RNA–Protein interactions for RNA: ENST00000568881.1

NEIL1-220, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-220ENST00000568881 STK3Q13188 491 aa15.83■□□□□ 0.12
NEIL1-220ENST00000568881 TMEM63BQ5T3F8 832 aa15.83■□□□□ 0.12
NEIL1-220ENST00000568881 CCSAPQ6IQ19 270 aaPredicted RBP15.83■□□□□ 0.12
NEIL1-220ENST00000568881 KCNV1Q6PIU1 500 aa15.83■□□□□ 0.12
NEIL1-220ENST00000568881 CPLX2Q6PUV4 134 aaKnown RBP15.83■□□□□ 0.12
NEIL1-220ENST00000568881 CMTR1Q8N1G2 835 aaKnown RBP15.83■□□□□ 0.12
NEIL1-220ENST00000568881 CCDC82Q8N4S0 544 aa15.83■□□□□ 0.12
NEIL1-220ENST00000568881 TBC1D5Q92609 795 aa15.83■□□□□ 0.12
NEIL1-220ENST00000568881 TOX2Q96NM4 488 aa15.83■□□□□ 0.12
NEIL1-220ENST00000568881 PRO3102Q9H379 93 aa15.83■□□□□ 0.12
NEIL1-220ENST00000568881 FAM217BQ9NTX9 383 aaPredicted RBP15.83■□□□□ 0.12
NEIL1-220ENST00000568881 LAMA3Q16787 3333 aa15.83■□□□□ 0.12
NEIL1-220ENST00000568881 KPNA6O60684 536 aa15.82■□□□□ 0.12
NEIL1-220ENST00000568881 PFKFB2O60825 505 aa15.82■□□□□ 0.12
NEIL1-220ENST00000568881 PQBP1O60828 265 aaKnown RBP15.82■□□□□ 0.12
NEIL1-220ENST00000568881 NR3C2P08235 984 aa15.82■□□□□ 0.12
NEIL1-220ENST00000568881 CLTBP09497 229 aa15.82■□□□□ 0.12
NEIL1-220ENST00000568881 CCND2P30279 289 aa15.82■□□□□ 0.12
NEIL1-220ENST00000568881 MAGEA10P43363 369 aaPredicted RBP15.82■□□□□ 0.12
NEIL1-220ENST00000568881 MCM2P49736 904 aa15.82■□□□□ 0.12
NEIL1-220ENST00000568881 TLE2Q04725 743 aa15.82■□□□□ 0.12
NEIL1-220ENST00000568881 SLC35G1Q2M3R5 365 aa15.82■□□□□ 0.12
NEIL1-220ENST00000568881 SMARCC2Q8TAQ2 1214 aa15.82■□□□□ 0.12
NEIL1-220ENST00000568881 ZSCAN31Q96LW9 406 aaPredicted RBP15.82■□□□□ 0.12
NEIL1-220ENST00000568881 UBE2OQ9C0C9 1292 aaKnown RBP15.82■□□□□ 0.12
NEIL1-220ENST00000568881 SZT2Q5T011 3432 aa15.82■□□□□ 0.12
NEIL1-220ENST00000568881 hCG_1984214I3L0E3 225 aa15.81■□□□□ 0.12
NEIL1-220ENST00000568881 STAM2O75886 525 aa15.81■□□□□ 0.12
NEIL1-220ENST00000568881 FXR1P51114 621 aaKnown RBP eCLIP15.81■□□□□ 0.12
NEIL1-220ENST00000568881 BEX3Q00994 111 aa15.81■□□□□ 0.12
NEIL1-220ENST00000568881 ME3Q16798 604 aa15.81■□□□□ 0.12
NEIL1-220ENST00000568881 SEPT14Q6ZU15 432 aa15.81■□□□□ 0.12
NEIL1-220ENST00000568881 ANKRD33Q7Z3H0 272 aa15.81■□□□□ 0.12
NEIL1-220ENST00000568881 FCHSD1Q86WN1 690 aa15.81■□□□□ 0.12
NEIL1-220ENST00000568881 TEX2Q8IWB9 1127 aa15.81■□□□□ 0.12
NEIL1-220ENST00000568881 ZNF713Q8N859 430 aaPredicted RBP15.81■□□□□ 0.12
NEIL1-220ENST00000568881 GDF15Q99988 308 aa15.81■□□□□ 0.12
NEIL1-220ENST00000568881 PDCD2LQ9BRP1 358 aa15.81■□□□□ 0.12
NEIL1-220ENST00000568881 EHMT1Q9H9B1 1298 aa15.81■□□□□ 0.12
NEIL1-220ENST00000568881 NCOA5Q9HCD5 579 aaKnown RBP15.81■□□□□ 0.12
NEIL1-220ENST00000568881 COL20A1Q9P218 1284 aa15.81■□□□□ 0.12
NEIL1-220ENST00000568881 MRVI1Q9Y6F6 885 aa15.81■□□□□ 0.12
NEIL1-220ENST00000568881 CNTNAP5Q8WYK1 1306 aa15.8■□□□□ 0.12
NEIL1-220ENST00000568881 ARVCFO00192 962 aa15.8■□□□□ 0.12
NEIL1-220ENST00000568881 OPLAHO14841 1288 aa15.8■□□□□ 0.12
NEIL1-220ENST00000568881 CDKL5O76039 1030 aa15.8■□□□□ 0.12
NEIL1-220ENST00000568881 GH1P01241 217 aa15.8■□□□□ 0.12
NEIL1-220ENST00000568881 MYCLP12524 364 aaPredicted RBP15.8■□□□□ 0.12
NEIL1-220ENST00000568881 IFNAR1P17181 557 aa15.8■□□□□ 0.12
NEIL1-220ENST00000568881 HOXA13P31271 388 aaPredicted RBP15.8■□□□□ 0.12
NEIL1-220ENST00000568881 AKAP17AQ02040 695 aaKnown RBP15.8■□□□□ 0.12
NEIL1-220ENST00000568881 GNPTABQ3T906 1256 aa15.8■□□□□ 0.12
NEIL1-220ENST00000568881 CXCL17Q6UXB2 119 aa15.8■□□□□ 0.12
NEIL1-220ENST00000568881 PDLIM7Q9NR12 457 aa15.8■□□□□ 0.12
NEIL1-220ENST00000568881 SH2B1Q9NRF2 756 aaPredicted RBP15.8■□□□□ 0.12
NEIL1-220ENST00000568881 TMEM39AQ9NV64 488 aa15.8■□□□□ 0.12
NEIL1-220ENST00000568881 V9GY48 417 aaPredicted RBP15.8■□□□□ 0.12
NEIL1-220ENST00000568881 DLL1O00548 723 aa15.79■□□□□ 0.12
NEIL1-220ENST00000568881 TGFB3P10600 412 aa15.79■□□□□ 0.12
NEIL1-220ENST00000568881 RAG1P15918 1043 aa15.79■□□□□ 0.12
NEIL1-220ENST00000568881 MDM2Q00987 491 aaPredicted RBP15.79■□□□□ 0.12
NEIL1-220ENST00000568881 FUT2Q10981 343 aa15.79■□□□□ 0.12
NEIL1-220ENST00000568881 SCRN1Q12765 414 aa15.79■□□□□ 0.12
NEIL1-220ENST00000568881 PGM5Q15124 567 aa15.79■□□□□ 0.12
NEIL1-220ENST00000568881 XRRA1Q6P2D8 792 aa15.79■□□□□ 0.12
NEIL1-220ENST00000568881 HEATR3Q7Z4Q2 680 aa15.79■□□□□ 0.12
NEIL1-220ENST00000568881 TRIM22Q8IYM9 498 aa15.79■□□□□ 0.12
NEIL1-220ENST00000568881 GLT8D2Q9H1C3 349 aa15.79■□□□□ 0.12
NEIL1-220ENST00000568881 PSTPIP2Q9H939 334 aa15.79■□□□□ 0.12
NEIL1-220ENST00000568881 PIK3CDO00329 1044 aa15.78■□□□□ 0.12
NEIL1-220ENST00000568881 CTAGE5O15320 804 aa15.78■□□□□ 0.12
NEIL1-220ENST00000568881 LARGE1O95461 756 aa15.78■□□□□ 0.12
NEIL1-220ENST00000568881 MYL3P08590 195 aa15.78■□□□□ 0.12
NEIL1-220ENST00000568881 SSRP1Q08945 709 aaKnown RBP15.78■□□□□ 0.12
NEIL1-220ENST00000568881 ITGA7Q13683 1181 aa15.78■□□□□ 0.12
NEIL1-220ENST00000568881 NTRK3Q16288 839 aa15.78■□□□□ 0.12
NEIL1-220ENST00000568881 PPP1R18Q6NYC8 613 aa15.78■□□□□ 0.12
NEIL1-220ENST00000568881 VSIG10LQ86VR7 867 aa15.78■□□□□ 0.12
NEIL1-220ENST00000568881 TDHQ8IZJ6 230 aa15.78■□□□□ 0.12
NEIL1-220ENST00000568881 NECAB1Q8N987 351 aa15.78■□□□□ 0.12
NEIL1-220ENST00000568881 GTF3C6Q969F1 213 aa15.78■□□□□ 0.12
NEIL1-220ENST00000568881 MTG1Q9BT17 334 aaPredicted RBP15.78■□□□□ 0.12
NEIL1-220ENST00000568881 RNF26Q9BY78 433 aaPredicted RBP15.78■□□□□ 0.12
NEIL1-220ENST00000568881 hCG_1642624A0A1W2PR95 340 aa15.77■□□□□ 0.12
NEIL1-220ENST00000568881 A6NJR5 290 aa15.77■□□□□ 0.12
NEIL1-220ENST00000568881 SPDYE3A6NKU9 549 aa15.77■□□□□ 0.12
NEIL1-220ENST00000568881 SOX1O00570 391 aaPredicted RBP15.77■□□□□ 0.12
NEIL1-220ENST00000568881 KIAA0355O15063 1070 aa15.77■□□□□ 0.12
NEIL1-220ENST00000568881 PRPF3O43395 683 aaKnown RBP15.77■□□□□ 0.12
NEIL1-220ENST00000568881 SUPT20HL2P0C7V6 817 aa15.77■□□□□ 0.12
NEIL1-220ENST00000568881 CDK7P50613 346 aa15.77■□□□□ 0.12
NEIL1-220ENST00000568881 NAPAP54920 295 aa15.77■□□□□ 0.12
NEIL1-220ENST00000568881 LAMC2Q13753 1193 aa15.77■□□□□ 0.12
NEIL1-220ENST00000568881 CCDC62Q6P9F0 684 aa15.77■□□□□ 0.12
NEIL1-220ENST00000568881 DHX37Q8IY37 1157 aaKnown RBP15.77■□□□□ 0.12
NEIL1-220ENST00000568881 CCDC12Q8WUD4 166 aaPredicted RBP15.77■□□□□ 0.12
NEIL1-220ENST00000568881 PHKBQ93100 1093 aa15.77■□□□□ 0.12
NEIL1-220ENST00000568881 SLC26A6Q9BXS9 759 aa15.77■□□□□ 0.12
NEIL1-220ENST00000568881 RBAK-RBAKDNI3L0D1 243 aa15.76■□□□□ 0.11
NEIL1-220ENST00000568881 PURAQ00577 322 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms