RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 KCTD19Q17RG1 926 aaPredicted RBP20.33■□□□□ 0.85
PKD1-235ENST00000568591 SOGA3Q5TF21 947 aa20.33■□□□□ 0.85
PKD1-235ENST00000568591 TTC19Q6DKK2 380 aaPredicted RBP20.33■□□□□ 0.85
PKD1-235ENST00000568591 LRRC55Q6ZSA7 311 aa20.33■□□□□ 0.85
PKD1-235ENST00000568591 AMOTL1Q8IY63 956 aa20.33■□□□□ 0.85
PKD1-235ENST00000568591 NARFQ9UHQ1 456 aa20.33■□□□□ 0.85
PKD1-235ENST00000568591 MAST2Q6P0Q8 1798 aa20.33■□□□□ 0.85
PKD1-235ENST00000568591 GOLGA6BA6NDN3 693 aa20.33■□□□□ 0.84
PKD1-235ENST00000568591 TACC1O75410 805 aa20.33■□□□□ 0.84
PKD1-235ENST00000568591 BAG3O95817 575 aa20.33■□□□□ 0.84
PKD1-235ENST00000568591 MCM3P25205 808 aa20.33■□□□□ 0.84
PKD1-235ENST00000568591 GNA11P29992 359 aa20.33■□□□□ 0.84
PKD1-235ENST00000568591 AMPD3Q01432 767 aa20.33■□□□□ 0.84
PKD1-235ENST00000568591 GOLGA6L1Q8N7Z2 621 aa20.33■□□□□ 0.84
PKD1-235ENST00000568591 TSEN2Q8NCE0 465 aaKnown RBP20.33■□□□□ 0.84
PKD1-235ENST00000568591 POLD4Q9HCU8 107 aa20.33■□□□□ 0.84
PKD1-235ENST00000568591 SEC63Q9UGP8 760 aaKnown RBP20.33■□□□□ 0.84
PKD1-235ENST00000568591 SLC20A2Q08357 652 aa20.32■□□□□ 0.84
PKD1-235ENST00000568591 TPTE2Q6XPS3 522 aa20.32■□□□□ 0.84
PKD1-235ENST00000568591 LRRC47Q8N1G4 583 aaKnown RBP20.32■□□□□ 0.84
PKD1-235ENST00000568591 FNBP4Q8N3X1 1017 aaPredicted RBP20.32■□□□□ 0.84
PKD1-235ENST00000568591 WDR66Q8TBY9 1149 aa20.32■□□□□ 0.84
PKD1-235ENST00000568591 DDX12PQ92771 950 aa20.32■□□□□ 0.84
PKD1-235ENST00000568591 TANGO6Q9C0B7 1094 aa20.32■□□□□ 0.84
PKD1-235ENST00000568591 NYXQ9GZU5 481 aa20.32■□□□□ 0.84
PKD1-235ENST00000568591 TBC1D7Q9P0N9 293 aa20.32■□□□□ 0.84
PKD1-235ENST00000568591 FAM184BQ9ULE4 1060 aa20.32■□□□□ 0.84
PKD1-235ENST00000568591 SPATA31A5Q5VU36 1347 aa20.32■□□□□ 0.84
PKD1-235ENST00000568591 SPATA31A7Q8IWB4 1347 aa20.32■□□□□ 0.84
PKD1-235ENST00000568591 USO1O60763 962 aaKnown RBP20.32■□□□□ 0.84
PKD1-235ENST00000568591 KCNMA1Q12791 1236 aa20.32■□□□□ 0.84
PKD1-235ENST00000568591 MAN2A1Q16706 1144 aa20.32■□□□□ 0.84
PKD1-235ENST00000568591 UNC13DQ70J99 1090 aa20.32■□□□□ 0.84
PKD1-235ENST00000568591 TSGA10Q9BZW7 698 aa20.32■□□□□ 0.84
PKD1-235ENST00000568591 RBM12Q9NTZ6 932 aaKnown RBP20.32■□□□□ 0.84
PKD1-235ENST00000568591 THRAP3Q9Y2W1 955 aaKnown RBP20.32■□□□□ 0.84
PKD1-235ENST00000568591 ZSCAN5CA6NGD5 496 aaPredicted RBP20.31■□□□□ 0.84
PKD1-235ENST00000568591 MAGEA1P43355 309 aa20.31■□□□□ 0.84
PKD1-235ENST00000568591 UBE2SQ16763 222 aa20.31■□□□□ 0.84
PKD1-235ENST00000568591 FAM98CQ17RN3 349 aaKnown RBP20.31■□□□□ 0.84
PKD1-235ENST00000568591 DNAJC21Q5F1R6 531 aaKnown RBP20.31■□□□□ 0.84
PKD1-235ENST00000568591 FAM182BQ5T319 152 aa20.31■□□□□ 0.84
PKD1-235ENST00000568591 HAUS3Q68CZ6 603 aa20.31■□□□□ 0.84
PKD1-235ENST00000568591 MMGT1Q8N4V1 131 aa20.31■□□□□ 0.84
PKD1-235ENST00000568591 TLR10Q9BXR5 811 aa20.31■□□□□ 0.84
PKD1-235ENST00000568591 PPP4CP60510 307 aa20.31■□□□□ 0.84
PKD1-235ENST00000568591 CACNB1Q02641 598 aaPredicted RBP20.31■□□□□ 0.84
PKD1-235ENST00000568591 HGSNATQ68CP4 663 aa20.31■□□□□ 0.84
PKD1-235ENST00000568591 C16orf86Q6ZW13 317 aa20.31■□□□□ 0.84
PKD1-235ENST00000568591 TEX11Q8IYF3 940 aa20.31■□□□□ 0.84
PKD1-235ENST00000568591 NEDD1Q8NHV4 660 aa20.31■□□□□ 0.84
PKD1-235ENST00000568591 SNX29Q8TEQ0 813 aa20.31■□□□□ 0.84
PKD1-235ENST00000568591 LZTS2Q9BRK4 669 aa20.31■□□□□ 0.84
PKD1-235ENST00000568591 ENOX2Q16206 610 aaKnown RBP20.3■□□□□ 0.84
PKD1-235ENST00000568591 CDK5RAP3Q96JB5 506 aa20.3■□□□□ 0.84
PKD1-235ENST00000568591 DDX60LQ5H9U9 1706 aaKnown RBP20.3■□□□□ 0.84
PKD1-235ENST00000568591 ESYT3A0FGR9 886 aa20.3■□□□□ 0.84
PKD1-235ENST00000568591 GOLGA6CA6NDK9 693 aa20.3■□□□□ 0.84
PKD1-235ENST00000568591 TLR2O60603 784 aa20.3■□□□□ 0.84
PKD1-235ENST00000568591 GOLGA6DP0CG33 693 aa20.3■□□□□ 0.84
PKD1-235ENST00000568591 ASTE1Q2TB18 679 aaPredicted RBP20.3■□□□□ 0.84
PKD1-235ENST00000568591 GOLGA6AQ9NYA3 693 aa20.3■□□□□ 0.84
PKD1-235ENST00000568591 TNRC6CQ9HCJ0 1690 aaKnown RBP20.29■□□□□ 0.84
PKD1-235ENST00000568591 LCA5LO95447 670 aa20.29■□□□□ 0.84
PKD1-235ENST00000568591 TNNI2P48788 182 aa20.29■□□□□ 0.84
PKD1-235ENST00000568591 SEMA3FQ13275 785 aa20.29■□□□□ 0.84
PKD1-235ENST00000568591 TDRD12Q587J7 1177 aaKnown RBP20.29■□□□□ 0.84
PKD1-235ENST00000568591 KLHDC7AQ5VTJ3 777 aa20.29■□□□□ 0.84
PKD1-235ENST00000568591 RAD54LQ92698 747 aa20.29■□□□□ 0.84
PKD1-235ENST00000568591 TSPYL1Q9H0U9 437 aa20.29■□□□□ 0.84
PKD1-235ENST00000568591 PACSIN2Q9UNF0 486 aaPredicted RBP20.29■□□□□ 0.84
PKD1-235ENST00000568591 NAV1Q8NEY1 1877 aa20.29■□□□□ 0.84
PKD1-235ENST00000568591 SLURP2P0DP57 97 aa20.29■□□□□ 0.84
PKD1-235ENST00000568591 PDHBP11177 359 aa20.29■□□□□ 0.84
PKD1-235ENST00000568591 NAP1L1P55209 391 aaKnown RBP20.29■□□□□ 0.84
PKD1-235ENST00000568591 COBLL1Q53SF7 1204 aa20.29■□□□□ 0.84
PKD1-235ENST00000568591 PDXDC1Q6P996 788 aa20.29■□□□□ 0.84
PKD1-235ENST00000568591 GUF1Q8N442 669 aaKnown RBP20.29■□□□□ 0.84
PKD1-235ENST00000568591 ARL8AQ96BM9 186 aa20.29■□□□□ 0.84
PKD1-235ENST00000568591 GPCPD1Q9NPB8 672 aa20.29■□□□□ 0.84
PKD1-235ENST00000568591 NOL4O94818 638 aa20.28■□□□□ 0.84
PKD1-235ENST00000568591 BRD2P25440 801 aaKnown RBP20.28■□□□□ 0.84
PKD1-235ENST00000568591 RNASE9P60153 205 aaKnown RBP20.28■□□□□ 0.84
PKD1-235ENST00000568591 ARID5AQ03989 594 aa20.28■□□□□ 0.84
PKD1-235ENST00000568591 CCDC181Q5TID7 509 aa20.28■□□□□ 0.84
PKD1-235ENST00000568591 CACNA2D4Q7Z3S7 1137 aa20.28■□□□□ 0.84
PKD1-235ENST00000568591 FAM76AQ8TAV0 307 aa20.28■□□□□ 0.84
PKD1-235ENST00000568591 HYOU1Q9Y4L1 999 aa20.28■□□□□ 0.84
PKD1-235ENST00000568591 CNTNAP4Q9C0A0 1308 aa20.28■□□□□ 0.84
PKD1-235ENST00000568591 SBF2Q86WG5 1849 aa20.28■□□□□ 0.84
PKD1-235ENST00000568591 PPFIA4O75335 1185 aa20.28■□□□□ 0.84
PKD1-235ENST00000568591 IQCEQ6IPM2 695 aa20.28■□□□□ 0.84
PKD1-235ENST00000568591 DNAAF5Q86Y56 855 aa20.28■□□□□ 0.84
PKD1-235ENST00000568591 ARHGEF1Q92888 912 aaKnown RBP20.28■□□□□ 0.84
PKD1-235ENST00000568591 NPHP3-ACAD11A0A0J9YXS1 232 aa20.27■□□□□ 0.84
PKD1-235ENST00000568591 FTCDO95954 541 aa20.27■□□□□ 0.84
PKD1-235ENST00000568591 SSBP05455 408 aaKnown RBP eCLIP20.27■□□□□ 0.84
PKD1-235ENST00000568591 RHBDL3P58872 404 aa20.27■□□□□ 0.84
PKD1-235ENST00000568591 GSTO1P78417 241 aa20.27■□□□□ 0.84
PKD1-235ENST00000568591 NELFCDQ8IXH7 590 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms