RNA–Protein interactions for RNA: ENST00000563597.5

PPP4C-206, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 3

Gene PPP4C, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-206	ENST00000563597	SUPT20HL2	P0C7V6	817 aa		28.68	■■■□□ 2.18
PPP4C-206	ENST00000563597	MYCL	P12524	364 aa	Predicted RBP	28.68	■■■□□ 2.18
PPP4C-206	ENST00000563597	CSF2RA	P15509	400 aa		28.68	■■■□□ 2.18
PPP4C-206	ENST00000563597	SMAD3	P84022	425 aa	Known RBP	28.68	■■■□□ 2.18
PPP4C-206	ENST00000563597	KRT32	Q14532	448 aa		28.68	■■■□□ 2.18
PPP4C-206	ENST00000563597	KCNV1	Q6PIU1	500 aa		28.68	■■■□□ 2.18
PPP4C-206	ENST00000563597	FCHSD1	Q86WN1	690 aa		28.68	■■■□□ 2.18
PPP4C-206	ENST00000563597	SRBD1	Q8N5C6	995 aa	Known RBP	28.68	■■■□□ 2.18
PPP4C-206	ENST00000563597	AFG1L	Q8WV93	481 aa		28.68	■■■□□ 2.18
PPP4C-206	ENST00000563597	EMID1	Q96A84	441 aa	Predicted RBP	28.68	■■■□□ 2.18
PPP4C-206	ENST00000563597	MMP3	P08254	477 aa		28.67	■■■□□ 2.18
PPP4C-206	ENST00000563597	RXRA	P19793	462 aa		28.67	■■■□□ 2.18
PPP4C-206	ENST00000563597	CCND2	P30279	289 aa		28.67	■■■□□ 2.18
PPP4C-206	ENST00000563597	CYP2C18	P33260	490 aa		28.67	■■■□□ 2.18
PPP4C-206	ENST00000563597	NBPF20	Q3BBV1	942 aa		28.67	■■■□□ 2.18
PPP4C-206	ENST00000563597	NFRKB	Q6P4R8	1299 aa		28.67	■■■□□ 2.18
PPP4C-206	ENST00000563597	SYNE3	Q6ZMZ3	975 aa		28.67	■■■□□ 2.18
PPP4C-206	ENST00000563597	NOC4L	Q9BVI4	516 aa	Known RBP	28.67	■■■□□ 2.18
PPP4C-206	ENST00000563597	RGS20	O76081	388 aa		28.66	■■■□□ 2.18
PPP4C-206	ENST00000563597	PTPN11	Q06124	597 aa	Predicted RBP	28.66	■■■□□ 2.18
PPP4C-206	ENST00000563597	DHX32	Q7L7V1	743 aa	Known RBP	28.66	■■■□□ 2.18
PPP4C-206	ENST00000563597	RASEF	Q8IZ41	740 aa		28.66	■■■□□ 2.18
PPP4C-206	ENST00000563597	FANCB	Q8NB91	859 aa		28.66	■■■□□ 2.18
PPP4C-206	ENST00000563597	IL31RA	Q8NI17	732 aa		28.66	■■■□□ 2.18
PPP4C-206	ENST00000563597	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	28.66	■■■□□ 2.18	2e-6	■■■■□ 20.1
PPP4C-206	ENST00000563597	MTMR10	Q9NXD2	777 aa		28.66	■■■□□ 2.18
PPP4C-206	ENST00000563597	EXOSC10	Q01780	885 aa	Known RBP	28.65	■■■□□ 2.18
PPP4C-206	ENST00000563597	LAMC2	Q13753	1193 aa		28.65	■■■□□ 2.18
PPP4C-206	ENST00000563597	PSRC1	Q6PGN9	363 aa	Predicted RBP	28.65	■■■□□ 2.18
PPP4C-206	ENST00000563597	MICU3	Q86XE3	530 aa		28.65	■■■□□ 2.18
PPP4C-206	ENST00000563597	TRMT13	Q9NUP7	481 aa	Known RBP	28.65	■■■□□ 2.18
PPP4C-206	ENST00000563597	FRMPD4	Q14CM0	1322 aa		28.65	■■■□□ 2.18
PPP4C-206	ENST00000563597	COL6A3	P12111	3177 aa		28.64	■■■□□ 2.18
PPP4C-206	ENST00000563597	TGFB3	P10600	412 aa		28.64	■■■□□ 2.18
PPP4C-206	ENST00000563597	CAST	P20810	708 aa	Known RBP	28.64	■■■□□ 2.18
PPP4C-206	ENST00000563597	DGKD	Q16760	1214 aa		28.64	■■■□□ 2.18
PPP4C-206	ENST00000563597	FAM47C	Q5HY64	1035 aa		28.64	■■■□□ 2.18
PPP4C-206	ENST00000563597	APOA5	Q6Q788	366 aa		28.64	■■■□□ 2.18
PPP4C-206	ENST00000563597	TMTC3	Q6ZXV5	915 aa		28.64	■■■□□ 2.18
PPP4C-206	ENST00000563597	C16orf59	Q7L2K0	433 aa		28.64	■■■□□ 2.18
PPP4C-206	ENST00000563597	CMTR1	Q8N1G2	835 aa	Known RBP	28.64	■■■□□ 2.18
PPP4C-206	ENST00000563597	CUL5	Q93034	780 aa		28.64	■■■□□ 2.18
PPP4C-206	ENST00000563597	PIK3CD	O00329	1044 aa		28.63	■■■□□ 2.17
PPP4C-206	ENST00000563597	STAM2	O75886	525 aa		28.63	■■■□□ 2.17
PPP4C-206	ENST00000563597	HMGB1	P09429	215 aa	Known RBP	28.63	■■■□□ 2.17
PPP4C-206	ENST00000563597	ADCK5	Q3MIX3	580 aa		28.63	■■■□□ 2.17
PPP4C-206	ENST00000563597	TMEM240	Q5SV17	173 aa		28.63	■■■□□ 2.17
PPP4C-206	ENST00000563597	RAB11FIP4	Q86YS3	637 aa		28.63	■■■□□ 2.17
PPP4C-206	ENST00000563597	DHX37	Q8IY37	1157 aa	Known RBP	28.63	■■■□□ 2.17
PPP4C-206	ENST00000563597	PPTC7	Q8NI37	304 aa		28.63	■■■□□ 2.17
PPP4C-206	ENST00000563597	IL23A	Q9NPF7	189 aa		28.63	■■■□□ 2.17
PPP4C-206	ENST00000563597	UMODL1	Q5DID0	1318 aa		28.63	■■■□□ 2.17
PPP4C-206	ENST00000563597	ZNF697	Q5TEC3	545 aa		28.62	■■■□□ 2.17
PPP4C-206	ENST00000563597	SMARCC2	Q8TAQ2	1214 aa		28.62	■■■□□ 2.17
PPP4C-206	ENST00000563597	CCL23	P55773	120 aa		28.61	■■■□□ 2.17
PPP4C-206	ENST00000563597	GNPTAB	Q3T906	1256 aa		28.61	■■■□□ 2.17
PPP4C-206	ENST00000563597	MYSM1	Q5VVJ2	828 aa		28.61	■■■□□ 2.17
PPP4C-206	ENST00000563597	WNT8A	Q9H1J5	351 aa		28.61	■■■□□ 2.17
PPP4C-206	ENST00000563597	RBM28	Q9NW13	759 aa	Known RBP	28.61	■■■□□ 2.17
PPP4C-206	ENST00000563597	MEIS2	O14770	477 aa		28.6	■■■□□ 2.17
PPP4C-206	ENST00000563597	CYP2C9	P11712	490 aa		28.6	■■■□□ 2.17
PPP4C-206	ENST00000563597	CELF3	Q5SZQ8	465 aa	Known RBP	28.6	■■■□□ 2.17
PPP4C-206	ENST00000563597	USP17L6P	Q6QN14	398 aa		28.6	■■■□□ 2.17
PPP4C-206	ENST00000563597	ZNF365	Q70YC5	407 aa		28.6	■■■□□ 2.17
PPP4C-206	ENST00000563597	CCDC82	Q8N4S0	544 aa		28.6	■■■□□ 2.17
PPP4C-206	ENST00000563597	KCNB2	Q92953	911 aa		28.6	■■■□□ 2.17
PPP4C-206	ENST00000563597	TCEANC2	Q96MN5	208 aa		28.6	■■■□□ 2.17
PPP4C-206	ENST00000563597	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	28.59	■■■□□ 2.17
PPP4C-206	ENST00000563597	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	28.59	■■■□□ 2.17
PPP4C-206	ENST00000563597	GGPS1	O95749	300 aa		28.59	■■■□□ 2.17
PPP4C-206	ENST00000563597	ACR	P10323	421 aa		28.59	■■■□□ 2.17
PPP4C-206	ENST00000563597	UBA1	P22314	1058 aa	Known RBP	28.59	■■■□□ 2.17
PPP4C-206	ENST00000563597	RASIP1	Q5U651	963 aa		28.59	■■■□□ 2.17
PPP4C-206	ENST00000563597	XRRA1	Q6P2D8	792 aa		28.59	■■■□□ 2.17
PPP4C-206	ENST00000563597	SESTD1	Q86VW0	696 aa		28.59	■■■□□ 2.17
PPP4C-206	ENST00000563597	KAT2B	Q92831	832 aa		28.59	■■■□□ 2.17
PPP4C-206	ENST00000563597	INPP4A	Q96PE3	977 aa	Predicted RBP	28.59	■■■□□ 2.17
PPP4C-206	ENST00000563597	KATNAL1	Q9BW62	490 aa		28.59	■■■□□ 2.17
PPP4C-206	ENST00000563597	STXBP5L	Q9Y2K9	1186 aa		28.59	■■■□□ 2.17
PPP4C-206	ENST00000563597	ZBTB43	O43298	467 aa		28.58	■■■□□ 2.17
PPP4C-206	ENST00000563597	REC8	O95072	547 aa		28.58	■■■□□ 2.17
PPP4C-206	ENST00000563597	HOXD8	P13378	290 aa	Predicted RBP	28.58	■■■□□ 2.17
PPP4C-206	ENST00000563597	HSPA4	P34932	840 aa		28.58	■■■□□ 2.17
PPP4C-206	ENST00000563597	CHMP4BP1	P59074	171 aa		28.58	■■■□□ 2.17
PPP4C-206	ENST00000563597	MRPS9	P82933	396 aa	Known RBP	28.58	■■■□□ 2.17
PPP4C-206	ENST00000563597	SPATA33	Q96N06	139 aa		28.58	■■■□□ 2.17
PPP4C-206	ENST00000563597	MTIF3	Q9H2K0	278 aa	Known RBP	28.58	■■■□□ 2.17
PPP4C-206	ENST00000563597	PSTPIP2	Q9H939	334 aa		28.58	■■■□□ 2.17
PPP4C-206	ENST00000563597	BRPF3	Q9ULD4	1205 aa		28.58	■■■□□ 2.17
PPP4C-206	ENST00000563597	NOD1	Q9Y239	953 aa		28.58	■■■□□ 2.17
PPP4C-206	ENST00000563597	MYH7B	A7E2Y1	1941 aa		28.58	■■■□□ 2.17
PPP4C-206	ENST00000563597	TMEM265	A0A087WTH1	108 aa		28.57	■■■□□ 2.16
PPP4C-206	ENST00000563597	PITPNM1	O00562	1244 aa		28.57	■■■□□ 2.16
PPP4C-206	ENST00000563597	PPFIA4	O75335	1185 aa		28.57	■■■□□ 2.16
PPP4C-206	ENST00000563597	F2	P00734	622 aa		28.57	■■■□□ 2.16
PPP4C-206	ENST00000563597	ICAM3	P32942	547 aa		28.57	■■■□□ 2.16
PPP4C-206	ENST00000563597	RCAN1	P53805	252 aa		28.57	■■■□□ 2.16
PPP4C-206	ENST00000563597	SP2	Q02086	613 aa		28.57	■■■□□ 2.16
PPP4C-206	ENST00000563597	RTN1	Q16799	776 aa		28.57	■■■□□ 2.16
PPP4C-206	ENST00000563597	PCNX4	Q63HM2	1172 aa		28.57	■■■□□ 2.16

Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms