RNA–Protein interactions for RNA: ENST00000563678.1

CLUHP3-207, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

BASIC

Gene CLUHP3, Length 1,303 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-207ENST00000563678 NCOA7Q8NI08 942 aa13.17□□□□□ -0.3
CLUHP3-207ENST00000563678 KIFC2Q96AC6 838 aa13.17□□□□□ -0.3
CLUHP3-207ENST00000563678 ACAD9Q9H845 621 aa13.17□□□□□ -0.3
CLUHP3-207ENST00000563678 CNNM2Q9H8M5 875 aa13.17□□□□□ -0.3
CLUHP3-207ENST00000563678 MKNK2Q9HBH9 465 aa13.17□□□□□ -0.3
CLUHP3-207ENST00000563678 PDGFCQ9NRA1 345 aa13.17□□□□□ -0.3
CLUHP3-207ENST00000563678 MYO7AQ13402 2215 aa13.17□□□□□ -0.3
CLUHP3-207ENST00000563678 CYP2D7A0A087X1C5 515 aa13.16□□□□□ -0.3
CLUHP3-207ENST00000563678 SOWAHBA6NEL2 793 aa13.16□□□□□ -0.3
CLUHP3-207ENST00000563678 C19orf67A6NJJ6 358 aa13.16□□□□□ -0.3
CLUHP3-207ENST00000563678 USP17L12C9JPN9 530 aa13.16□□□□□ -0.3
CLUHP3-207ENST00000563678 USP17L21D6R901 530 aa13.16□□□□□ -0.3
CLUHP3-207ENST00000563678 F5H6K3 240 aa13.16□□□□□ -0.3
CLUHP3-207ENST00000563678 H3BQ06 376 aaPredicted RBP13.16□□□□□ -0.3
CLUHP3-207ENST00000563678 K7ELQ4 463 aaPredicted RBP13.16□□□□□ -0.3
CLUHP3-207ENST00000563678 FGRP09769 529 aa13.16□□□□□ -0.3
CLUHP3-207ENST00000563678 PURAQ00577 322 aaKnown RBP13.16□□□□□ -0.3
CLUHP3-207ENST00000563678 KLRC3Q07444 240 aa13.16□□□□□ -0.3
CLUHP3-207ENST00000563678 BFSP2Q13515 415 aa13.16□□□□□ -0.3
CLUHP3-207ENST00000563678 FAM47CQ5HY64 1035 aa13.16□□□□□ -0.3
CLUHP3-207ENST00000563678 TAPT1Q6NXT6 567 aa13.16□□□□□ -0.3
CLUHP3-207ENST00000563678 FBXO16Q8IX29 292 aaPredicted RBP13.16□□□□□ -0.3
CLUHP3-207ENST00000563678 PRSS33Q8NF86 280 aa13.16□□□□□ -0.3
CLUHP3-207ENST00000563678 RAD9AQ99638 391 aa13.16□□□□□ -0.3
CLUHP3-207ENST00000563678 A1CFQ9NQ94 594 aaKnown RBP13.16□□□□□ -0.3
CLUHP3-207ENST00000563678 HOMER2Q9NSB8 354 aa13.16□□□□□ -0.3
CLUHP3-207ENST00000563678 SIP14410 1827 aa13.16□□□□□ -0.3
CLUHP3-207ENST00000563678 LINC01553A4QN01 128 aa13.15□□□□□ -0.3
CLUHP3-207ENST00000563678 GJB5O95377 273 aa13.15□□□□□ -0.3
CLUHP3-207ENST00000563678 CTDSPL2Q05D32 466 aa13.15□□□□□ -0.3
CLUHP3-207ENST00000563678 PDE4BQ07343 736 aa13.15□□□□□ -0.3
CLUHP3-207ENST00000563678 TRDNQ13061 729 aa13.15□□□□□ -0.3
CLUHP3-207ENST00000563678 DHX32Q7L7V1 743 aaKnown RBP13.15□□□□□ -0.3
CLUHP3-207ENST00000563678 TMCO2Q7Z6W1 182 aaPredicted RBP13.15□□□□□ -0.3
CLUHP3-207ENST00000563678 ADHFE1Q8IWW8 467 aa13.15□□□□□ -0.3
CLUHP3-207ENST00000563678 ZNF444Q8N0Y2 327 aaPredicted RBP13.15□□□□□ -0.3
CLUHP3-207ENST00000563678 FBXL16Q8N461 479 aa13.15□□□□□ -0.3
CLUHP3-207ENST00000563678 PRRX2Q99811 253 aa13.15□□□□□ -0.3
CLUHP3-207ENST00000563678 MTG1Q9BT17 334 aaPredicted RBP13.15□□□□□ -0.3
CLUHP3-207ENST00000563678 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.15□□□□□ -0.3
CLUHP3-207ENST00000563678 AGXT2Q9BYV1 514 aa13.15□□□□□ -0.3
CLUHP3-207ENST00000563678 KRT23Q9C075 422 aa13.15□□□□□ -0.3
CLUHP3-207ENST00000563678 VTA1Q9NP79 307 aa13.15□□□□□ -0.3
CLUHP3-207ENST00000563678 NYAP2Q9P242 653 aa13.15□□□□□ -0.3
CLUHP3-207ENST00000563678 FEM1BQ9UK73 627 aa13.15□□□□□ -0.3
CLUHP3-207ENST00000563678 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.15□□□□□ -0.3
CLUHP3-207ENST00000563678 CACNA1BQ00975 2339 aa13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 MINDY4BA8MYZ0 360 aa13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 ORC4O43929 436 aa13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 MYL3P08590 195 aa13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 FDX1P10109 184 aa13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 CPA1P15085 419 aa13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 MCM5P33992 734 aa13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 CPT1AP50416 773 aa13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 AK2P54819 239 aa13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 DEFB103AP81534 67 aa13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 EXOSC10Q01780 885 aaKnown RBP13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 COL9A3Q14050 684 aaPredicted RBP13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 ANKRD1Q15327 319 aa13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 NBPF20Q3BBV1 942 aa13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 DUSP28Q4G0W2 176 aa13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 TIGD5Q53EQ6 642 aa13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 TMEM63BQ5T3F8 832 aa13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 NFRKBQ6P4R8 1299 aa13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 MFSD6Q6ZSS7 791 aa13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 EEPD1Q7L9B9 569 aa13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 MRPL38Q96DV4 380 aaKnown RBP13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 MTA3Q9BTC8 594 aa13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 GPHNQ9NQX3 736 aaPredicted RBP13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 RNF146Q9NTX7 359 aa13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 PDRG1Q9NUG6 133 aa13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 TRIP12Q14669 1992 aaPredicted RBP13.14□□□□□ -0.31
CLUHP3-207ENST00000563678 GFRA3O60609 400 aa13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 IRS1P35568 1242 aa13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 PTPN11Q06124 597 aaPredicted RBP13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 PTPROQ16827 1216 aa13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 HERC4Q5GLZ8 1057 aaPredicted RBP13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 CCDC155Q8N6L0 562 aa13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 FBXO22Q8NEZ5 403 aa13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 PABPC5Q96DU9 382 aaKnown RBP13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 SYNPO2Q9UMS6 1093 aa13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 NOD1Q9Y239 953 aa13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 DDX49Q9Y6V7 483 aaKnown RBP13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 B4E1Z4 1266 aa13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 ANTXR2P58335 489 aa13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 TOB2Q14106 344 aaPredicted RBP13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 COL19A1Q14993 1142 aa13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 PKN1Q16512 942 aa13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 TKFCQ3LXA3 575 aa13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 BRDTQ58F21 947 aaPredicted RBP13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 CNKSR3Q6P9H4 555 aa13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 BMP8AQ7Z5Y6 402 aa13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 CAGE1Q8TC20 777 aa13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 AFAP1L1Q8TED9 768 aa13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 POP1Q99575 1024 aaKnown RBP13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 MUTYHQ9UIF7 546 aa13.13□□□□□ -0.31
CLUHP3-207ENST00000563678 C5orf42Q9H799 3197 aa13.12□□□□□ -0.31
CLUHP3-207ENST00000563678 GVINP1Q7Z2Y8 2422 aa13.12□□□□□ -0.31
CLUHP3-207ENST00000563678 PLIN4Q96Q06 1357 aa13.12□□□□□ -0.31
CLUHP3-207ENST00000563678 ABHD14A-ACY1A0A1B0GW23 586 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms