RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 OSBPL9Q96SU4 736 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 CUEDC2Q9H467 287 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 KDM3AQ9Y4C1 1321 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 PPP1R37O75864 691 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 PPP2R2AP63151 447 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 PPP2R5DQ14738 602 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 DBN1Q16643 649 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 TPH2Q8IWU9 490 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 L2HGDHQ9H9P8 463 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 PPP1R1BQ9UD71 204 aaPredicted RBP13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 NLRP1Q9C000 1473 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 PLEKHG3A1L390 1219 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 LGALS16A8MUM7 142 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 DDX39AO00148 427 aaKnown RBP13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 BACH1O14867 736 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 EIF3HO15372 352 aaKnown RBP eCLIP13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 KCNA6P17658 529 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 DR1Q01658 176 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 C6orf118Q5T5N4 469 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 SHC4Q6S5L8 630 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 ARHGAP31Q2M1Z3 1444 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 AP5Z1O43299 807 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 PPFIA2O75334 1257 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 SERPING1P05155 500 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 PDE6CP51160 858 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 IRAK1P51617 712 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 GPR108Q9NPR9 543 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 BCAP29Q9UHQ4 241 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 ABCC12Q96J65 1359 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 MAP3K7O43318 606 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 RFC4P35249 363 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 MSH2P43246 934 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 BCAMP50895 628 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 LRRC1Q9BTT6 524 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 GLT8D2Q9H1C3 349 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 VIPAS39Q9H9C1 493 aa13.5□□□□□ -0.25
CSPG4P13-202ENST00000567704 AATKQ6ZMQ8 1374 aa13.49□□□□□ -0.25
CSPG4P13-202ENST00000567704 DDAH1O94760 285 aa13.49□□□□□ -0.25
CSPG4P13-202ENST00000567704 LMNB1P20700 586 aa13.49□□□□□ -0.25
CSPG4P13-202ENST00000567704 HNRNPH1P31943 449 aaKnown RBP13.49□□□□□ -0.25
CSPG4P13-202ENST00000567704 DNAJC10Q8IXB1 793 aa13.49□□□□□ -0.25
CSPG4P13-202ENST00000567704 RSAD2Q8WXG1 361 aa13.49□□□□□ -0.25
CSPG4P13-202ENST00000567704 DNAJC17Q9NVM6 304 aaKnown RBP13.49□□□□□ -0.25
CSPG4P13-202ENST00000567704 SNX24Q9Y343 169 aa13.49□□□□□ -0.25
CSPG4P13-202ENST00000567704 STRN3Q13033 797 aa13.49□□□□□ -0.25
CSPG4P13-202ENST00000567704 ZC3H18Q86VM9 953 aaKnown RBP13.49□□□□□ -0.25
CSPG4P13-202ENST00000567704 PPM1KQ8N3J5 372 aa13.49□□□□□ -0.25
CSPG4P13-202ENST00000567704 TGFBRAP1Q8WUH2 860 aa13.49□□□□□ -0.25
CSPG4P13-202ENST00000567704 COL4A3BPQ9Y5P4 624 aa13.49□□□□□ -0.25
CSPG4P13-202ENST00000567704 GMNNO75496 209 aa13.49□□□□□ -0.25
CSPG4P13-202ENST00000567704 ACSL3O95573 720 aa13.49□□□□□ -0.25
CSPG4P13-202ENST00000567704 RNASELQ05823 741 aaKnown RBP13.49□□□□□ -0.25
CSPG4P13-202ENST00000567704 SPATA4Q8NEY3 305 aa13.49□□□□□ -0.25
CSPG4P13-202ENST00000567704 CCT8L2Q96SF2 557 aa13.49□□□□□ -0.25
CSPG4P13-202ENST00000567704 SPZ1Q9BXG8 430 aa13.49□□□□□ -0.25
CSPG4P13-202ENST00000567704 HAUS2Q9NVX0 235 aa13.49□□□□□ -0.25
CSPG4P13-202ENST00000567704 FGGP02679 453 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 MAN1A1P33908 653 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 CACNB1Q02641 598 aaPredicted RBP13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 SEPT2Q15019 361 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 KAZNQ674X7 775 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 FAM47EQ6ZV65 393 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 BBOF1Q8ND07 529 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 FUT8Q9BYC5 575 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 MLXIPLQ9NP71 852 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 TARSL2A2RTX5 802 aaKnown RBP13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 ENO4A6NNW6 628 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 ZNF185O15231 689 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 ECEL1O95672 775 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 ADCY2Q08462 1091 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 ALKBH5Q6P6C2 394 aaKnown RBP13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 TPTE2Q6XPS3 522 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 MIER3Q7Z3K6 550 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 ZNF354CQ86Y25 554 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 NOA1Q8NC60 698 aaKnown RBP13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 ATP2A3Q93084 1043 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 PITPNM3Q9BZ71 974 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 WDR91A4D1P6 747 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 CCDC188H7C350 402 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 MYO1FO00160 1098 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 PRKAB2O43741 272 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 GFPT2O94808 682 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 SLC1A4P43007 532 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 TMED1Q13445 227 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 USH1GQ495M9 461 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 PPP4R1Q8TF05 950 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 EXOC7Q9UPT5 735 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 KIAA1024Q9UPX6 916 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 TET3O43151 1660 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 CD19P15391 556 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 TRPC3Q13507 836 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 BSPRYQ5W0U4 402 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 ZNF473Q8WTR7 871 aaKnown RBP13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 IL17RAQ96F46 866 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 CHP1Q99653 195 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 PCDH11XQ9BZA7 1347 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 PCDH11YQ9BZA8 1340 aa13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 TSPYL2Q9H2G4 693 aaPredicted RBP13.48□□□□□ -0.25
CSPG4P13-202ENST00000567704 RAB20Q9NX57 234 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms