RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 MAP3K20Q9NYL2 800 aaKnown RBP5.56□□□□□ -1.52
CLK3-219ENST00000567805 TBX21Q9UL17 535 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 PCDHA1Q9Y5I3 950 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 GBF1Q92538 1859 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 DOCK5Q9H7D0 1870 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 PNMA6FA0A0J9YX94 578 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 OPLAHO14841 1288 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 SLC27A2O14975 620 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 PRC1O43663 620 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 CYTH3O43739 400 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 KPNA6O60684 536 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 PPP1R11O60927 126 aaPredicted RBP5.55□□□□□ -1.52
CLK3-219ENST00000567805 DDAH1O94760 285 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 CFBP00751 764 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 TXNP10599 105 aaKnown RBP5.55□□□□□ -1.52
CLK3-219ENST00000567805 PTGS1P23219 599 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 SMARCA1P28370 1054 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 KIF5BP33176 963 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 LIFRP42702 1097 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 PURAQ00577 322 aaKnown RBP5.55□□□□□ -1.52
CLK3-219ENST00000567805 FPGSQ05932 587 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 ITGA7Q13683 1181 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 TTLL4Q14679 1199 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 NECTIN1Q15223 517 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 SHHQ15465 462 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 STXBP2Q15833 593 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 BRDTQ58F21 947 aaPredicted RBP5.55□□□□□ -1.52
CLK3-219ENST00000567805 RNF20Q5VTR2 975 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 ARHGEF16Q5VV41 709 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 CREB3L3Q68CJ9 461 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 FAM109BQ6ICB4 259 aaPredicted RBP5.55□□□□□ -1.52
CLK3-219ENST00000567805 MFSD5Q6N075 450 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 HOMER1Q86YM7 354 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 ZNF654Q8IZM8 581 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 TMTC2Q8N394 836 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 DEFB123Q8N688 67 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 CTCFLQ8NI51 663 aaPredicted RBP5.55□□□□□ -1.52
CLK3-219ENST00000567805 SYTL5Q8TDW5 730 aaPredicted RBP5.55□□□□□ -1.52
CLK3-219ENST00000567805 TBC1D5Q92609 795 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 TMEM87BQ96K49 555 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 TAAR1Q96RJ0 339 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 PIGSQ96S52 555 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 MTG1Q9BT17 334 aaPredicted RBP5.55□□□□□ -1.52
CLK3-219ENST00000567805 SPZ1Q9BXG8 430 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 LY9Q9HBG7 655 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 SENP2Q9HC62 589 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 GPHNQ9NQX3 736 aaPredicted RBP5.55□□□□□ -1.52
CLK3-219ENST00000567805 PXMP2Q9NR77 195 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 COL20A1Q9P218 1284 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 A0A0C4DFX4 3053 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 SCN5AQ14524 2016 aa5.55□□□□□ -1.52
CLK3-219ENST00000567805 TRIP12Q14669 1992 aaPredicted RBP5.55□□□□□ -1.52
CLK3-219ENST00000567805 REV3LO60673 3130 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 CHD9Q3L8U1 2897 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 GRIN2DO15399 1336 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 CCDC69A6NI79 296 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 A6NJR5 290 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 STK25O00506 426 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 SH2B2O14492 632 aaPredicted RBP5.54□□□□□ -1.52
CLK3-219ENST00000567805 B4GALT4O60513 344 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 CDC45O75419 566 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 EIF3JO75822 258 aaKnown RBP5.54□□□□□ -1.52
CLK3-219ENST00000567805 ARIH2O95376 493 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 GH1P01241 217 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 NR3C2P08235 984 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 MYL3P08590 195 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 SUPT20HL2P0C7V6 817 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 CALM1P0DP23 149 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 CALM2P0DP24 149 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 CALM3P0DP25 149 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 EIF2AK2P19525 551 aaKnown RBP5.54□□□□□ -1.52
CLK3-219ENST00000567805 GNAQP50148 359 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 SMAD3P84022 425 aaKnown RBP5.54□□□□□ -1.52
CLK3-219ENST00000567805 PPIGQ13427 754 aaKnown RBP eCLIP5.54□□□□□ -1.521e-6■□□□□ 11.2
CLK3-219ENST00000567805 SLC35G1Q2M3R5 365 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 C9orf50Q5SZB4 431 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 NFRKBQ6P4R8 1299 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 CCDC62Q6P9F0 684 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 KCNV1Q6PIU1 500 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 NFXL1Q6ZNB6 911 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 SEPT14Q6ZU15 432 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 SKAP1Q86WV1 359 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 TMEM199Q8N511 208 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 EMID1Q96A84 441 aaPredicted RBP5.54□□□□□ -1.52
CLK3-219ENST00000567805 RRP36Q96EU6 259 aaKnown RBP5.54□□□□□ -1.52
CLK3-219ENST00000567805 CCDC136Q96JN2 1154 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 RNPC3Q96LT9 517 aaKnown RBP5.54□□□□□ -1.52
CLK3-219ENST00000567805 LZTS2Q9BRK4 669 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 ALDH8A1Q9H2A2 487 aaPredicted RBP5.54□□□□□ -1.52
CLK3-219ENST00000567805 HIPK3Q9H422 1215 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 MTMR10Q9NXD2 777 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 SEC63Q9UGP8 760 aaKnown RBP5.54□□□□□ -1.52
CLK3-219ENST00000567805 MRVI1Q9Y6F6 885 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 CHD7Q9P2D1 2997 aa5.54□□□□□ -1.52
CLK3-219ENST00000567805 FRMPD4Q14CM0 1322 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 TRANK1O15050 2925 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 GCOM1H8Y6P7 765 aaPredicted RBP5.53□□□□□ -1.52
CLK3-219ENST00000567805 STAM2O75886 525 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 MMP3P08254 477 aa5.53□□□□□ -1.52
CLK3-219ENST00000567805 POLR2MP0CAP2 368 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms