RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 SELENOOQ9BVL4 669 aa17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 RIOX1Q9H6W3 641 aa17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 TRIM66O15016 1216 aa17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 AKR1B10O60218 316 aa17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 CXCR5P32302 372 aa17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 GGCXP38435 758 aa17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 RHBDL3P58872 404 aa17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 GUF1Q8N442 669 aaKnown RBP17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 ANKRD13CQ8N6S4 541 aa17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 STK17AQ9UEE5 414 aa17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 SALL4Q9UJQ4 1053 aa17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 RRP15Q9Y3B9 282 aaKnown RBP17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 TNRC6CQ9HCJ0 1690 aaKnown RBP17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 COL24A1Q17RW2 1714 aa17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 DDX60LQ5H9U9 1706 aaKnown RBP17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 PDHBP11177 359 aa17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 SMARCA1P28370 1054 aa17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 FXR2P51116 673 aaKnown RBP eCLIP17.17■□□□□ 0.345e-8■■■■□ 21.4
GTF3C1-205ENST00000564747 FNBP4Q8N3X1 1017 aaPredicted RBP17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 DDX12PQ92771 950 aa17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 SMARCAL1Q9NZC9 954 aa17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 ESYT2A0FGR8 921 aa17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 EIF6P56537 245 aaKnown RBP17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 NFRKBQ6P4R8 1299 aa17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 CCDC84Q86UT8 332 aaPredicted RBP17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 SNX29Q8TEQ0 813 aa17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 RAD54LQ92698 747 aa17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 GJA10Q969M2 543 aa17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 LRRC1Q9BTT6 524 aa17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 DMGDHQ9UI17 866 aaKnown RBP17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 CCNL1Q9UK58 526 aaPredicted RBP17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 ZNF831Q5JPB2 1677 aa17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 AGPSO00116 658 aa17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 UFL1O94874 794 aa17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 MATR3P43243 847 aaKnown RBP eCLIP17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 ECM1Q16610 540 aa17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 TMEM266Q2M3C6 531 aa17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 FAM182BQ5T319 152 aa17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 LRRC31Q6UY01 552 aa17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 LRRC55Q6ZSA7 311 aa17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 BAP1Q92560 729 aa17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 IQCDQ96DY2 449 aa17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 EHD2Q9NZN4 543 aa17.17■□□□□ 0.34
GTF3C1-205ENST00000564747 LCA5LO95447 670 aa17.16■□□□□ 0.34
GTF3C1-205ENST00000564747 ADCY7P51828 1080 aa17.16■□□□□ 0.34
GTF3C1-205ENST00000564747 ORC2Q13416 577 aaPredicted RBP17.16■□□□□ 0.34
GTF3C1-205ENST00000564747 CLEC10AQ8IUN9 316 aa17.16■□□□□ 0.34
GTF3C1-205ENST00000564747 LRRC47Q8N1G4 583 aaKnown RBP17.16■□□□□ 0.34
GTF3C1-205ENST00000564747 AFAP1L1Q8TED9 768 aa17.16■□□□□ 0.34
GTF3C1-205ENST00000564747 CRACR2AQ9BSW2 395 aa17.16■□□□□ 0.34
GTF3C1-205ENST00000564747 RPS6KA5O75582 802 aa17.16■□□□□ 0.34
GTF3C1-205ENST00000564747 MAGEA1P43355 309 aa17.16■□□□□ 0.34
GTF3C1-205ENST00000564747 GFPT1Q06210 699 aaPredicted RBP17.16■□□□□ 0.34
GTF3C1-205ENST00000564747 IQCEQ6IPM2 695 aa17.16■□□□□ 0.34
GTF3C1-205ENST00000564747 SPATA4Q8NEY3 305 aa17.16■□□□□ 0.34
GTF3C1-205ENST00000564747 OSBPL9Q96SU4 736 aa17.16■□□□□ 0.34
GTF3C1-205ENST00000564747 TANGO6Q9C0B7 1094 aa17.16■□□□□ 0.34
GTF3C1-205ENST00000564747 GPCPD1Q9NPB8 672 aa17.16■□□□□ 0.34
GTF3C1-205ENST00000564747 RSPH14Q9UHP6 348 aa17.16■□□□□ 0.34
GTF3C1-205ENST00000564747 CDK5RAP2Q96SN8 1893 aa17.16■□□□□ 0.34
GTF3C1-205ENST00000564747 NCK2O43639 380 aa17.15■□□□□ 0.34
GTF3C1-205ENST00000564747 RFC4P35249 363 aa17.15■□□□□ 0.34
GTF3C1-205ENST00000564747 NOVP48745 357 aa17.15■□□□□ 0.34
GTF3C1-205ENST00000564747 SLC7A5Q01650 507 aa17.15■□□□□ 0.34
GTF3C1-205ENST00000564747 LRRC63Q05C16 580 aa17.15■□□□□ 0.34
GTF3C1-205ENST00000564747 PDIA5Q14554 519 aa17.15■□□□□ 0.34
GTF3C1-205ENST00000564747 MFSD14BQ5SR56 506 aa17.15■□□□□ 0.34
GTF3C1-205ENST00000564747 KRT79Q5XKE5 535 aa17.15■□□□□ 0.34
GTF3C1-205ENST00000564747 MMGT1Q8N4V1 131 aa17.15■□□□□ 0.34
GTF3C1-205ENST00000564747 FGFR1OPO95684 399 aaKnown RBP17.15■□□□□ 0.34
GTF3C1-205ENST00000564747 TNNI2P48788 182 aa17.15■□□□□ 0.34
GTF3C1-205ENST00000564747 RASSF7Q02833 373 aa17.15■□□□□ 0.34
GTF3C1-205ENST00000564747 UBE2SQ16763 222 aa17.15■□□□□ 0.34
GTF3C1-205ENST00000564747 GOLGA6L1Q8N7Z2 621 aa17.15■□□□□ 0.34
GTF3C1-205ENST00000564747 CNBD1Q8NA66 436 aa17.15■□□□□ 0.34
GTF3C1-205ENST00000564747 EHHADHQ08426 723 aa17.14■□□□□ 0.33
GTF3C1-205ENST00000564747 KCNMA1Q12791 1236 aa17.14■□□□□ 0.33
GTF3C1-205ENST00000564747 CACNA2D4Q7Z3S7 1137 aa17.14■□□□□ 0.33
GTF3C1-205ENST00000564747 AENQ8WTP8 325 aaKnown RBP17.14■□□□□ 0.33
GTF3C1-205ENST00000564747 UIMC1Q96RL1 719 aa17.14■□□□□ 0.33
GTF3C1-205ENST00000564747 RAB34Q9BZG1 259 aa17.14■□□□□ 0.33
GTF3C1-205ENST00000564747 NLRC4Q9NPP4 1024 aa17.14■□□□□ 0.33
GTF3C1-205ENST00000564747 MTMR4Q9NYA4 1195 aa17.14■□□□□ 0.33
GTF3C1-205ENST00000564747 PRLRP16471 622 aa17.14■□□□□ 0.33
GTF3C1-205ENST00000564747 PLCG2P16885 1265 aa17.14■□□□□ 0.33
GTF3C1-205ENST00000564747 CCDC70Q6NSX1 233 aa17.14■□□□□ 0.33
GTF3C1-205ENST00000564747 C15orf52Q6ZUT6 534 aaKnown RBP17.14■□□□□ 0.33
GTF3C1-205ENST00000564747 CERS3Q8IU89 383 aa17.14■□□□□ 0.33
GTF3C1-205ENST00000564747 PLEKHA4Q9H4M7 779 aa17.14■□□□□ 0.33
GTF3C1-205ENST00000564747 FAM184BQ9ULE4 1060 aa17.14■□□□□ 0.33
GTF3C1-205ENST00000564747 ABCB11O95342 1321 aa17.14■□□□□ 0.33
GTF3C1-205ENST00000564747 BUB1O43683 1085 aa17.13■□□□□ 0.33
GTF3C1-205ENST00000564747 ASTE1Q2TB18 679 aaPredicted RBP17.13■□□□□ 0.33
GTF3C1-205ENST00000564747 HGSNATQ68CP4 663 aa17.13■□□□□ 0.33
GTF3C1-205ENST00000564747 PDXDC1Q6P996 788 aa17.13■□□□□ 0.33
GTF3C1-205ENST00000564747 MTMR8Q96EF0 704 aa17.13■□□□□ 0.33
GTF3C1-205ENST00000564747 IL1R1P14778 569 aa17.13■□□□□ 0.33
GTF3C1-205ENST00000564747 SLC1A4P43007 532 aa17.13■□□□□ 0.33
GTF3C1-205ENST00000564747 PICALMQ13492 652 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms