RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 MMP3P08254 477 aa21.68■■□□□ 1.06
IFT140-208ENST00000566818 CSF2RAP15509 400 aa21.68■■□□□ 1.06
IFT140-208ENST00000566818 CYP2C18P33260 490 aa21.68■■□□□ 1.06
IFT140-208ENST00000566818 PTPN11Q06124 597 aaPredicted RBP21.68■■□□□ 1.06
IFT140-208ENST00000566818 KRT32Q14532 448 aa21.68■■□□□ 1.06
IFT140-208ENST00000566818 NFRKBQ6P4R8 1299 aa21.68■■□□□ 1.06
IFT140-208ENST00000566818 FCHSD1Q86WN1 690 aa21.68■■□□□ 1.06
IFT140-208ENST00000566818 AFG1LQ8WV93 481 aa21.68■■□□□ 1.06
IFT140-208ENST00000566818 CUL5Q93034 780 aa21.68■■□□□ 1.06
IFT140-208ENST00000566818 NEK1Q96PY6 1258 aa21.68■■□□□ 1.06
IFT140-208ENST00000566818 NOC4LQ9BVI4 516 aaKnown RBP21.68■■□□□ 1.06
IFT140-208ENST00000566818 PLEKHA8P1O95397 391 aa21.67■■□□□ 1.06
IFT140-208ENST00000566818 NBPF20Q3BBV1 942 aa21.67■■□□□ 1.06
IFT140-208ENST00000566818 SGMS1Q86VZ5 419 aa21.67■■□□□ 1.06
IFT140-208ENST00000566818 EMID1Q96A84 441 aaPredicted RBP21.67■■□□□ 1.06
IFT140-208ENST00000566818 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.67■■□□□ 1.063e-14■■□□□ 13.8
IFT140-208ENST00000566818 LRRC2Q9BYS8 371 aa21.67■■□□□ 1.06
IFT140-208ENST00000566818 MTMR10Q9NXD2 777 aa21.67■■□□□ 1.06
IFT140-208ENST00000566818 DDX41Q9UJV9 622 aaKnown RBP21.67■■□□□ 1.06
IFT140-208ENST00000566818 RXRAP19793 462 aa21.66■■□□□ 1.06
IFT140-208ENST00000566818 CASTP20810 708 aaKnown RBP21.66■■□□□ 1.06
IFT140-208ENST00000566818 LAMC2Q13753 1193 aa21.66■■□□□ 1.06
IFT140-208ENST00000566818 DGKDQ16760 1214 aa21.66■■□□□ 1.06
IFT140-208ENST00000566818 VSIG10LQ86VR7 867 aa21.66■■□□□ 1.06
IFT140-208ENST00000566818 MICU3Q86XE3 530 aa21.66■■□□□ 1.06
IFT140-208ENST00000566818 MTIF3Q9H2K0 278 aaKnown RBP21.66■■□□□ 1.06
IFT140-208ENST00000566818 IL23AQ9NPF7 189 aa21.66■■□□□ 1.06
IFT140-208ENST00000566818 TRMT13Q9NUP7 481 aaKnown RBP21.66■■□□□ 1.06
IFT140-208ENST00000566818 FRMPD4Q14CM0 1322 aa21.65■■□□□ 1.06
IFT140-208ENST00000566818 TSGA10IPQ3SY00 556 aa21.65■■□□□ 1.06
IFT140-208ENST00000566818 TMEM240Q5SV17 173 aa21.65■■□□□ 1.06
IFT140-208ENST00000566818 DHX37Q8IY37 1157 aaKnown RBP21.65■■□□□ 1.06
IFT140-208ENST00000566818 SRBD1Q8N5C6 995 aaKnown RBP21.65■■□□□ 1.06
IFT140-208ENST00000566818 IL31RAQ8NI17 732 aa21.65■■□□□ 1.06
IFT140-208ENST00000566818 PPTC7Q8NI37 304 aa21.65■■□□□ 1.06
IFT140-208ENST00000566818 SMARCC2Q8TAQ2 1214 aa21.65■■□□□ 1.06
IFT140-208ENST00000566818 NOD1Q9Y239 953 aa21.65■■□□□ 1.06
IFT140-208ENST00000566818 UMODL1Q5DID0 1318 aa21.64■■□□□ 1.05
IFT140-208ENST00000566818 STAM2O75886 525 aa21.64■■□□□ 1.05
IFT140-208ENST00000566818 HMGB1P09429 215 aaKnown RBP21.64■■□□□ 1.05
IFT140-208ENST00000566818 TGFB3P10600 412 aa21.64■■□□□ 1.05
IFT140-208ENST00000566818 CCL23P55773 120 aa21.64■■□□□ 1.05
IFT140-208ENST00000566818 CHMP4BP1P59074 171 aa21.64■■□□□ 1.05
IFT140-208ENST00000566818 COL9A3Q14050 684 aaPredicted RBP21.64■■□□□ 1.05
IFT140-208ENST00000566818 GNPTABQ3T906 1256 aa21.64■■□□□ 1.05
IFT140-208ENST00000566818 TMTC3Q6ZXV5 915 aa21.64■■□□□ 1.05
IFT140-208ENST00000566818 DHX32Q7L7V1 743 aaKnown RBP21.64■■□□□ 1.05
IFT140-208ENST00000566818 FANCBQ8NB91 859 aa21.64■■□□□ 1.05
IFT140-208ENST00000566818 KATNAL1Q9BW62 490 aa21.64■■□□□ 1.05
IFT140-208ENST00000566818 RBM28Q9NW13 759 aaKnown RBP21.64■■□□□ 1.05
IFT140-208ENST00000566818 STXBP5LQ9Y2K9 1186 aa21.64■■□□□ 1.05
IFT140-208ENST00000566818 TMEM265A0A087WTH1 108 aa21.63■■□□□ 1.05
IFT140-208ENST00000566818 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.63■■□□□ 1.05
IFT140-208ENST00000566818 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.63■■□□□ 1.05
IFT140-208ENST00000566818 RGS20O76081 388 aa21.63■■□□□ 1.05
IFT140-208ENST00000566818 ACRP10323 421 aa21.63■■□□□ 1.05
IFT140-208ENST00000566818 APOA5Q6Q788 366 aa21.63■■□□□ 1.05
IFT140-208ENST00000566818 RAB11FIP4Q86YS3 637 aa21.63■■□□□ 1.05
IFT140-208ENST00000566818 RPUSD2Q8IZ73 545 aaKnown RBP21.63■■□□□ 1.05
IFT140-208ENST00000566818 PIK3CDO00329 1044 aa21.62■■□□□ 1.05
IFT140-208ENST00000566818 GGPS1O95749 300 aa21.62■■□□□ 1.05
IFT140-208ENST00000566818 CYP2C9P11712 490 aa21.62■■□□□ 1.05
IFT140-208ENST00000566818 ZNF365Q70YC5 407 aa21.62■■□□□ 1.05
IFT140-208ENST00000566818 C16orf59Q7L2K0 433 aa21.62■■□□□ 1.05
IFT140-208ENST00000566818 CCDC155Q8N6L0 562 aa21.62■■□□□ 1.05
IFT140-208ENST00000566818 WNT8AQ9H1J5 351 aa21.62■■□□□ 1.05
IFT140-208ENST00000566818 LAMA2P24043 3122 aaKnown RBP21.61■■□□□ 1.05
IFT140-208ENST00000566818 FGBP02675 491 aa21.61■■□□□ 1.05
IFT140-208ENST00000566818 PFKMP08237 780 aa21.61■■□□□ 1.05
IFT140-208ENST00000566818 UBA1P22314 1058 aaKnown RBP21.61■■□□□ 1.05
IFT140-208ENST00000566818 EXOSC10Q01780 885 aaKnown RBP21.61■■□□□ 1.05
IFT140-208ENST00000566818 CELF3Q5SZQ8 465 aaKnown RBP21.61■■□□□ 1.05
IFT140-208ENST00000566818 XRRA1Q6P2D8 792 aa21.61■■□□□ 1.05
IFT140-208ENST00000566818 SESTD1Q86VW0 696 aa21.61■■□□□ 1.05
IFT140-208ENST00000566818 RASEFQ8IZ41 740 aa21.61■■□□□ 1.05
IFT140-208ENST00000566818 CMTR1Q8N1G2 835 aaKnown RBP21.61■■□□□ 1.05
IFT140-208ENST00000566818 FAM161BQ96MY7 647 aa21.61■■□□□ 1.05
IFT140-208ENST00000566818 SPATA33Q96N06 139 aa21.61■■□□□ 1.05
IFT140-208ENST00000566818 PITPNM1O00562 1244 aa21.6■■□□□ 1.05
IFT140-208ENST00000566818 ZBTB43O43298 467 aa21.6■■□□□ 1.05
IFT140-208ENST00000566818 REC8O95072 547 aa21.6■■□□□ 1.05
IFT140-208ENST00000566818 FGD1P98174 961 aa21.6■■□□□ 1.05
IFT140-208ENST00000566818 BFSP2Q13515 415 aa21.6■■□□□ 1.05
IFT140-208ENST00000566818 RTN1Q16799 776 aa21.6■■□□□ 1.05
IFT140-208ENST00000566818 ADCK5Q3MIX3 580 aa21.6■■□□□ 1.05
IFT140-208ENST00000566818 RASIP1Q5U651 963 aa21.6■■□□□ 1.05
IFT140-208ENST00000566818 MYSM1Q5VVJ2 828 aa21.6■■□□□ 1.05
IFT140-208ENST00000566818 USP17L6PQ6QN14 398 aa21.6■■□□□ 1.05
IFT140-208ENST00000566818 CCDC82Q8N4S0 544 aa21.6■■□□□ 1.05
IFT140-208ENST00000566818 RETREG2Q8NC44 543 aa21.6■■□□□ 1.05
IFT140-208ENST00000566818 HERVK_113Q902F9 699 aa21.6■■□□□ 1.05
IFT140-208ENST00000566818 KAT2BQ92831 832 aa21.6■■□□□ 1.05
IFT140-208ENST00000566818 TCEANC2Q96MN5 208 aa21.6■■□□□ 1.05
IFT140-208ENST00000566818 INPP4AQ96PE3 977 aaPredicted RBP21.6■■□□□ 1.05
IFT140-208ENST00000566818 PSTPIP2Q9H939 334 aa21.6■■□□□ 1.05
IFT140-208ENST00000566818 MLXIPQ9HAP2 919 aa21.6■■□□□ 1.05
IFT140-208ENST00000566818 F2P00734 622 aa21.59■■□□□ 1.05
IFT140-208ENST00000566818 ZNF286BP0CG31 522 aa21.59■■□□□ 1.05
IFT140-208ENST00000566818 RFC2P35250 354 aa21.59■■□□□ 1.05
IFT140-208ENST00000566818 PSEN2P49810 448 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms