RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 FCHSD1Q86WN1 690 aa19.9■□□□□ 0.78
GDE1-203ENST00000564172 CYP3A7-CYP3A51PA0A087WV96 503 aa19.9■□□□□ 0.78
GDE1-203ENST00000564172 TPM3P06753 285 aa19.9■□□□□ 0.78
GDE1-203ENST00000564172 CYP3A7P24462 503 aa19.9■□□□□ 0.78
GDE1-203ENST00000564172 CDC25AP30304 524 aa19.9■□□□□ 0.78
GDE1-203ENST00000564172 FMR1Q06787 632 aaKnown RBP eCLIP19.9■□□□□ 0.78
GDE1-203ENST00000564172 LDLRAD1Q5T700 205 aa19.9■□□□□ 0.78
GDE1-203ENST00000564172 CLEC4DQ8WXI8 215 aa19.9■□□□□ 0.78
GDE1-203ENST00000564172 KIAA1468Q9P260 1216 aa19.9■□□□□ 0.78
GDE1-203ENST00000564172 SERTAD1Q9UHV2 236 aa19.9■□□□□ 0.78
GDE1-203ENST00000564172 PNMA2Q9UL42 364 aa19.9■□□□□ 0.78
GDE1-203ENST00000564172 MYH7BA7E2Y1 1941 aa19.89■□□□□ 0.77
GDE1-203ENST00000564172 GOLGA6L6A8MZA4 724 aa19.89■□□□□ 0.77
GDE1-203ENST00000564172 ALAS1P13196 640 aa19.89■□□□□ 0.77
GDE1-203ENST00000564172 CT47A1Q5JQC4 288 aaPredicted RBP19.89■□□□□ 0.77
GDE1-203ENST00000564172 MOXD1Q6UVY6 613 aa19.89■□□□□ 0.77
GDE1-203ENST00000564172 ELOA2Q8IYF1 753 aaPredicted RBP19.89■□□□□ 0.77
GDE1-203ENST00000564172 RNF214Q8ND24 703 aa19.89■□□□□ 0.77
GDE1-203ENST00000564172 REPS2Q8NFH8 660 aa19.89■□□□□ 0.77
GDE1-203ENST00000564172 HOXC10Q9NYD6 342 aa19.89■□□□□ 0.77
GDE1-203ENST00000564172 NFIBO00712 420 aa19.88■□□□□ 0.77
GDE1-203ENST00000564172 CXCL11O14625 94 aa19.88■□□□□ 0.77
GDE1-203ENST00000564172 ACTN4O43707 911 aaKnown RBP19.88■□□□□ 0.77
GDE1-203ENST00000564172 TXKP42681 527 aa19.88■□□□□ 0.77
GDE1-203ENST00000564172 MBOAT7Q96N66 472 aa19.88■□□□□ 0.77
GDE1-203ENST00000564172 A0A0G2JLL6 359 aaPredicted RBP19.88■□□□□ 0.77
GDE1-203ENST00000564172 ERICH4A6NGS2 130 aa19.88■□□□□ 0.77
GDE1-203ENST00000564172 KIF1CO43896 1103 aaKnown RBP19.88■□□□□ 0.77
GDE1-203ENST00000564172 TREML2Q5T2D2 321 aa19.88■□□□□ 0.77
GDE1-203ENST00000564172 PRRT2Q7Z6L0 340 aaPredicted RBP19.88■□□□□ 0.77
GDE1-203ENST00000564172 AK8Q96MA6 479 aa19.88■□□□□ 0.77
GDE1-203ENST00000564172 CASQ1P31415 396 aa19.87■□□□□ 0.77
GDE1-203ENST00000564172 TECP42680 631 aa19.87■□□□□ 0.77
GDE1-203ENST00000564172 HSD17B4P51659 736 aa19.87■□□□□ 0.77
GDE1-203ENST00000564172 RLFQ13129 1914 aa19.87■□□□□ 0.77
GDE1-203ENST00000564172 PPIL2Q13356 520 aa19.87■□□□□ 0.77
GDE1-203ENST00000564172 MYPNQ86TC9 1320 aa19.87■□□□□ 0.77
GDE1-203ENST00000564172 MCF2L2Q86YR7 1114 aa19.87■□□□□ 0.77
GDE1-203ENST00000564172 DHX58Q96C10 678 aa19.87■□□□□ 0.77
GDE1-203ENST00000564172 ZNF408Q9H9D4 720 aa19.87■□□□□ 0.77
GDE1-203ENST00000564172 KCNH4Q9UQ05 1017 aa19.87■□□□□ 0.77
GDE1-203ENST00000564172 PP2D1A8MPX8 630 aa19.87■□□□□ 0.77
GDE1-203ENST00000564172 CYP3A4P08684 503 aa19.87■□□□□ 0.77
GDE1-203ENST00000564172 OAZ1P54368 228 aa19.87■□□□□ 0.77
GDE1-203ENST00000564172 MDM2Q00987 491 aaPredicted RBP19.87■□□□□ 0.77
GDE1-203ENST00000564172 GHRHRQ02643 423 aa19.87■□□□□ 0.77
GDE1-203ENST00000564172 IGSF22Q8N9C0 903 aa19.87■□□□□ 0.77
GDE1-203ENST00000564172 HAS1Q92839 578 aa19.87■□□□□ 0.77
GDE1-203ENST00000564172 OPTNQ96CV9 577 aa19.87■□□□□ 0.77
GDE1-203ENST00000564172 HOMER2Q9NSB8 354 aa19.87■□□□□ 0.77
GDE1-203ENST00000564172 PARP14Q460N5 1801 aa19.86■□□□□ 0.77
GDE1-203ENST00000564172 SPDYE16A6NNV3 312 aaPredicted RBP19.86■□□□□ 0.77
GDE1-203ENST00000564172 CIITAP33076 1130 aa19.86■□□□□ 0.77
GDE1-203ENST00000564172 TXLNAP40222 546 aa19.86■□□□□ 0.77
GDE1-203ENST00000564172 UBA7P41226 1012 aa19.86■□□□□ 0.77
GDE1-203ENST00000564172 PNOCQ13519 176 aa19.86■□□□□ 0.77
GDE1-203ENST00000564172 KANK3Q6NY19 840 aa19.86■□□□□ 0.77
GDE1-203ENST00000564172 PROCA1Q8NCQ7 364 aaPredicted RBP19.86■□□□□ 0.77
GDE1-203ENST00000564172 KIAA1524Q8TCG1 905 aa19.86■□□□□ 0.77
GDE1-203ENST00000564172 CCSER1Q9C0I3 900 aa19.86■□□□□ 0.77
GDE1-203ENST00000564172 DONSONQ9NYP3 566 aa19.86■□□□□ 0.77
GDE1-203ENST00000564172 ZNF214Q9UL59 606 aaPredicted RBP19.86■□□□□ 0.77
GDE1-203ENST00000564172 FOXN1O15353 648 aa19.86■□□□□ 0.77
GDE1-203ENST00000564172 FXR2P51116 673 aaKnown RBP eCLIP19.86■□□□□ 0.77
GDE1-203ENST00000564172 TMEM132BQ14DG7 1078 aa19.86■□□□□ 0.77
GDE1-203ENST00000564172 E2F4Q16254 413 aa19.86■□□□□ 0.77
GDE1-203ENST00000564172 GADL1Q6ZQY3 521 aa19.86■□□□□ 0.77
GDE1-203ENST00000564172 TRERF1Q96PN7 1200 aa19.86■□□□□ 0.77
GDE1-203ENST00000564172 PYM1Q9BRP8 204 aaKnown RBP19.86■□□□□ 0.77
GDE1-203ENST00000564172 RIPK3Q9Y572 518 aa19.86■□□□□ 0.77
GDE1-203ENST00000564172 PTPRFP10586 1907 aa19.85■□□□□ 0.77
GDE1-203ENST00000564172 FAM86B1E9PN63 330 aa19.85■□□□□ 0.77
GDE1-203ENST00000564172 ATP2A1O14983 1001 aa19.85■□□□□ 0.77
GDE1-203ENST00000564172 FAM86B2P0C5J1 330 aa19.85■□□□□ 0.77
GDE1-203ENST00000564172 HOXA7P31268 230 aaPredicted RBP19.85■□□□□ 0.77
GDE1-203ENST00000564172 ANO6Q4KMQ2 910 aa19.85■□□□□ 0.77
GDE1-203ENST00000564172 IQUBQ8NA54 791 aa19.85■□□□□ 0.77
GDE1-203ENST00000564172 TTC12Q9H892 705 aaPredicted RBP19.85■□□□□ 0.77
GDE1-203ENST00000564172 KCNMB3Q9NPA1 279 aa19.85■□□□□ 0.77
GDE1-203ENST00000564172 NMRK2Q9NPI5 230 aa19.85■□□□□ 0.77
GDE1-203ENST00000564172 USP25Q9UHP3 1055 aa19.85■□□□□ 0.77
GDE1-203ENST00000564172 HOOK1Q9UJC3 728 aaKnown RBP19.85■□□□□ 0.77
GDE1-203ENST00000564172 KARSQ15046 597 aaKnown RBP19.84■□□□□ 0.77
GDE1-203ENST00000564172 TMEM266Q2M3C6 531 aa19.84■□□□□ 0.77
GDE1-203ENST00000564172 Q4G0T1 1027 aa19.84■□□□□ 0.77
GDE1-203ENST00000564172 PRR16Q569H4 304 aa19.84■□□□□ 0.77
GDE1-203ENST00000564172 MAP3K20Q9NYL2 800 aaKnown RBP19.84■□□□□ 0.77
GDE1-203ENST00000564172 TUBE1Q9UJT0 475 aa19.84■□□□□ 0.77
GDE1-203ENST00000564172 A0A087WWV3 80 aa19.84■□□□□ 0.77
GDE1-203ENST00000564172 DCAF8L1A6NGE4 600 aa19.84■□□□□ 0.77
GDE1-203ENST00000564172 UNCXA6NJT0 531 aa19.84■□□□□ 0.77
GDE1-203ENST00000564172 MARCH6O60337 910 aa19.84■□□□□ 0.77
GDE1-203ENST00000564172 PDIA5Q14554 519 aa19.84■□□□□ 0.77
GDE1-203ENST00000564172 POSTNQ15063 836 aa19.84■□□□□ 0.77
GDE1-203ENST00000564172 SNRNP48Q6IEG0 339 aaKnown RBP19.84■□□□□ 0.77
GDE1-203ENST00000564172 CEP57L1Q8IYX8 460 aa19.84■□□□□ 0.77
GDE1-203ENST00000564172 SAMD3Q8N6K7 520 aa19.84■□□□□ 0.77
GDE1-203ENST00000564172 LENG9Q96B70 501 aa19.84■□□□□ 0.77
GDE1-203ENST00000564172 SLC10A4Q96EP9 437 aa19.84■□□□□ 0.77
GDE1-203ENST00000564172 EHMT1Q9H9B1 1298 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms