RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 TMEM87BQ96K49 555 aa13.22□□□□□ -0.29
SNAPC5-208ENST00000568875 MAF1Q9H063 256 aa13.22□□□□□ -0.29
SNAPC5-208ENST00000568875 RIOX1Q9H6W3 641 aa13.22□□□□□ -0.29
SNAPC5-208ENST00000568875 LAMA3Q16787 3333 aa13.22□□□□□ -0.29
SNAPC5-208ENST00000568875 LOC102724159A0A0B4J2E5 919 aa13.22□□□□□ -0.29
SNAPC5-208ENST00000568875 ADCY6O43306 1168 aa13.22□□□□□ -0.29
SNAPC5-208ENST00000568875 CYTH3O43739 400 aa13.22□□□□□ -0.29
SNAPC5-208ENST00000568875 ADAMTS4O75173 837 aa13.22□□□□□ -0.29
SNAPC5-208ENST00000568875 NOLC1Q14978 699 aaKnown RBP eCLIP13.22□□□□□ -0.29
SNAPC5-208ENST00000568875 PWP2Q15269 919 aaKnown RBP13.22□□□□□ -0.29
SNAPC5-208ENST00000568875 CATIPQ7Z7H3 387 aa13.22□□□□□ -0.29
SNAPC5-208ENST00000568875 FBXO11Q86XK2 927 aa13.22□□□□□ -0.29
SNAPC5-208ENST00000568875 BICD2Q8TD16 824 aa13.22□□□□□ -0.29
SNAPC5-208ENST00000568875 LENG1Q96BZ8 264 aaPredicted RBP13.22□□□□□ -0.29
SNAPC5-208ENST00000568875 MAP3K14Q99558 947 aa13.22□□□□□ -0.29
SNAPC5-208ENST00000568875 ADD3Q9UEY8 706 aaKnown RBP13.22□□□□□ -0.29
SNAPC5-208ENST00000568875 TRIOBPQ9H2D6 2365 aa13.21□□□□□ -0.29
SNAPC5-208ENST00000568875 LCTP09848 1927 aa13.21□□□□□ -0.29
SNAPC5-208ENST00000568875 KBTBD13C9JR72 458 aa13.21□□□□□ -0.3
SNAPC5-208ENST00000568875 SH2B2O14492 632 aaPredicted RBP13.21□□□□□ -0.3
SNAPC5-208ENST00000568875 CALML3P27482 149 aa13.21□□□□□ -0.3
SNAPC5-208ENST00000568875 LIFRP42702 1097 aa13.21□□□□□ -0.3
SNAPC5-208ENST00000568875 ALDH5A1P51649 535 aaPredicted RBP13.21□□□□□ -0.3
SNAPC5-208ENST00000568875 APOBRQ0VD83 1088 aa13.21□□□□□ -0.3
SNAPC5-208ENST00000568875 TAPT1Q6NXT6 567 aa13.21□□□□□ -0.3
SNAPC5-208ENST00000568875 SLC30A10Q6XR72 485 aa13.21□□□□□ -0.3
SNAPC5-208ENST00000568875 MTERF4Q7Z6M4 381 aaKnown RBP13.21□□□□□ -0.3
SNAPC5-208ENST00000568875 RNF180Q86T96 592 aa13.21□□□□□ -0.3
SNAPC5-208ENST00000568875 KLHDC9Q8NEP7 349 aa13.21□□□□□ -0.3
SNAPC5-208ENST00000568875 PDCL3Q9H2J4 239 aa13.21□□□□□ -0.3
SNAPC5-208ENST00000568875 ABCB11O95342 1321 aa13.21□□□□□ -0.3
SNAPC5-208ENST00000568875 MYH6P13533 1939 aa13.2□□□□□ -0.3
SNAPC5-208ENST00000568875 ZBTB5O15062 677 aa13.2□□□□□ -0.3
SNAPC5-208ENST00000568875 PPP1R11O60927 126 aaPredicted RBP13.2□□□□□ -0.3
SNAPC5-208ENST00000568875 NR1I2O75469 434 aa13.2□□□□□ -0.3
SNAPC5-208ENST00000568875 MYCNP04198 464 aaPredicted RBP13.2□□□□□ -0.3
SNAPC5-208ENST00000568875 ADCYAP1R1P41586 468 aa13.2□□□□□ -0.3
SNAPC5-208ENST00000568875 CCSAPQ6IQ19 270 aaPredicted RBP13.2□□□□□ -0.3
SNAPC5-208ENST00000568875 ZNF654Q8IZM8 581 aa13.2□□□□□ -0.3
SNAPC5-208ENST00000568875 DNERQ8NFT8 737 aa13.2□□□□□ -0.3
SNAPC5-208ENST00000568875 AMNQ9BXJ7 453 aa13.2□□□□□ -0.3
SNAPC5-208ENST00000568875 PHF24Q9UPV7 400 aa13.2□□□□□ -0.3
SNAPC5-208ENST00000568875 MRPL11Q9Y3B7 192 aaKnown RBP13.2□□□□□ -0.3
SNAPC5-208ENST00000568875 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 OPLAHO14841 1288 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 AP5Z1O43299 807 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 DDAH1O94760 285 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 EDNRBP24530 442 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 ATN1P54259 1190 aaPredicted RBP13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 GJA9P57773 515 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 NKX3-2P78367 333 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 IQSEC1Q6DN90 963 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 SLC39A5Q6ZMH5 540 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 C7orf61Q8IZ16 206 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 KIAA1524Q8TCG1 905 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 NUP133Q8WUM0 1156 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 TSEN34Q9BSV6 310 aaKnown RBP13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 LRRC2Q9BYS8 371 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 CBX8Q9HC52 389 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 PDGFCQ9NRA1 345 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 SYNRGQ9UMZ2 1314 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 COLQQ9Y215 455 aaPredicted RBP13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 GNEQ9Y223 722 aaKnown RBP13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 SZT2Q5T011 3432 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 DTNBO60941 627 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 SMARCA1P28370 1054 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 CDC25BP30305 580 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 IRX5P78411 483 aaPredicted RBP13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 TNFAIP2Q03169 654 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 SNX17Q15036 470 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 CAMK4Q16566 473 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 ANO6Q4KMQ2 910 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 EEPD1Q7L9B9 569 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 SGMS1Q86VZ5 419 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 MCF2L2Q86YR7 1114 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 SYTL5Q8TDW5 730 aaPredicted RBP13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 FERMT2Q96AC1 680 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 PIGSQ96S52 555 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 MYL10Q9BUA6 226 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 UPF3AQ9H1J1 476 aaKnown RBP13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 PRO3102Q9H379 93 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 VTA1Q9NP79 307 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 RTEL1Q9NZ71 1219 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 PCDHA1Q9Y5I3 950 aa13.19□□□□□ -0.3
SNAPC5-208ENST00000568875 PNMA6FA0A0J9YX94 578 aa13.18□□□□□ -0.3
SNAPC5-208ENST00000568875 A0A1W2PQ27 194 aa13.18□□□□□ -0.3
SNAPC5-208ENST00000568875 A0A1W2PQ64 194 aa13.18□□□□□ -0.3
SNAPC5-208ENST00000568875 A0A1W2PQD8 194 aa13.18□□□□□ -0.3
SNAPC5-208ENST00000568875 MYADML2A6NDP7 307 aa13.18□□□□□ -0.3
SNAPC5-208ENST00000568875 CCDC69A6NI79 296 aa13.18□□□□□ -0.3
SNAPC5-208ENST00000568875 SMPD1P17405 629 aa13.18□□□□□ -0.3
SNAPC5-208ENST00000568875 CST5P28325 142 aaPredicted RBP13.18□□□□□ -0.3
SNAPC5-208ENST00000568875 ZNF165P49910 485 aa13.18□□□□□ -0.3
SNAPC5-208ENST00000568875 GHRHRQ02643 423 aa13.18□□□□□ -0.3
SNAPC5-208ENST00000568875 KCNA10Q16322 511 aa13.18□□□□□ -0.3
SNAPC5-208ENST00000568875 TMEM63BQ5T3F8 832 aa13.18□□□□□ -0.3
SNAPC5-208ENST00000568875 C1orf53Q5VUE5 145 aa13.18□□□□□ -0.3
SNAPC5-208ENST00000568875 SARM1Q6SZW1 724 aa13.18□□□□□ -0.3
SNAPC5-208ENST00000568875 NFXL1Q6ZNB6 911 aa13.18□□□□□ -0.3
SNAPC5-208ENST00000568875 CCDC73Q6ZRK6 1079 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms