RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 PXMP2Q9NR77 195 aa10.01□□□□□ -0.81
CAPN3-213ENST00000565173 ZBBXA8MT70 800 aa10□□□□□ -0.81
CAPN3-213ENST00000565173 KLRF2D3W0D1 207 aa10□□□□□ -0.81
CAPN3-213ENST00000565173 RBAK-RBAKDNI3L0D1 243 aa10□□□□□ -0.81
CAPN3-213ENST00000565173 RGS20O76081 388 aa10□□□□□ -0.81
CAPN3-213ENST00000565173 CFBP00751 764 aa10□□□□□ -0.81
CAPN3-213ENST00000565173 NR3C2P08235 984 aa10□□□□□ -0.81
CAPN3-213ENST00000565173 EIF2AK2P19525 551 aaKnown RBP10□□□□□ -0.81
CAPN3-213ENST00000565173 IGFBP4P22692 258 aa10□□□□□ -0.81
CAPN3-213ENST00000565173 PTH1RQ03431 593 aa10□□□□□ -0.81
CAPN3-213ENST00000565173 BFSP2Q13515 415 aa10□□□□□ -0.81
CAPN3-213ENST00000565173 CCDC85BQ15834 202 aaPredicted RBP10□□□□□ -0.81
CAPN3-213ENST00000565173 PTGISQ16647 500 aa10□□□□□ -0.81
CAPN3-213ENST00000565173 ARHGEF16Q5VV41 709 aa10□□□□□ -0.81
CAPN3-213ENST00000565173 CHST3Q7LGC8 479 aa10□□□□□ -0.81
CAPN3-213ENST00000565173 PHOSPHO2Q8TCD6 241 aa10□□□□□ -0.81
CAPN3-213ENST00000565173 ATXN2LQ8WWM7 1075 aaKnown RBP10□□□□□ -0.81
CAPN3-213ENST00000565173 DHX38Q92620 1227 aaKnown RBP10□□□□□ -0.81
CAPN3-213ENST00000565173 UBAC1Q9BSL1 405 aa10□□□□□ -0.81
CAPN3-213ENST00000565173 AMNQ9BXJ7 453 aa10□□□□□ -0.81
CAPN3-213ENST00000565173 SENP2Q9HC62 589 aa10□□□□□ -0.81
CAPN3-213ENST00000565173 TAF6LQ9Y6J9 622 aa10□□□□□ -0.81
CAPN3-213ENST00000565173 BDP1A6H8Y1 2624 aa10□□□□□ -0.81
CAPN3-213ENST00000565173 KIAA1217Q5T5P2 1943 aa9.99□□□□□ -0.81
CAPN3-213ENST00000565173 HAS3O00219 553 aa9.99□□□□□ -0.81
CAPN3-213ENST00000565173 ZBTB5O15062 677 aa9.99□□□□□ -0.81
CAPN3-213ENST00000565173 CYTH3O43739 400 aa9.99□□□□□ -0.81
CAPN3-213ENST00000565173 DHX16O60231 1041 aaKnown RBP9.99□□□□□ -0.81
CAPN3-213ENST00000565173 ARHGEF15O94989 841 aa9.99□□□□□ -0.81
CAPN3-213ENST00000565173 CA3P07451 260 aa9.99□□□□□ -0.81
CAPN3-213ENST00000565173 CYP21A2P08686 494 aa9.99□□□□□ -0.81
CAPN3-213ENST00000565173 HOXD8P13378 290 aaPredicted RBP9.99□□□□□ -0.81
CAPN3-213ENST00000565173 POU3F3P20264 500 aaPredicted RBP9.99□□□□□ -0.81
CAPN3-213ENST00000565173 CASTP20810 708 aaKnown RBP9.99□□□□□ -0.81
CAPN3-213ENST00000565173 SP2Q02086 613 aa9.99□□□□□ -0.81
CAPN3-213ENST00000565173 RBL2Q08999 1139 aa9.99□□□□□ -0.81
CAPN3-213ENST00000565173 LAMC2Q13753 1193 aa9.99□□□□□ -0.81
CAPN3-213ENST00000565173 DGKDQ16760 1214 aa9.99□□□□□ -0.81
CAPN3-213ENST00000565173 TMEM67Q5HYA8 995 aa9.99□□□□□ -0.81
CAPN3-213ENST00000565173 TTC22Q5TAA0 569 aa9.99□□□□□ -0.81
CAPN3-213ENST00000565173 PPP2R2DQ66LE6 453 aa9.99□□□□□ -0.81
CAPN3-213ENST00000565173 VSIG10LQ86VR7 867 aa9.99□□□□□ -0.81
CAPN3-213ENST00000565173 RETREG2Q8NC44 543 aa9.99□□□□□ -0.81
CAPN3-213ENST00000565173 ASB2Q96Q27 587 aa9.99□□□□□ -0.81
CAPN3-213ENST00000565173 PDCD2LQ9BRP1 358 aa9.99□□□□□ -0.81
CAPN3-213ENST00000565173 RIOX1Q9H6W3 641 aa9.99□□□□□ -0.81
CAPN3-213ENST00000565173 MAP3K20Q9NYL2 800 aaKnown RBP9.99□□□□□ -0.81
CAPN3-213ENST00000565173 GTF2IRD1Q9UHL9 959 aa9.99□□□□□ -0.81
CAPN3-213ENST00000565173 MYO9BQ13459 2157 aa9.99□□□□□ -0.81
CAPN3-213ENST00000565173 TET1Q8NFU7 2136 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 EPOPA6NHQ4 379 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 RFXAPO00287 272 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 F2P00734 622 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 CKBP12277 381 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 ACTN1P12814 892 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 CHMLP26374 656 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 HOXA13P31271 388 aaPredicted RBP9.98□□□□□ -0.81
CAPN3-213ENST00000565173 PSEN2P49810 448 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 CHMP4BP1P59074 171 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 TROAPQ12815 778 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 HIC1Q14526 733 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 GRM4Q14833 912 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 TCTN1Q2MV58 587 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 MYSM1Q5VVJ2 828 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 TRAF7Q6Q0C0 670 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 HERC6Q8IVU3 1022 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 SAMD3Q8N6K7 520 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 IL31RAQ8NI17 732 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 PPTC7Q8NI37 304 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 CAGE1Q8TC20 777 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 AFAP1L1Q8TED9 768 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 SLC9A7Q96T83 725 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 FTOQ9C0B1 505 aaKnown RBP eCLIP9.98□□□□□ -0.81
CAPN3-213ENST00000565173 THEGQ9P2T0 379 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 HDAC6Q9UBN7 1215 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 NOD1Q9Y239 953 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 PCDHA1Q9Y5I3 950 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 MRVI1Q9Y6F6 885 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 TANC1Q9C0D5 1861 aa9.98□□□□□ -0.81
CAPN3-213ENST00000565173 TRIP12Q14669 1992 aaPredicted RBP9.97□□□□□ -0.81
CAPN3-213ENST00000565173 E7EWF7 191 aa9.97□□□□□ -0.81
CAPN3-213ENST00000565173 NBNO60934 754 aa9.97□□□□□ -0.81
CAPN3-213ENST00000565173 PPFIA4O75335 1185 aa9.97□□□□□ -0.81
CAPN3-213ENST00000565173 BAIAP3O94812 1187 aa9.97□□□□□ -0.81
CAPN3-213ENST00000565173 CXCL10P02778 98 aa9.97□□□□□ -0.81
CAPN3-213ENST00000565173 MYCLP12524 364 aaPredicted RBP9.97□□□□□ -0.81
CAPN3-213ENST00000565173 SELPP16109 830 aa9.97□□□□□ -0.81
CAPN3-213ENST00000565173 MRPS5P82675 430 aaKnown RBP9.97□□□□□ -0.81
CAPN3-213ENST00000565173 ZNF200P98182 395 aaPredicted RBP9.97□□□□□ -0.81
CAPN3-213ENST00000565173 TAP1Q03518 808 aa9.97□□□□□ -0.81
CAPN3-213ENST00000565173 MFSD10Q14728 455 aa9.97□□□□□ -0.81
CAPN3-213ENST00000565173 PGM5Q15124 567 aa9.97□□□□□ -0.81
CAPN3-213ENST00000565173 KIAA0753Q2KHM9 967 aa9.97□□□□□ -0.81
CAPN3-213ENST00000565173 TRIM71Q2Q1W2 868 aaKnown RBP9.97□□□□□ -0.81
CAPN3-213ENST00000565173 HSDL1Q3SXM5 330 aa9.97□□□□□ -0.81
CAPN3-213ENST00000565173 CELF3Q5SZQ8 465 aaKnown RBP9.97□□□□□ -0.81
CAPN3-213ENST00000565173 SPRED2Q7Z698 418 aa9.97□□□□□ -0.81
CAPN3-213ENST00000565173 DHX37Q8IY37 1157 aaKnown RBP9.97□□□□□ -0.81
CAPN3-213ENST00000565173 IGDCC4Q8TDY8 1250 aa9.97□□□□□ -0.81
CAPN3-213ENST00000565173 GPKOWQ92917 476 aaPredicted RBP eCLIP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms