RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 RETREG2Q8NC44 543 aa22.63■■□□□ 1.21
MAP1LC3B-206ENST00000564844 GOLGA6L7A0A1B0GV03 622 aa22.62■■□□□ 1.21
MAP1LC3B-206ENST00000564844 DDAH1O94760 285 aa22.62■■□□□ 1.21
MAP1LC3B-206ENST00000564844 RCAN1P53805 252 aa22.62■■□□□ 1.21
MAP1LC3B-206ENST00000564844 CCDC40Q4G0X9 1142 aa22.62■■□□□ 1.21
MAP1LC3B-206ENST00000564844 SIK3Q9Y2K2 1263 aa22.62■■□□□ 1.21
MAP1LC3B-206ENST00000564844 KCNK3O14649 394 aa22.62■■□□□ 1.21
MAP1LC3B-206ENST00000564844 PRDX5P30044 214 aa22.62■■□□□ 1.21
MAP1LC3B-206ENST00000564844 MDH1P40925 334 aaKnown RBP22.62■■□□□ 1.21
MAP1LC3B-206ENST00000564844 RAPGEF1Q13905 1077 aa22.62■■□□□ 1.21
MAP1LC3B-206ENST00000564844 SLC35G1Q2M3R5 365 aa22.62■■□□□ 1.21
MAP1LC3B-206ENST00000564844 FAM114A1Q8IWE2 563 aa22.62■■□□□ 1.21
MAP1LC3B-206ENST00000564844 GIMAP7Q8NHV1 300 aa22.62■■□□□ 1.21
MAP1LC3B-206ENST00000564844 ERGIC2Q96RQ1 377 aa22.62■■□□□ 1.21
MAP1LC3B-206ENST00000564844 LRRC4CQ9HCJ2 640 aa22.62■■□□□ 1.21
MAP1LC3B-206ENST00000564844 KLC4Q9NSK0 619 aa22.62■■□□□ 1.21
MAP1LC3B-206ENST00000564844 BIN2Q9UBW5 565 aaPredicted RBP22.62■■□□□ 1.21
MAP1LC3B-206ENST00000564844 DCDC2CA8MYV0 355 aa22.61■■□□□ 1.21
MAP1LC3B-206ENST00000564844 SCP2P22307 547 aa22.61■■□□□ 1.21
MAP1LC3B-206ENST00000564844 CALML3P27482 149 aa22.61■■□□□ 1.21
MAP1LC3B-206ENST00000564844 PAK2Q13177 524 aa22.61■■□□□ 1.21
MAP1LC3B-206ENST00000564844 NELFCDQ8IXH7 590 aa22.61■■□□□ 1.21
MAP1LC3B-206ENST00000564844 UBLCP1Q8WVY7 318 aaPredicted RBP22.61■■□□□ 1.21
MAP1LC3B-206ENST00000564844 ZKSCAN4Q969J2 545 aaPredicted RBP22.61■■□□□ 1.21
MAP1LC3B-206ENST00000564844 KCNG1Q9UIX4 513 aa22.61■■□□□ 1.21
MAP1LC3B-206ENST00000564844 KIAA0753Q2KHM9 967 aa22.61■■□□□ 1.21
MAP1LC3B-206ENST00000564844 RCSD1Q6JBY9 416 aa22.61■■□□□ 1.21
MAP1LC3B-206ENST00000564844 CAMTA1Q9Y6Y1 1673 aa22.61■■□□□ 1.21
MAP1LC3B-206ENST00000564844 CYTH3O43739 400 aa22.61■■□□□ 1.21
MAP1LC3B-206ENST00000564844 ATP6V1G3Q96LB4 118 aa22.61■■□□□ 1.21
MAP1LC3B-206ENST00000564844 DCP1AQ9NPI6 582 aaPredicted RBP22.61■■□□□ 1.21
MAP1LC3B-206ENST00000564844 HAUS2Q9NVX0 235 aa22.61■■□□□ 1.21
MAP1LC3B-206ENST00000564844 OPLAHO14841 1288 aa22.6■■□□□ 1.21
MAP1LC3B-206ENST00000564844 FLT3P36888 993 aa22.6■■□□□ 1.21
MAP1LC3B-206ENST00000564844 ADAT2Q7Z6V5 191 aaKnown RBP22.6■■□□□ 1.21
MAP1LC3B-206ENST00000564844 ANAPC4Q9UJX5 808 aa22.6■■□□□ 1.21
MAP1LC3B-206ENST00000564844 GOLGA6L10A6NI86 522 aa22.6■■□□□ 1.21
MAP1LC3B-206ENST00000564844 RPSAP08865 295 aaKnown RBP22.6■■□□□ 1.21
MAP1LC3B-206ENST00000564844 CAVIN3Q969G5 261 aa22.6■■□□□ 1.21
MAP1LC3B-206ENST00000564844 MYMKA6NI61 221 aa22.59■■□□□ 1.21
MAP1LC3B-206ENST00000564844 SMIM23A6NLE4 172 aa22.59■■□□□ 1.21
MAP1LC3B-206ENST00000564844 KDM7AQ6ZMT4 941 aa22.59■■□□□ 1.21
MAP1LC3B-206ENST00000564844 CCDC121Q6ZUS5 278 aa22.59■■□□□ 1.21
MAP1LC3B-206ENST00000564844 FAM133AQ8N9E0 248 aa22.59■■□□□ 1.21
MAP1LC3B-206ENST00000564844 SLC40A1Q9NP59 571 aa22.59■■□□□ 1.21
MAP1LC3B-206ENST00000564844 TMEM260Q9NX78 707 aa22.59■■□□□ 1.21
MAP1LC3B-206ENST00000564844 POTEMA6NI47 508 aa22.59■■□□□ 1.21
MAP1LC3B-206ENST00000564844 PHF20L1A8MW92 1017 aa22.59■■□□□ 1.21
MAP1LC3B-206ENST00000564844 CEP104O60308 925 aa22.59■■□□□ 1.21
MAP1LC3B-206ENST00000564844 CCDC172P0C7W6 258 aa22.59■■□□□ 1.21
MAP1LC3B-206ENST00000564844 EPB41P11171 864 aaKnown RBP22.59■■□□□ 1.21
MAP1LC3B-206ENST00000564844 CDR1P51861 262 aa22.59■■□□□ 1.21
MAP1LC3B-206ENST00000564844 NAPAP54920 295 aa22.59■■□□□ 1.21
MAP1LC3B-206ENST00000564844 ZNF662Q6ZS27 426 aa22.59■■□□□ 1.21
MAP1LC3B-206ENST00000564844 DDX47Q9H0S4 455 aaKnown RBP22.59■■□□□ 1.21
MAP1LC3B-206ENST00000564844 ZHX3Q9H4I2 956 aa22.59■■□□□ 1.21
MAP1LC3B-206ENST00000564844 SUFUQ9UMX1 484 aa22.59■■□□□ 1.21
MAP1LC3B-206ENST00000564844 KIF5BP33176 963 aa22.59■■□□□ 1.21
MAP1LC3B-206ENST00000564844 GSCP56915 257 aaPredicted RBP22.59■■□□□ 1.21
MAP1LC3B-206ENST00000564844 MECOMQ03112 1051 aa22.59■■□□□ 1.21
MAP1LC3B-206ENST00000564844 MDM1Q8TC05 714 aa22.59■■□□□ 1.21
MAP1LC3B-206ENST00000564844 CYFIP2Q96F07 1278 aa22.59■■□□□ 1.21
MAP1LC3B-206ENST00000564844 A0A087X0T9 212 aa22.58■■□□□ 1.21
MAP1LC3B-206ENST00000564844 TMCO5BA8MYB1 307 aa22.58■■□□□ 1.21
MAP1LC3B-206ENST00000564844 TRAF5O00463 557 aa22.58■■□□□ 1.21
MAP1LC3B-206ENST00000564844 FAM228BP0C875 321 aa22.58■■□□□ 1.21
MAP1LC3B-206ENST00000564844 CTNNA1P35221 906 aaKnown RBP22.58■■□□□ 1.21
MAP1LC3B-206ENST00000564844 CCDC152Q4G0S7 254 aa22.58■■□□□ 1.21
MAP1LC3B-206ENST00000564844 BAP1Q92560 729 aa22.58■■□□□ 1.21
MAP1LC3B-206ENST00000564844 NUDT12Q9BQG2 462 aa22.58■■□□□ 1.21
MAP1LC3B-206ENST00000564844 IL17RBQ9NRM6 502 aa22.58■■□□□ 1.21
MAP1LC3B-206ENST00000564844 TLR2O60603 784 aa22.58■■□□□ 1.2
MAP1LC3B-206ENST00000564844 C3orf67Q6ZVT6 689 aa22.58■■□□□ 1.2
MAP1LC3B-206ENST00000564844 CADPS2Q86UW7 1296 aa22.58■■□□□ 1.2
MAP1LC3B-206ENST00000564844 N4BP2L2Q92802 583 aaPredicted RBP22.58■■□□□ 1.2
MAP1LC3B-206ENST00000564844 LSM14BQ9BX40 385 aaKnown RBP22.58■■□□□ 1.2
MAP1LC3B-206ENST00000564844 MKNK2Q9HBH9 465 aa22.58■■□□□ 1.2
MAP1LC3B-206ENST00000564844 NOVA2Q9UNW9 492 aaKnown RBP22.58■■□□□ 1.2
MAP1LC3B-206ENST00000564844 DNM1LO00429 736 aa22.57■■□□□ 1.2
MAP1LC3B-206ENST00000564844 OR52Z1P0C646 297 aa22.57■■□□□ 1.2
MAP1LC3B-206ENST00000564844 MICALCLQ6ZW33 695 aa22.57■■□□□ 1.2
MAP1LC3B-206ENST00000564844 TBC1D31Q96DN5 1066 aa22.57■■□□□ 1.2
MAP1LC3B-206ENST00000564844 MTA3Q9BTC8 594 aa22.57■■□□□ 1.2
MAP1LC3B-206ENST00000564844 NEUROG2Q9H2A3 272 aa22.57■■□□□ 1.2
MAP1LC3B-206ENST00000564844 DPH5Q9H2P9 285 aa22.57■■□□□ 1.2
MAP1LC3B-206ENST00000564844 GDF3Q9NR23 364 aa22.57■■□□□ 1.2
MAP1LC3B-206ENST00000564844 ERVK-9P63128 1117 aa22.57■■□□□ 1.2
MAP1LC3B-206ENST00000564844 KCNMA1Q12791 1236 aa22.57■■□□□ 1.2
MAP1LC3B-206ENST00000564844 BRINP3Q76B58 766 aa22.57■■□□□ 1.2
MAP1LC3B-206ENST00000564844 ZSCAN29Q8IWY8 852 aaPredicted RBP22.57■■□□□ 1.2
MAP1LC3B-206ENST00000564844 CDK5RAP3Q96JB5 506 aa22.57■■□□□ 1.2
MAP1LC3B-206ENST00000564844 CCSER1Q9C0I3 900 aa22.57■■□□□ 1.2
MAP1LC3B-206ENST00000564844 SAP30BPQ9UHR5 308 aaKnown RBP22.57■■□□□ 1.2
MAP1LC3B-206ENST00000564844 FLT1P17948 1338 aa22.57■■□□□ 1.2
MAP1LC3B-206ENST00000564844 PDE6BP35913 854 aa22.56■■□□□ 1.2
MAP1LC3B-206ENST00000564844 ITGB3BPQ13352 177 aaPredicted RBP22.56■■□□□ 1.2
MAP1LC3B-206ENST00000564844 NKX1-1Q15270 411 aaPredicted RBP22.56■■□□□ 1.2
MAP1LC3B-206ENST00000564844 UBA5Q9GZZ9 404 aa22.56■■□□□ 1.2
MAP1LC3B-206ENST00000564844 FSBPO95073 299 aa22.56■■□□□ 1.2
MAP1LC3B-206ENST00000564844 HSD17B3P37058 310 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms