RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 NKRFO15226 690 aaKnown RBP eCLIP17.43■□□□□ 0.38
USB1-214ENST00000568848 SNHG28P0DPA3 235 aa17.43■□□□□ 0.38
USB1-214ENST00000568848 IL9P15248 144 aa17.43■□□□□ 0.38
USB1-214ENST00000568848 HOXD11P31277 338 aaPredicted RBP17.43■□□□□ 0.38
USB1-214ENST00000568848 ALX1Q15699 326 aa17.43■□□□□ 0.38
USB1-214ENST00000568848 BRDTQ58F21 947 aaPredicted RBP17.43■□□□□ 0.38
USB1-214ENST00000568848 TMEM31Q5JXX7 168 aa17.43■□□□□ 0.38
USB1-214ENST00000568848 ZNF618Q5T7W0 954 aa17.43■□□□□ 0.38
USB1-214ENST00000568848 VAT1LQ9HCJ6 419 aa17.43■□□□□ 0.38
USB1-214ENST00000568848 COG5Q9UP83 839 aa17.43■□□□□ 0.38
USB1-214ENST00000568848 SIP14410 1827 aa17.42■□□□□ 0.38
USB1-214ENST00000568848 GH1P01241 217 aa17.42■□□□□ 0.38
USB1-214ENST00000568848 KCNA5P22460 613 aa17.42■□□□□ 0.38
USB1-214ENST00000568848 PSEN2P49810 448 aa17.42■□□□□ 0.38
USB1-214ENST00000568848 TRIM71Q2Q1W2 868 aaKnown RBP17.42■□□□□ 0.38
USB1-214ENST00000568848 DNERQ8NFT8 737 aa17.42■□□□□ 0.38
USB1-214ENST00000568848 AFAP1L1Q8TED9 768 aa17.42■□□□□ 0.38
USB1-214ENST00000568848 GPKOWQ92917 476 aaPredicted RBP eCLIP17.42■□□□□ 0.38
USB1-214ENST00000568848 BCAS3Q9H6U6 928 aa17.42■□□□□ 0.38
USB1-214ENST00000568848 HELLSQ9NRZ9 838 aa17.42■□□□□ 0.38
USB1-214ENST00000568848 TCP11L1Q9NUJ3 509 aa17.42■□□□□ 0.38
USB1-214ENST00000568848 GTF2IRD1Q9UHL9 959 aa17.42■□□□□ 0.38
USB1-214ENST00000568848 WDR19Q8NEZ3 1342 aa17.42■□□□□ 0.38
USB1-214ENST00000568848 MYH6P13533 1939 aa17.41■□□□□ 0.38
USB1-214ENST00000568848 BAIAP3O94812 1187 aa17.41■□□□□ 0.38
USB1-214ENST00000568848 GJB5O95377 273 aa17.41■□□□□ 0.38
USB1-214ENST00000568848 PDE1AP54750 535 aa17.41■□□□□ 0.38
USB1-214ENST00000568848 PTPN11Q06124 597 aaPredicted RBP17.41■□□□□ 0.38
USB1-214ENST00000568848 MFSD10Q14728 455 aa17.41■□□□□ 0.38
USB1-214ENST00000568848 QRICH1Q2TAL8 776 aa17.41■□□□□ 0.38
USB1-214ENST00000568848 MCMDC2Q4G0Z9 681 aa17.41■□□□□ 0.38
USB1-214ENST00000568848 CNKSR3Q6P9H4 555 aa17.41■□□□□ 0.38
USB1-214ENST00000568848 ADGRF4Q8IZF3 695 aa17.41■□□□□ 0.38
USB1-214ENST00000568848 ANKS1AQ92625 1134 aa17.41■□□□□ 0.38
USB1-214ENST00000568848 EVI5LQ96CN4 794 aa17.41■□□□□ 0.38
USB1-214ENST00000568848 UBE2ZQ9H832 354 aaPredicted RBP17.41■□□□□ 0.38
USB1-214ENST00000568848 C5orf42Q9H799 3197 aa17.4■□□□□ 0.38
USB1-214ENST00000568848 OPLAHO14841 1288 aa17.4■□□□□ 0.38
USB1-214ENST00000568848 KPNA6O60684 536 aa17.4■□□□□ 0.38
USB1-214ENST00000568848 CXCL10P02778 98 aa17.4■□□□□ 0.38
USB1-214ENST00000568848 KIAA0753Q2KHM9 967 aa17.4■□□□□ 0.38
USB1-214ENST00000568848 MFSD6Q6ZSS7 791 aa17.4■□□□□ 0.38
USB1-214ENST00000568848 IL31RAQ8NI17 732 aa17.4■□□□□ 0.38
USB1-214ENST00000568848 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.4■□□□□ 0.38
USB1-214ENST00000568848 CAGE1Q8TC20 777 aa17.4■□□□□ 0.38
USB1-214ENST00000568848 RMDN3Q96TC7 470 aa17.4■□□□□ 0.38
USB1-214ENST00000568848 DDX41Q9UJV9 622 aaKnown RBP17.4■□□□□ 0.38
USB1-214ENST00000568848 TELO2Q9Y4R8 837 aa17.4■□□□□ 0.38
USB1-214ENST00000568848 MICAL3Q7RTP6 2002 aa17.39■□□□□ 0.37
USB1-214ENST00000568848 LOC102724159A0A0B4J2E5 919 aa17.39■□□□□ 0.37
USB1-214ENST00000568848 H3BQ06 376 aaPredicted RBP17.39■□□□□ 0.37
USB1-214ENST00000568848 DHX16O60231 1041 aaKnown RBP17.39■□□□□ 0.37
USB1-214ENST00000568848 CSPG5O95196 566 aa17.39■□□□□ 0.37
USB1-214ENST00000568848 PWP2Q15269 919 aaKnown RBP17.39■□□□□ 0.37
USB1-214ENST00000568848 C7orf31Q8N865 590 aa17.39■□□□□ 0.37
USB1-214ENST00000568848 CRBNQ96SW2 442 aa17.39■□□□□ 0.37
USB1-214ENST00000568848 HCN4Q9Y3Q4 1203 aa17.39■□□□□ 0.37
USB1-214ENST00000568848 CCDC171Q6TFL3 1326 aa17.39■□□□□ 0.37
USB1-214ENST00000568848 DOCK5Q9H7D0 1870 aa17.38■□□□□ 0.37
USB1-214ENST00000568848 B4E1Z4 1266 aa17.38■□□□□ 0.37
USB1-214ENST00000568848 PPP1R11O60927 126 aaPredicted RBP17.38■□□□□ 0.37
USB1-214ENST00000568848 KDM4AO75164 1064 aa17.38■□□□□ 0.37
USB1-214ENST00000568848 RGS20O76081 388 aa17.38■□□□□ 0.37
USB1-214ENST00000568848 MYCLP12524 364 aaPredicted RBP17.38■□□□□ 0.37
USB1-214ENST00000568848 CASTP20810 708 aaKnown RBP17.38■□□□□ 0.37
USB1-214ENST00000568848 ERVK-21P61565 698 aa17.38■□□□□ 0.37
USB1-214ENST00000568848 ARHGEF16Q5VV41 709 aa17.38■□□□□ 0.37
USB1-214ENST00000568848 SESTD1Q86VW0 696 aa17.38■□□□□ 0.37
USB1-214ENST00000568848 MYOCDQ8IZQ8 938 aa17.38■□□□□ 0.37
USB1-214ENST00000568848 STAG2Q8N3U4 1231 aa17.38■□□□□ 0.37
USB1-214ENST00000568848 CCDC155Q8N6L0 562 aa17.38■□□□□ 0.37
USB1-214ENST00000568848 PNMA1Q8ND90 353 aa17.38■□□□□ 0.37
USB1-214ENST00000568848 RILPL2Q969X0 211 aa17.38■□□□□ 0.37
USB1-214ENST00000568848 TGS1Q96RS0 853 aaKnown RBP17.38■□□□□ 0.37
USB1-214ENST00000568848 RAD9AQ99638 391 aa17.38■□□□□ 0.37
USB1-214ENST00000568848 MRVI1Q9Y6F6 885 aa17.38■□□□□ 0.37
USB1-214ENST00000568848 WDFY4Q6ZS81 3184 aa17.38■□□□□ 0.37
USB1-214ENST00000568848 LAMA4Q16363 1823 aa17.37■□□□□ 0.37
USB1-214ENST00000568848 ATG2AQ2TAZ0 1938 aa17.37■□□□□ 0.37
USB1-214ENST00000568848 PIEZO1Q92508 2521 aa17.37■□□□□ 0.37
USB1-214ENST00000568848 TRIM6-TRIM34B2RNG4 842 aa17.37■□□□□ 0.37
USB1-214ENST00000568848 CFBP00751 764 aa17.37■□□□□ 0.37
USB1-214ENST00000568848 CTSHP09668 335 aa17.37■□□□□ 0.37
USB1-214ENST00000568848 HOXA13P31271 388 aaPredicted RBP17.37■□□□□ 0.37
USB1-214ENST00000568848 SP2Q02086 613 aa17.37■□□□□ 0.37
USB1-214ENST00000568848 STXBP2Q15833 593 aa17.37■□□□□ 0.37
USB1-214ENST00000568848 DGKDQ16760 1214 aa17.37■□□□□ 0.37
USB1-214ENST00000568848 DBF4BQ8NFT6 615 aa17.37■□□□□ 0.37
USB1-214ENST00000568848 NSUN6Q8TEA1 469 aaKnown RBP17.37■□□□□ 0.37
USB1-214ENST00000568848 MPHOSPH6Q99547 160 aaKnown RBP17.37■□□□□ 0.37
USB1-214ENST00000568848 LNPKQ9C0E8 428 aa17.37■□□□□ 0.37
USB1-214ENST00000568848 JMJD4Q9H9V9 463 aa17.37■□□□□ 0.37
USB1-214ENST00000568848 PXMP2Q9NR77 195 aa17.37■□□□□ 0.37
USB1-214ENST00000568848 SUPT16HQ9Y5B9 1047 aaKnown RBP17.37■□□□□ 0.37
USB1-214ENST00000568848 ABCB11O95342 1321 aa17.37■□□□□ 0.37
USB1-214ENST00000568848 HAS3O00219 553 aa17.36■□□□□ 0.37
USB1-214ENST00000568848 LGR5O75473 907 aa17.36■□□□□ 0.37
USB1-214ENST00000568848 UPP2O95045 317 aa17.36■□□□□ 0.37
USB1-214ENST00000568848 F2P00734 622 aa17.36■□□□□ 0.37
USB1-214ENST00000568848 THPOP40225 353 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms