RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 HMGN5P82970 282 aaKnown RBP18.28■□□□□ 0.52
RAB40C-208ENST00000564703 GNPTABQ3T906 1256 aa18.28■□□□□ 0.52
RAB40C-208ENST00000564703 PCNX4Q63HM2 1172 aa18.28■□□□□ 0.52
RAB40C-208ENST00000564703 FAM184AQ8NB25 1140 aa18.28■□□□□ 0.52
RAB40C-208ENST00000564703 RTEL1Q9NZ71 1219 aa18.28■□□□□ 0.52
RAB40C-208ENST00000564703 Q9Y3F1 56 aa18.28■□□□□ 0.52
RAB40C-208ENST00000564703 LCTP09848 1927 aa18.27■□□□□ 0.52
RAB40C-208ENST00000564703 PGK1P00558 417 aa18.27■□□□□ 0.52
RAB40C-208ENST00000564703 SMPD1P17405 629 aa18.27■□□□□ 0.52
RAB40C-208ENST00000564703 ZNF76P36508 570 aa18.27■□□□□ 0.52
RAB40C-208ENST00000564703 DUSP28Q4G0W2 176 aa18.27■□□□□ 0.52
RAB40C-208ENST00000564703 BRDTQ58F21 947 aaPredicted RBP18.27■□□□□ 0.52
RAB40C-208ENST00000564703 NECAB2Q7Z6G3 386 aa18.27■□□□□ 0.52
RAB40C-208ENST00000564703 NLRX1Q86UT6 975 aa18.27■□□□□ 0.52
RAB40C-208ENST00000564703 TMX3Q96JJ7 454 aa18.27■□□□□ 0.52
RAB40C-208ENST00000564703 AIFM3Q96NN9 605 aa18.27■□□□□ 0.52
RAB40C-208ENST00000564703 ANO3Q9BYT9 981 aa18.27■□□□□ 0.52
RAB40C-208ENST00000564703 TMEM260Q9NX78 707 aa18.27■□□□□ 0.52
RAB40C-208ENST00000564703 PCDHA4Q9UN74 947 aa18.27■□□□□ 0.52
RAB40C-208ENST00000564703 MRVI1Q9Y6F6 885 aa18.27■□□□□ 0.52
RAB40C-208ENST00000564703 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.26■□□□□ 0.51
RAB40C-208ENST00000564703 ZEB2O60315 1214 aa18.26■□□□□ 0.51
RAB40C-208ENST00000564703 JAK2O60674 1132 aa18.26■□□□□ 0.51
RAB40C-208ENST00000564703 DTNBO60941 627 aa18.26■□□□□ 0.51
RAB40C-208ENST00000564703 C6orf222P0C671 652 aaPredicted RBP18.26■□□□□ 0.51
RAB40C-208ENST00000564703 TGFB3P10600 412 aa18.26■□□□□ 0.51
RAB40C-208ENST00000564703 FDPSP14324 419 aaKnown RBP18.26■□□□□ 0.51
RAB40C-208ENST00000564703 GNASQ5JWF2 1037 aa18.26■□□□□ 0.51
RAB40C-208ENST00000564703 GJC2Q5T442 439 aaPredicted RBP18.26■□□□□ 0.51
RAB40C-208ENST00000564703 BLIDQ8IZY5 108 aa18.26■□□□□ 0.51
RAB40C-208ENST00000564703 PCSK9Q8NBP7 692 aaKnown RBP18.26■□□□□ 0.51
RAB40C-208ENST00000564703 IL31RAQ8NI17 732 aa18.26■□□□□ 0.51
RAB40C-208ENST00000564703 ZFP91Q96JP5 570 aaPredicted RBP18.26■□□□□ 0.51
RAB40C-208ENST00000564703 BRMS1Q9HCU9 246 aa18.26■□□□□ 0.51
RAB40C-208ENST00000564703 KIF3AQ9Y496 699 aa18.26■□□□□ 0.51
RAB40C-208ENST00000564703 FRMPD4Q14CM0 1322 aa18.25■□□□□ 0.51
RAB40C-208ENST00000564703 DNM1LO00429 736 aa18.25■□□□□ 0.51
RAB40C-208ENST00000564703 CLK2P49760 499 aaKnown RBP18.25■□□□□ 0.51
RAB40C-208ENST00000564703 RGS19P49795 217 aa18.25■□□□□ 0.51
RAB40C-208ENST00000564703 LRRC41Q15345 812 aa18.25■□□□□ 0.51
RAB40C-208ENST00000564703 TLK2Q86UE8 772 aa18.25■□□□□ 0.51
RAB40C-208ENST00000564703 SHISA4Q96DD7 197 aa18.25■□□□□ 0.51
RAB40C-208ENST00000564703 PAWRQ96IZ0 340 aaKnown RBP18.25■□□□□ 0.51
RAB40C-208ENST00000564703 PGBD1Q96JS3 809 aa18.25■□□□□ 0.51
RAB40C-208ENST00000564703 KCNJ14Q9UNX9 436 aa18.25■□□□□ 0.51
RAB40C-208ENST00000564703 GNEQ9Y223 722 aaKnown RBP18.25■□□□□ 0.51
RAB40C-208ENST00000564703 GJA9P57773 515 aa18.24■□□□□ 0.51
RAB40C-208ENST00000564703 MRPS9P82933 396 aaKnown RBP18.24■□□□□ 0.51
RAB40C-208ENST00000564703 LY6KQ17RY6 165 aa18.24■□□□□ 0.51
RAB40C-208ENST00000564703 DHX37Q8IY37 1157 aaKnown RBP18.24■□□□□ 0.51
RAB40C-208ENST00000564703 OR6J1Q8NGC5 347 aa18.24■□□□□ 0.51
RAB40C-208ENST00000564703 LENG1Q96BZ8 264 aaPredicted RBP18.24■□□□□ 0.51
RAB40C-208ENST00000564703 CDHR1Q96JP9 859 aa18.24■□□□□ 0.51
RAB40C-208ENST00000564703 TSEN34Q9BSV6 310 aaKnown RBP18.24■□□□□ 0.51
RAB40C-208ENST00000564703 PHF20Q9BVI0 1012 aa18.24■□□□□ 0.51
RAB40C-208ENST00000564703 C11orf49Q9H6J7 331 aa18.24■□□□□ 0.51
RAB40C-208ENST00000564703 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.24■□□□□ 0.51
RAB40C-208ENST00000564703 HTTP42858 3142 aa18.24■□□□□ 0.51
RAB40C-208ENST00000564703 SYNRGQ9UMZ2 1314 aa18.23■□□□□ 0.51
RAB40C-208ENST00000564703 MAFGO15525 162 aa18.23■□□□□ 0.51
RAB40C-208ENST00000564703 FIBPO43427 364 aa18.23■□□□□ 0.51
RAB40C-208ENST00000564703 CD2BP2O95400 341 aaKnown RBP18.23■□□□□ 0.51
RAB40C-208ENST00000564703 GH1P01241 217 aa18.23■□□□□ 0.51
RAB40C-208ENST00000564703 ST3GAL1Q11201 340 aa18.23■□□□□ 0.51
RAB40C-208ENST00000564703 SAFBQ15424 915 aaKnown RBP eCLIP18.23■□□□□ 0.51
RAB40C-208ENST00000564703 DAGLBQ8NCG7 672 aa18.23■□□□□ 0.51
RAB40C-208ENST00000564703 VTI1AQ96AJ9 217 aa18.23■□□□□ 0.51
RAB40C-208ENST00000564703 C8orf76Q96K31 380 aa18.23■□□□□ 0.51
RAB40C-208ENST00000564703 INPP4AQ96PE3 977 aaPredicted RBP18.23■□□□□ 0.51
RAB40C-208ENST00000564703 SENP6Q9GZR1 1112 aaPredicted RBP18.23■□□□□ 0.51
RAB40C-208ENST00000564703 UPF3AQ9H1J1 476 aaKnown RBP18.23■□□□□ 0.51
RAB40C-208ENST00000564703 DDX41Q9UJV9 622 aaKnown RBP18.23■□□□□ 0.51
RAB40C-208ENST00000564703 CCDC194A0A1B0GVG4 234 aa18.22■□□□□ 0.51
RAB40C-208ENST00000564703 SPATA31C2B4DYI2 1134 aa18.22■□□□□ 0.51
RAB40C-208ENST00000564703 ADCY6O43306 1168 aa18.22■□□□□ 0.51
RAB40C-208ENST00000564703 ADAMTS4O75173 837 aa18.22■□□□□ 0.51
RAB40C-208ENST00000564703 SREBF1P36956 1147 aa18.22■□□□□ 0.51
RAB40C-208ENST00000564703 CPT1AP50416 773 aa18.22■□□□□ 0.51
RAB40C-208ENST00000564703 FOSBP53539 338 aa18.22■□□□□ 0.51
RAB40C-208ENST00000564703 ARHGAP4P98171 946 aa18.22■□□□□ 0.51
RAB40C-208ENST00000564703 MLLT1Q03111 559 aaPredicted RBP18.22■□□□□ 0.51
RAB40C-208ENST00000564703 LAMC2Q13753 1193 aa18.22■□□□□ 0.51
RAB40C-208ENST00000564703 NEDD9Q14511 834 aa18.22■□□□□ 0.51
RAB40C-208ENST00000564703 KCNA10Q16322 511 aa18.22■□□□□ 0.51
RAB40C-208ENST00000564703 FSCN1Q16658 493 aaKnown RBP18.22■□□□□ 0.51
RAB40C-208ENST00000564703 CCDC62Q6P9F0 684 aa18.22■□□□□ 0.51
RAB40C-208ENST00000564703 KRT25Q7Z3Z0 450 aa18.22■□□□□ 0.51
RAB40C-208ENST00000564703 RASGRP4Q8TDF6 673 aa18.22■□□□□ 0.51
RAB40C-208ENST00000564703 GPRASP2Q96D09 838 aa18.22■□□□□ 0.51
RAB40C-208ENST00000564703 HTATIP2Q9BUP3 242 aa18.22■□□□□ 0.51
RAB40C-208ENST00000564703 MLXIPQ9HAP2 919 aa18.22■□□□□ 0.51
RAB40C-208ENST00000564703 KIAA1217Q5T5P2 1943 aa18.21■□□□□ 0.51
RAB40C-208ENST00000564703 MOXD2PA6NHM9 499 aa18.21■□□□□ 0.51
RAB40C-208ENST00000564703 RGS20O76081 388 aa18.21■□□□□ 0.51
RAB40C-208ENST00000564703 ICAM3P32942 547 aa18.21■□□□□ 0.51
RAB40C-208ENST00000564703 KRT2P35908 639 aa18.21■□□□□ 0.51
RAB40C-208ENST00000564703 MTMR1Q13613 665 aa18.21■□□□□ 0.51
RAB40C-208ENST00000564703 NONOQ15233 471 aaKnown RBP eCLIP18.21■□□□□ 0.512e-6■■■■□ 24.7
RAB40C-208ENST00000564703 TMEM63BQ5T3F8 832 aa18.21■□□□□ 0.51
RAB40C-208ENST00000564703 KRT40Q6A162 431 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms