CACNB2Q08289 660 aaPredicted RBP10.72□□□□□ -0.69
CAPN3-219ENST00000569136 ZNF543Q08ER8 600 aa10.72□□□□□ -0.69
CAPN3-219ENST00000569136 ASPRV1Q53RT3 343 aa10.72□□□□□ -0.69
CAPN3-219ENST00000569136 SYDE2Q5VT97 1194 aa10.72□□□□□ -0.69
CAPN3-219ENST00000569136 TRAF7Q6Q0C0 670 aa10.72□□□□□ -0.69
CAPN3-219ENST00000569136 U2AF1L4Q8WU68 220 aaKnown RBP10.72□□□□□ -0.69
CAPN3-219ENST00000569136 TRIB2Q92519 343 aa10.72□□□□□ -0.69
CAPN3-219ENST00000569136 AGBL1Q96MI9 1066 aa10.72□□□□□ -0.69
CAPN3-219ENST00000569136 MTMR7Q9Y216 660 aa10.72□□□□□ -0.69
CAPN3-219ENST00000569136 PHIPQ8WWQ0 1821 aa10.72□□□□□ -0.69
CAPN3-219ENST00000569136 CDK5RAP2Q96SN8 1893 aa10.72□□□□□ -0.69
CAPN3-219ENST00000569136 SLC27A2O14975 620 aa10.71□□□□□ -0.69
CAPN3-219ENST00000569136 LILRA1O75019 489 aa10.71□□□□□ -0.69
CAPN3-219ENST00000569136 REC8O95072 547 aa10.71□□□□□ -0.69
CAPN3-219ENST00000569136 TNKSO95271 1327 aa10.71□□□□□ -0.69
CAPN3-219ENST00000569136 IGHA2P01877 340 aa10.71□□□□□ -0.69
CAPN3-219ENST00000569136 ICAM1P05362 532 aa10.71□□□□□ -0.69
CAPN3-219ENST00000569136 MCM5P33992 734 aa10.71□□□□□ -0.69
CAPN3-219ENST00000569136 RELBQ01201 579 aa10.71□□□□□ -0.69
CAPN3-219ENST00000569136 TRAF1Q13077 416 aa10.71□□□□□ -0.69
CAPN3-219ENST00000569136 KRT32Q14532 448 aa10.71□□□□□ -0.69
CAPN3-219ENST00000569136 SEC23AQ15436 765 aa10.71□□□□□ -0.69
CAPN3-219ENST00000569136 ZNF792Q3KQV3 632 aa10.71□□□□□ -0.69
CAPN3-219ENST00000569136 DDX60LQ5H9U9 1706 aaKnown RBP10.71□□□□□ -0.69
CAPN3-219ENST00000569136 C6orf118Q5T5N4 469 aa10.71□□□□□ -0.69
CAPN3-219ENST00000569136 CREB3L3Q68CJ9 461 aa10.71□□□□□ -0.69
CAPN3-219ENST00000569136 TTBK2Q6IQ55 1244 aa10.71□□□□□ -0.69
CAPN3-219ENST00000569136 ANKRD35Q8N283 1001 aa10.71□□□□□ -0.69
CAPN3-219ENST00000569136 NPLOC4Q8TAT6 608 aa10.71□□□□□ -0.69
CAPN3-219ENST00000569136 DEFB118Q96PH6 123 aa10.71□□□□□ -0.69
CAPN3-219ENST00000569136 TRERF1Q96PN7 1200 aa10.71□□□□□ -0.69
CAPN3-219ENST00000569136 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.71□□□□□ -0.69
CAPN3-219ENST00000569136 RANBP17Q9H2T7 1088 aaKnown RBP10.71□□□□□ -0.69
CAPN3-219ENST00000569136 RIPK3Q9Y572 518 aa10.71□□□□□ -0.69
CAPN3-219ENST00000569136 MYH7P12883 1935 aa10.7□□□□□ -0.7
CAPN3-219ENST00000569136 BAZ2AQ9UIF9 1905 aaKnown RBP10.7□□□□□ -0.7
CAPN3-219ENST00000569136 NAV1Q8NEY1 1877 aa10.7□□□□□ -0.7
CAPN3-219ENST00000569136 HMGB1P09429 215 aaKnown RBP10.7□□□□□ -0.7
CAPN3-219ENST00000569136 SLC16A2P36021 539 aa10.7□□□□□ -0.7
CAPN3-219ENST00000569136 SMCPP49901 116 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-219ENST00000569136 WTAPQ15007 396 aa10.7□□□□□ -0.7
CAPN3-219ENST00000569136 CCL14Q16627 93 aa10.7□□□□□ -0.7
CAPN3-219ENST00000569136 TMEM67Q5HYA8 995 aa10.7□□□□□ -0.7
CAPN3-219ENST00000569136 CYB5R4Q7L1T6 521 aa10.7□□□□□ -0.7
CAPN3-219ENST00000569136 CATIPQ7Z7H3 387 aa10.7□□□□□ -0.7
CAPN3-219ENST00000569136 SKAP1Q86WV1 359 aa10.7□□□□□ -0.7
CAPN3-219ENST00000569136 RGS22Q8NE09 1264 aa10.7□□□□□ -0.7
CAPN3-219ENST00000569136 IGDCC4Q8TDY8 1250 aa10.7□□□□□ -0.7
CAPN3-219ENST00000569136 MAML3Q96JK9 1138 aa10.7□□□□□ -0.7
CAPN3-219ENST00000569136 TMEM87BQ96K49 555 aa10.7□□□□□ -0.7
CAPN3-219ENST00000569136 MAP3K14Q99558 947 aa10.7□□□□□ -0.7
CAPN3-219ENST00000569136 TINF2Q9BSI4 451 aa10.7□□□□□ -0.7
CAPN3-219ENST00000569136 ACAD9Q9H845 621 aa10.7□□□□□ -0.7
CAPN3-219ENST00000569136 NOD1Q9Y239 953 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms