RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 BICD2Q8TD16 824 aa24.15■■□□□ 1.46
SHCBP1-205ENST00000566016 LENG1Q96BZ8 264 aaPredicted RBP24.15■■□□□ 1.46
SHCBP1-205ENST00000566016 WDR11Q9BZH6 1224 aa24.15■■□□□ 1.46
SHCBP1-205ENST00000566016 EHMT1Q9H9B1 1298 aa24.15■■□□□ 1.46
SHCBP1-205ENST00000566016 MYH7BA7E2Y1 1941 aa24.15■■□□□ 1.46
SHCBP1-205ENST00000566016 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.14■■□□□ 1.46
SHCBP1-205ENST00000566016 NKRFO15226 690 aaKnown RBP eCLIP24.14■■□□□ 1.46
SHCBP1-205ENST00000566016 SMPD1P17405 629 aa24.14■■□□□ 1.46
SHCBP1-205ENST00000566016 CST5P28325 142 aaPredicted RBP24.14■■□□□ 1.46
SHCBP1-205ENST00000566016 GJA9P57773 515 aa24.14■■□□□ 1.46
SHCBP1-205ENST00000566016 RNF180Q86T96 592 aa24.14■■□□□ 1.46
SHCBP1-205ENST00000566016 WASF1Q92558 559 aa24.14■■□□□ 1.46
SHCBP1-205ENST00000566016 VPS54Q9P1Q0 977 aa24.14■■□□□ 1.46
SHCBP1-205ENST00000566016 TTLL4Q14679 1199 aa24.13■■□□□ 1.45
SHCBP1-205ENST00000566016 LRRC41Q15345 812 aa24.13■■□□□ 1.45
SHCBP1-205ENST00000566016 REXO1Q8N1G1 1221 aaKnown RBP24.13■■□□□ 1.45
SHCBP1-205ENST00000566016 INPP4AQ96PE3 977 aaPredicted RBP24.13■■□□□ 1.45
SHCBP1-205ENST00000566016 LLPHQ9BRT6 129 aaKnown RBP24.13■■□□□ 1.45
SHCBP1-205ENST00000566016 SPC25Q9HBM1 224 aa24.13■■□□□ 1.45
SHCBP1-205ENST00000566016 ORC3Q9UBD5 711 aaPredicted RBP24.13■■□□□ 1.45
SHCBP1-205ENST00000566016 PCDHA6Q9UN73 950 aa24.13■■□□□ 1.45
SHCBP1-205ENST00000566016 PCDHA8Q9Y5H6 950 aa24.13■■□□□ 1.45
SHCBP1-205ENST00000566016 RGS20O76081 388 aa24.13■■□□□ 1.45
SHCBP1-205ENST00000566016 COL6A1P12109 1028 aa24.13■■□□□ 1.45
SHCBP1-205ENST00000566016 GALNT17Q6IS24 598 aa24.13■■□□□ 1.45
SHCBP1-205ENST00000566016 CCDC62Q6P9F0 684 aa24.13■■□□□ 1.45
SHCBP1-205ENST00000566016 KCNV1Q6PIU1 500 aa24.13■■□□□ 1.45
SHCBP1-205ENST00000566016 NECAB2Q7Z6G3 386 aa24.13■■□□□ 1.45
SHCBP1-205ENST00000566016 TLK2Q86UE8 772 aa24.13■■□□□ 1.45
SHCBP1-205ENST00000566016 KBTBD13C9JR72 458 aa24.12■■□□□ 1.45
SHCBP1-205ENST00000566016 PGK1P00558 417 aa24.12■■□□□ 1.45
SHCBP1-205ENST00000566016 MYCLP12524 364 aaPredicted RBP24.12■■□□□ 1.45
SHCBP1-205ENST00000566016 XBP1P17861 261 aa24.12■■□□□ 1.45
SHCBP1-205ENST00000566016 MRPS9P82933 396 aaKnown RBP24.12■■□□□ 1.45
SHCBP1-205ENST00000566016 KLHDC9Q8NEP7 349 aa24.12■■□□□ 1.45
SHCBP1-205ENST00000566016 ANO3Q9BYT9 981 aa24.12■■□□□ 1.45
SHCBP1-205ENST00000566016 ALPK3Q96L96 1907 aa24.11■■□□□ 1.45
SHCBP1-205ENST00000566016 CEP290O15078 2479 aa24.11■■□□□ 1.45
SHCBP1-205ENST00000566016 TGFB3P10600 412 aa24.11■■□□□ 1.45
SHCBP1-205ENST00000566016 FDPSP14324 419 aaKnown RBP24.11■■□□□ 1.45
SHCBP1-205ENST00000566016 SREBF1P36956 1147 aa24.11■■□□□ 1.45
SHCBP1-205ENST00000566016 GNPTABQ3T906 1256 aa24.11■■□□□ 1.45
SHCBP1-205ENST00000566016 DAGLBQ8NCG7 672 aa24.11■■□□□ 1.45
SHCBP1-205ENST00000566016 DIS3LQ8TF46 1054 aaKnown RBP24.11■■□□□ 1.45
SHCBP1-205ENST00000566016 PAWRQ96IZ0 340 aaKnown RBP24.11■■□□□ 1.45
SHCBP1-205ENST00000566016 AIFM3Q96NN9 605 aa24.11■■□□□ 1.45
SHCBP1-205ENST00000566016 TSEN34Q9BSV6 310 aaKnown RBP24.11■■□□□ 1.45
SHCBP1-205ENST00000566016 TXNP10599 105 aaKnown RBP24.1■■□□□ 1.45
SHCBP1-205ENST00000566016 NLRP5P59047 1200 aa24.1■■□□□ 1.45
SHCBP1-205ENST00000566016 GJC2Q5T442 439 aaPredicted RBP24.1■■□□□ 1.45
SHCBP1-205ENST00000566016 SEPT14Q6ZU15 432 aa24.1■■□□□ 1.45
SHCBP1-205ENST00000566016 CCDC83Q8IWF9 413 aa24.1■■□□□ 1.45
SHCBP1-205ENST00000566016 AP5M1Q9H0R1 490 aa24.1■■□□□ 1.45
SHCBP1-205ENST00000566016 C11orf49Q9H6J7 331 aa24.1■■□□□ 1.45
SHCBP1-205ENST00000566016 CTAGE5O15320 804 aa24.09■■□□□ 1.45
SHCBP1-205ENST00000566016 ARIH2O95376 493 aa24.09■■□□□ 1.45
SHCBP1-205ENST00000566016 CD2BP2O95400 341 aaKnown RBP24.09■■□□□ 1.45
SHCBP1-205ENST00000566016 C6orf222P0C671 652 aaPredicted RBP24.09■■□□□ 1.45
SHCBP1-205ENST00000566016 ICAM3P32942 547 aa24.09■■□□□ 1.45
SHCBP1-205ENST00000566016 MLLT1Q03111 559 aaPredicted RBP24.09■■□□□ 1.45
SHCBP1-205ENST00000566016 CCSAPQ6IQ19 270 aaPredicted RBP24.09■■□□□ 1.45
SHCBP1-205ENST00000566016 PCSK9Q8NBP7 692 aaKnown RBP24.09■■□□□ 1.45
SHCBP1-205ENST00000566016 PCDHA4Q9UN74 947 aa24.09■■□□□ 1.45
SHCBP1-205ENST00000566016 PHF24Q9UPV7 400 aa24.09■■□□□ 1.45
SHCBP1-205ENST00000566016 MRVI1Q9Y6F6 885 aa24.09■■□□□ 1.45
SHCBP1-205ENST00000566016 MOXD2PA6NHM9 499 aa24.08■■□□□ 1.45
SHCBP1-205ENST00000566016 JAK2O60674 1132 aa24.08■■□□□ 1.45
SHCBP1-205ENST00000566016 NPY5RQ15761 445 aa24.08■■□□□ 1.45
SHCBP1-205ENST00000566016 TMEM63BQ5T3F8 832 aa24.08■■□□□ 1.45
SHCBP1-205ENST00000566016 PHF20Q9BVI0 1012 aa24.08■■□□□ 1.45
SHCBP1-205ENST00000566016 DDX41Q9UJV9 622 aaKnown RBP24.08■■□□□ 1.45
SHCBP1-205ENST00000566016 FIBPO43427 364 aa24.07■■□□□ 1.44
SHCBP1-205ENST00000566016 HMGN5P82970 282 aaKnown RBP24.07■■□□□ 1.44
SHCBP1-205ENST00000566016 CRYGNQ8WXF5 182 aa24.07■■□□□ 1.44
SHCBP1-205ENST00000566016 EMID1Q96A84 441 aaPredicted RBP24.07■■□□□ 1.44
SHCBP1-205ENST00000566016 GPRASP2Q96D09 838 aa24.07■■□□□ 1.44
SHCBP1-205ENST00000566016 TMX3Q96JJ7 454 aa24.07■■□□□ 1.44
SHCBP1-205ENST00000566016 ALG1Q9BT22 464 aa24.07■■□□□ 1.44
SHCBP1-205ENST00000566016 TMEM260Q9NX78 707 aa24.07■■□□□ 1.44
SHCBP1-205ENST00000566016 MYADML2A6NDP7 307 aa24.07■■□□□ 1.44
SHCBP1-205ENST00000566016 M0R2N6 131 aa24.07■■□□□ 1.44
SHCBP1-205ENST00000566016 DYNC1LI2O43237 492 aaPredicted RBP24.07■■□□□ 1.44
SHCBP1-205ENST00000566016 FSCN1Q16658 493 aaKnown RBP24.07■■□□□ 1.44
SHCBP1-205ENST00000566016 GNASQ5JWF2 1037 aa24.07■■□□□ 1.44
SHCBP1-205ENST00000566016 JAKMIP3Q5VZ66 844 aa24.07■■□□□ 1.44
SHCBP1-205ENST00000566016 BLIDQ8IZY5 108 aa24.07■■□□□ 1.44
SHCBP1-205ENST00000566016 CDHR1Q96JP9 859 aa24.07■■□□□ 1.44
SHCBP1-205ENST00000566016 HTATIP2Q9BUP3 242 aa24.07■■□□□ 1.44
SHCBP1-205ENST00000566016 UBIAD1Q9Y5Z9 338 aa24.07■■□□□ 1.44
SHCBP1-205ENST00000566016 DOCK5Q9H7D0 1870 aa24.06■■□□□ 1.44
SHCBP1-205ENST00000566016 ADAMTS3O15072 1205 aa24.06■■□□□ 1.44
SHCBP1-205ENST00000566016 GH1P01241 217 aa24.06■■□□□ 1.44
SHCBP1-205ENST00000566016 CPT1AP50416 773 aa24.06■■□□□ 1.44
SHCBP1-205ENST00000566016 ARHGAP4P98171 946 aa24.06■■□□□ 1.44
SHCBP1-205ENST00000566016 NLRX1Q86UT6 975 aa24.06■■□□□ 1.44
SHCBP1-205ENST00000566016 OR6J1Q8NGC5 347 aa24.06■■□□□ 1.44
SHCBP1-205ENST00000566016 PGBD1Q96JS3 809 aa24.06■■□□□ 1.44
SHCBP1-205ENST00000566016 SCN10AQ9Y5Y9 1956 aa24.05■■□□□ 1.44
SHCBP1-205ENST00000566016 SPATA31C2B4DYI2 1134 aa24.05■■□□□ 1.44
SHCBP1-205ENST00000566016 MAFGO15525 162 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms