RNA–Protein interactions for RNA: ENST00000567479.1

KIFC3-231, Transcript of kinesin family member C3, human

TSL 4

Gene KIFC3, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-231	ENST00000567479	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
KIFC3-231	ENST00000567479	SPZ1	Q9BXG8	430 aa		10.87	□□□□□ -0.67
KIFC3-231	ENST00000567479	SEC63	Q9UGP8	760 aa	Known RBP	10.87	□□□□□ -0.67
KIFC3-231	ENST00000567479	MRVI1	Q9Y6F6	885 aa		10.87	□□□□□ -0.67
KIFC3-231	ENST00000567479	FGB	P02675	491 aa		10.86	□□□□□ -0.67
KIFC3-231	ENST00000567479	ACR	P10323	421 aa		10.86	□□□□□ -0.67
KIFC3-231	ENST00000567479	RXRA	P19793	462 aa		10.86	□□□□□ -0.67
KIFC3-231	ENST00000567479	CCND2	P30279	289 aa		10.86	□□□□□ -0.67
KIFC3-231	ENST00000567479	CCL23	P55773	120 aa		10.86	□□□□□ -0.67
KIFC3-231	ENST00000567479	CHMP4BP1	P59074	171 aa		10.86	□□□□□ -0.67
KIFC3-231	ENST00000567479	PTPN11	Q06124	597 aa	Predicted RBP	10.86	□□□□□ -0.67
KIFC3-231	ENST00000567479	ARHGAP1	Q07960	439 aa		10.86	□□□□□ -0.67
KIFC3-231	ENST00000567479	PGM5	Q15124	567 aa		10.86	□□□□□ -0.67
KIFC3-231	ENST00000567479	TMEM240	Q5SV17	173 aa		10.86	□□□□□ -0.67
KIFC3-231	ENST00000567479	RPUSD2	Q8IZ73	545 aa	Known RBP	10.86	□□□□□ -0.67
KIFC3-231	ENST00000567479	SRBD1	Q8N5C6	995 aa	Known RBP	10.86	□□□□□ -0.67
KIFC3-231	ENST00000567479	FANCB	Q8NB91	859 aa		10.86	□□□□□ -0.67
KIFC3-231	ENST00000567479	CUL5	Q93034	780 aa		10.86	□□□□□ -0.67
KIFC3-231	ENST00000567479	FAM161B	Q96MY7	647 aa		10.86	□□□□□ -0.67
KIFC3-231	ENST00000567479	LRRC2	Q9BYS8	371 aa		10.86	□□□□□ -0.67
KIFC3-231	ENST00000567479	IL23A	Q9NPF7	189 aa		10.86	□□□□□ -0.67
KIFC3-231	ENST00000567479	TRMT13	Q9NUP7	481 aa	Known RBP	10.86	□□□□□ -0.67
KIFC3-231	ENST00000567479	STXBP5L	Q9Y2K9	1186 aa		10.86	□□□□□ -0.67
KIFC3-231	ENST00000567479	SZT2	Q5T011	3432 aa		10.86	□□□□□ -0.67
KIFC3-231	ENST00000567479	UMODL1	Q5DID0	1318 aa		10.85	□□□□□ -0.67
KIFC3-231	ENST00000567479	PLEKHA8P1	O95397	391 aa		10.85	□□□□□ -0.67
KIFC3-231	ENST00000567479	MMP3	P08254	477 aa		10.85	□□□□□ -0.67
KIFC3-231	ENST00000567479	TGFB3	P10600	412 aa		10.85	□□□□□ -0.67
KIFC3-231	ENST00000567479	CYP2C9	P11712	490 aa		10.85	□□□□□ -0.67
KIFC3-231	ENST00000567479	EXOSC10	Q01780	885 aa	Known RBP	10.85	□□□□□ -0.67
KIFC3-231	ENST00000567479	COL9A3	Q14050	684 aa	Predicted RBP	10.85	□□□□□ -0.67
KIFC3-231	ENST00000567479	DGKD	Q16760	1214 aa		10.85	□□□□□ -0.67
KIFC3-231	ENST00000567479	TSGA10IP	Q3SY00	556 aa		10.85	□□□□□ -0.67
KIFC3-231	ENST00000567479	PSRC1	Q6PGN9	363 aa	Predicted RBP	10.85	□□□□□ -0.67
KIFC3-231	ENST00000567479	ZNF365	Q70YC5	407 aa		10.85	□□□□□ -0.67
KIFC3-231	ENST00000567479	DHX32	Q7L7V1	743 aa	Known RBP	10.85	□□□□□ -0.67
KIFC3-231	ENST00000567479	SGMS1	Q86VZ5	419 aa		10.85	□□□□□ -0.67
KIFC3-231	ENST00000567479	CMTR1	Q8N1G2	835 aa	Known RBP	10.85	□□□□□ -0.67
KIFC3-231	ENST00000567479	CCDC82	Q8N4S0	544 aa		10.85	□□□□□ -0.67
KIFC3-231	ENST00000567479	SMARCC2	Q8TAQ2	1214 aa		10.85	□□□□□ -0.67
KIFC3-231	ENST00000567479	EMID1	Q96A84	441 aa	Predicted RBP	10.85	□□□□□ -0.67
KIFC3-231	ENST00000567479	NOC4L	Q9BVI4	516 aa	Known RBP	10.85	□□□□□ -0.67
KIFC3-231	ENST00000567479	SEMA6B	Q9H3T3	888 aa		10.85	□□□□□ -0.67
KIFC3-231	ENST00000567479	LAMA3	Q16787	3333 aa		10.85	□□□□□ -0.67
KIFC3-231	ENST00000567479	LCT	P09848	1927 aa		10.84	□□□□□ -0.67
KIFC3-231	ENST00000567479	PPFIA4	O75335	1185 aa		10.84	□□□□□ -0.67
KIFC3-231	ENST00000567479	STAM2	O75886	525 aa		10.84	□□□□□ -0.67
KIFC3-231	ENST00000567479	RGS20	O76081	388 aa		10.84	□□□□□ -0.67
KIFC3-231	ENST00000567479	KRT32	Q14532	448 aa		10.84	□□□□□ -0.67
KIFC3-231	ENST00000567479	GNPTAB	Q3T906	1256 aa		10.84	□□□□□ -0.67
KIFC3-231	ENST00000567479	CELF3	Q5SZQ8	465 aa	Known RBP	10.84	□□□□□ -0.67
KIFC3-231	ENST00000567479	MYSM1	Q5VVJ2	828 aa		10.84	□□□□□ -0.67
KIFC3-231	ENST00000567479	USP17L6P	Q6QN14	398 aa		10.84	□□□□□ -0.67
KIFC3-231	ENST00000567479	RAB11FIP4	Q86YS3	637 aa		10.84	□□□□□ -0.67
KIFC3-231	ENST00000567479	RASEF	Q8IZ41	740 aa		10.84	□□□□□ -0.67
KIFC3-231	ENST00000567479	RETREG2	Q8NC44	543 aa		10.84	□□□□□ -0.67
KIFC3-231	ENST00000567479	PPP1R13L	Q8WUF5	828 aa		10.84	□□□□□ -0.67
KIFC3-231	ENST00000567479	HERVK_113	Q902F9	699 aa		10.84	□□□□□ -0.67
KIFC3-231	ENST00000567479	ZFP91	Q96JP5	570 aa	Predicted RBP	10.84	□□□□□ -0.67
KIFC3-231	ENST00000567479	WNT8A	Q9H1J5	351 aa		10.84	□□□□□ -0.67
KIFC3-231	ENST00000567479	MLXIP	Q9HAP2	919 aa		10.84	□□□□□ -0.67
KIFC3-231	ENST00000567479	NOD1	Q9Y239	953 aa		10.84	□□□□□ -0.67
KIFC3-231	ENST00000567479	LTBP2	Q14767	1821 aa		10.84	□□□□□ -0.67
KIFC3-231	ENST00000567479	PIK3CD	O00329	1044 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	MEIS2	O14770	477 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	GGPS1	O95749	300 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	NEFL	P07196	543 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	HMGB1	P09429	215 aa	Known RBP	10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	SP2	Q02086	613 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	BFSP2	Q13515	415 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	PTGIS	Q16647	500 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	ADCK5	Q3MIX3	580 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	RASIP1	Q5U651	963 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	TMTC3	Q6ZXV5	915 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	OTOP2	Q7RTS6	562 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	SESTD1	Q86VW0	696 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	MICU3	Q86XE3	530 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	C7orf31	Q8N865	590 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	SLC17A8	Q8NDX2	589 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	IL31RA	Q8NI17	732 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	PPTC7	Q8NI37	304 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	KAT2B	Q92831	832 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	SCLY	Q96I15	445 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	SPATA33	Q96N06	139 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	GUCD1	Q96NT3	240 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	KATNAL1	Q9BW62	490 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	MTIF3	Q9H2K0	278 aa	Known RBP	10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	PSTPIP2	Q9H939	334 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	RTEL1	Q9NZ71	1219 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	LRRC37A2	A6NM11	1700 aa		10.83	□□□□□ -0.68
KIFC3-231	ENST00000567479	TMEM265	A0A087WTH1	108 aa		10.82	□□□□□ -0.68
KIFC3-231	ENST00000567479	hCG_1642624	A0A1W2PR95	340 aa		10.82	□□□□□ -0.68
KIFC3-231	ENST00000567479	SPATA31C2	B4DYI2	1134 aa		10.82	□□□□□ -0.68
KIFC3-231	ENST00000567479	SORBS3	O60504	671 aa		10.82	□□□□□ -0.68
KIFC3-231	ENST00000567479	ICAM3	P32942	547 aa		10.82	□□□□□ -0.68
KIFC3-231	ENST00000567479	PSEN2	P49810	448 aa		10.82	□□□□□ -0.68
KIFC3-231	ENST00000567479	MRPS9	P82933	396 aa	Known RBP	10.82	□□□□□ -0.68
KIFC3-231	ENST00000567479	FGD1	P98174	961 aa		10.82	□□□□□ -0.68
KIFC3-231	ENST00000567479	MFSD10	Q14728	455 aa		10.82	□□□□□ -0.68
KIFC3-231	ENST00000567479	HSDL1	Q3SXM5	330 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms