RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 ALPK3Q96L96 1907 aa19.88■□□□□ 0.77
USB1-209ENST00000564387 CPLX1O14810 134 aa19.87■□□□□ 0.77
USB1-209ENST00000564387 CTDNEP1O95476 244 aa19.87■□□□□ 0.77
USB1-209ENST00000564387 CCND2P30279 289 aa19.87■□□□□ 0.77
USB1-209ENST00000564387 ADCY7P51828 1080 aa19.87■□□□□ 0.77
USB1-209ENST00000564387 IRX5P78411 483 aaPredicted RBP19.87■□□□□ 0.77
USB1-209ENST00000564387 AKAP17AQ02040 695 aaKnown RBP19.87■□□□□ 0.77
USB1-209ENST00000564387 SSRP1Q08945 709 aaKnown RBP19.87■□□□□ 0.77
USB1-209ENST00000564387 TTLL4Q14679 1199 aa19.87■□□□□ 0.77
USB1-209ENST00000564387 KCNA10Q16322 511 aa19.87■□□□□ 0.77
USB1-209ENST00000564387 UBE2SQ16763 222 aa19.87■□□□□ 0.77
USB1-209ENST00000564387 CPLX2Q6PUV4 134 aaKnown RBP19.87■□□□□ 0.77
USB1-209ENST00000564387 TRIM22Q8IYM9 498 aa19.87■□□□□ 0.77
USB1-209ENST00000564387 PCSK9Q8NBP7 692 aaKnown RBP19.87■□□□□ 0.77
USB1-209ENST00000564387 CCDC12Q8WUD4 166 aaPredicted RBP19.87■□□□□ 0.77
USB1-209ENST00000564387 TBC1D32Q96NH3 1257 aa19.87■□□□□ 0.77
USB1-209ENST00000564387 INPP4AQ96PE3 977 aaPredicted RBP19.87■□□□□ 0.77
USB1-209ENST00000564387 SENP6Q9GZR1 1112 aaPredicted RBP19.87■□□□□ 0.77
USB1-209ENST00000564387 STK36Q9NRP7 1315 aa19.86■□□□□ 0.77
USB1-209ENST00000564387 DYNC1LI2O43237 492 aaPredicted RBP19.86■□□□□ 0.77
USB1-209ENST00000564387 DEXIO95424 95 aa19.86■□□□□ 0.77
USB1-209ENST00000564387 LARGE1O95461 756 aa19.86■□□□□ 0.77
USB1-209ENST00000564387 FOSP01100 380 aaPredicted RBP19.86■□□□□ 0.77
USB1-209ENST00000564387 C6orf222P0C671 652 aaPredicted RBP19.86■□□□□ 0.77
USB1-209ENST00000564387 TXNP10599 105 aaKnown RBP19.86■□□□□ 0.77
USB1-209ENST00000564387 TGFB3P10600 412 aa19.86■□□□□ 0.77
USB1-209ENST00000564387 PTGS1P23219 599 aa19.86■□□□□ 0.77
USB1-209ENST00000564387 ICAM3P32942 547 aa19.86■□□□□ 0.77
USB1-209ENST00000564387 ACLYP53396 1101 aa19.86■□□□□ 0.77
USB1-209ENST00000564387 GNASQ5JWF2 1037 aa19.86■□□□□ 0.77
USB1-209ENST00000564387 KCNV1Q6PIU1 500 aa19.86■□□□□ 0.77
USB1-209ENST00000564387 GTF3C6Q969F1 213 aa19.86■□□□□ 0.77
USB1-209ENST00000564387 UPF2Q9HAU5 1272 aaKnown RBP19.86■□□□□ 0.77
USB1-209ENST00000564387 DDX41Q9UJV9 622 aaKnown RBP19.86■□□□□ 0.77
USB1-209ENST00000564387 PCDHA6Q9UN73 950 aa19.86■□□□□ 0.77
USB1-209ENST00000564387 PCDHA8Q9Y5H6 950 aa19.86■□□□□ 0.77
USB1-209ENST00000564387 A0A1W2PQ45 241 aaPredicted RBP19.85■□□□□ 0.77
USB1-209ENST00000564387 A0A1W2PQY0 241 aa19.85■□□□□ 0.77
USB1-209ENST00000564387 CDKL5O76039 1030 aa19.85■□□□□ 0.77
USB1-209ENST00000564387 MYCLP12524 364 aaPredicted RBP19.85■□□□□ 0.77
USB1-209ENST00000564387 AP3B2Q13367 1082 aa19.85■□□□□ 0.77
USB1-209ENST00000564387 FSCN1Q16658 493 aaKnown RBP19.85■□□□□ 0.77
USB1-209ENST00000564387 LRRC26Q2I0M4 334 aa19.85■□□□□ 0.77
USB1-209ENST00000564387 SEPT14Q6ZU15 432 aa19.85■□□□□ 0.77
USB1-209ENST00000564387 EMID1Q96A84 441 aaPredicted RBP19.85■□□□□ 0.77
USB1-209ENST00000564387 AP5M1Q9H0R1 490 aa19.85■□□□□ 0.77
USB1-209ENST00000564387 LIMCH1Q9UPQ0 1083 aa19.85■□□□□ 0.77
USB1-209ENST00000564387 ELP1O95163 1332 aa19.84■□□□□ 0.77
USB1-209ENST00000564387 A6NJR5 290 aa19.84■□□□□ 0.77
USB1-209ENST00000564387 SPDYE3A6NKU9 549 aa19.84■□□□□ 0.77
USB1-209ENST00000564387 PPFIA3O75145 1194 aa19.84■□□□□ 0.77
USB1-209ENST00000564387 ASGR1P07306 291 aa19.84■□□□□ 0.77
USB1-209ENST00000564387 RABEP1Q15276 862 aa19.84■□□□□ 0.77
USB1-209ENST00000564387 MCTP2Q6DN12 878 aa19.84■□□□□ 0.77
USB1-209ENST00000564387 SLC39A5Q6ZMH5 540 aa19.84■□□□□ 0.77
USB1-209ENST00000564387 NOL8Q76FK4 1167 aaKnown RBP19.84■□□□□ 0.77
USB1-209ENST00000564387 CRYGNQ8WXF5 182 aa19.84■□□□□ 0.77
USB1-209ENST00000564387 SPATA31C2B4DYI2 1134 aa19.83■□□□□ 0.77
USB1-209ENST00000564387 ADAMTS3O15072 1205 aa19.83■□□□□ 0.77
USB1-209ENST00000564387 GNA11P29992 359 aa19.83■□□□□ 0.77
USB1-209ENST00000564387 ARHGAP1Q07960 439 aa19.83■□□□□ 0.77
USB1-209ENST00000564387 ST3GAL1Q11201 340 aa19.83■□□□□ 0.77
USB1-209ENST00000564387 LY6KQ17RY6 165 aa19.83■□□□□ 0.77
USB1-209ENST00000564387 CCDC148Q8NFR7 591 aa19.83■□□□□ 0.77
USB1-209ENST00000564387 COPS5Q92905 334 aa19.83■□□□□ 0.77
USB1-209ENST00000564387 C6orf50Q9HD87 102 aa19.83■□□□□ 0.77
USB1-209ENST00000564387 FDPSP14324 419 aaKnown RBP19.82■□□□□ 0.76
USB1-209ENST00000564387 SREBF1P36956 1147 aa19.82■□□□□ 0.76
USB1-209ENST00000564387 CPT1AP50416 773 aa19.82■□□□□ 0.76
USB1-209ENST00000564387 BEX3Q00994 111 aa19.82■□□□□ 0.76
USB1-209ENST00000564387 SP2Q02086 613 aa19.82■□□□□ 0.76
USB1-209ENST00000564387 SEMA3FQ13275 785 aa19.82■□□□□ 0.76
USB1-209ENST00000564387 NPY5RQ15761 445 aa19.82■□□□□ 0.76
USB1-209ENST00000564387 NECAB1Q8N987 351 aa19.82■□□□□ 0.76
USB1-209ENST00000564387 DPF3Q92784 378 aa19.82■□□□□ 0.76
USB1-209ENST00000564387 FERMT2Q96AC1 680 aa19.82■□□□□ 0.76
USB1-209ENST00000564387 ANO3Q9BYT9 981 aa19.82■□□□□ 0.76
USB1-209ENST00000564387 VPS54Q9P1Q0 977 aa19.82■□□□□ 0.76
USB1-209ENST00000564387 UBIAD1Q9Y5Z9 338 aa19.82■□□□□ 0.76
USB1-209ENST00000564387 MRVI1Q9Y6F6 885 aa19.82■□□□□ 0.76
USB1-209ENST00000564387 M0R2N6 131 aa19.81■□□□□ 0.76
USB1-209ENST00000564387 ZEB2O60315 1214 aa19.81■□□□□ 0.76
USB1-209ENST00000564387 CABYRO75952 493 aa19.81■□□□□ 0.76
USB1-209ENST00000564387 GH1P01241 217 aa19.81■□□□□ 0.76
USB1-209ENST00000564387 MYCNP04198 464 aaPredicted RBP19.81■□□□□ 0.76
USB1-209ENST00000564387 ITGB5P18084 799 aa19.81■□□□□ 0.76
USB1-209ENST00000564387 GNPTABQ3T906 1256 aa19.81■□□□□ 0.76
USB1-209ENST00000564387 SLC43A3Q8NBI5 491 aa19.81■□□□□ 0.76
USB1-209ENST00000564387 NSUN7Q8NE18 718 aaKnown RBP19.81■□□□□ 0.76
USB1-209ENST00000564387 OR6J1Q8NGC5 347 aa19.81■□□□□ 0.76
USB1-209ENST00000564387 BICD2Q8TD16 824 aa19.81■□□□□ 0.76
USB1-209ENST00000564387 GPRASP2Q96D09 838 aa19.81■□□□□ 0.76
USB1-209ENST00000564387 ZSCAN31Q96LW9 406 aaPredicted RBP19.81■□□□□ 0.76
USB1-209ENST00000564387 EHMT1Q9H9B1 1298 aa19.81■□□□□ 0.76
USB1-209ENST00000564387 TMEM260Q9NX78 707 aa19.81■□□□□ 0.76
USB1-209ENST00000564387 MAFGO15525 162 aa19.8■□□□□ 0.76
USB1-209ENST00000564387 FIBPO43427 364 aa19.8■□□□□ 0.76
USB1-209ENST00000564387 EVI5O60447 810 aa19.8■□□□□ 0.76
USB1-209ENST00000564387 CYP3A4P08684 503 aa19.8■□□□□ 0.76
USB1-209ENST00000564387 HOXD8P13378 290 aaPredicted RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms