RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 ZC3H12DA2A288 527 aaKnown RBP7.29□□□□□ -1.24
LINC00254-201ENST00000563416 DBX1A6NMT0 343 aa7.29□□□□□ -1.24
LINC00254-201ENST00000563416 C22orf46C9J442 243 aa7.29□□□□□ -1.24
LINC00254-201ENST00000563416 ZBTB7AO95365 584 aa7.29□□□□□ -1.24
LINC00254-201ENST00000563416 SLC9A5Q14940 896 aa7.29□□□□□ -1.24
LINC00254-201ENST00000563416 MROH9Q5TGP6 573 aa7.29□□□□□ -1.24
LINC00254-201ENST00000563416 RSPO2Q6UXX9 243 aaPredicted RBP7.29□□□□□ -1.24
LINC00254-201ENST00000563416 CEP68Q76N32 757 aa7.29□□□□□ -1.24
LINC00254-201ENST00000563416 TEX2Q8IWB9 1127 aa7.29□□□□□ -1.24
LINC00254-201ENST00000563416 DPF3Q92784 378 aa7.29□□□□□ -1.24
LINC00254-201ENST00000563416 TRMT2BQ96GJ1 504 aaKnown RBP7.29□□□□□ -1.24
LINC00254-201ENST00000563416 TMEM169Q96HH4 297 aa7.29□□□□□ -1.24
LINC00254-201ENST00000563416 TOX2Q96NM4 488 aa7.29□□□□□ -1.24
LINC00254-201ENST00000563416 AP5M1Q9H0R1 490 aa7.29□□□□□ -1.24
LINC00254-201ENST00000563416 GPR27Q9NS67 375 aa7.29□□□□□ -1.24
LINC00254-201ENST00000563416 COA3Q9Y2R0 106 aaPredicted RBP7.29□□□□□ -1.24
LINC00254-201ENST00000563416 PCDHA2Q9Y5H9 948 aa7.29□□□□□ -1.24
LINC00254-201ENST00000563416 NPFFR2Q9Y5X5 522 aa7.29□□□□□ -1.24
LINC00254-201ENST00000563416 KDM2BQ8NHM5 1336 aa7.28□□□□□ -1.24
LINC00254-201ENST00000563416 RIMBP3CA6NJZ7 1639 aa7.28□□□□□ -1.24
LINC00254-201ENST00000563416 RIMBP3BA6NNM3 1639 aa7.28□□□□□ -1.24
LINC00254-201ENST00000563416 RIMBP3Q9UFD9 1639 aa7.28□□□□□ -1.24
LINC00254-201ENST00000563416 N4BP3O15049 544 aa7.28□□□□□ -1.24
LINC00254-201ENST00000563416 PPP1R11O60927 126 aaPredicted RBP7.28□□□□□ -1.24
LINC00254-201ENST00000563416 KRT1P04264 644 aa7.28□□□□□ -1.24
LINC00254-201ENST00000563416 BCL6P41182 706 aa7.28□□□□□ -1.24
LINC00254-201ENST00000563416 LSAMPQ13449 338 aa7.28□□□□□ -1.24
LINC00254-201ENST00000563416 KCNA10Q16322 511 aa7.28□□□□□ -1.24
LINC00254-201ENST00000563416 LONRF2Q1L5Z9 754 aa7.28□□□□□ -1.24
LINC00254-201ENST00000563416 ZC3H12BQ5HYM0 836 aaKnown RBP7.28□□□□□ -1.24
LINC00254-201ENST00000563416 DENND5AQ6IQ26 1287 aa7.28□□□□□ -1.24
LINC00254-201ENST00000563416 SCUBE1Q8IWY4 988 aa7.28□□□□□ -1.24
LINC00254-201ENST00000563416 ZBTB38Q8NAP3 1195 aaPredicted RBP7.28□□□□□ -1.24
LINC00254-201ENST00000563416 PLEKHO2Q8TD55 490 aa7.28□□□□□ -1.24
LINC00254-201ENST00000563416 DCAF4Q8WV16 495 aa7.28□□□□□ -1.24
LINC00254-201ENST00000563416 SGPP1Q9BX95 441 aa7.28□□□□□ -1.24
LINC00254-201ENST00000563416 CNTD2Q9H8S5 307 aa7.28□□□□□ -1.24
LINC00254-201ENST00000563416 GCM1Q9NP62 436 aa7.28□□□□□ -1.24
LINC00254-201ENST00000563416 CD320Q9NPF0 282 aa7.28□□□□□ -1.24
LINC00254-201ENST00000563416 SMG5Q9UPR3 1016 aaKnown RBP7.28□□□□□ -1.24
LINC00254-201ENST00000563416 H7BY64 318 aa7.27□□□□□ -1.25
LINC00254-201ENST00000563416 RFXAPO00287 272 aa7.27□□□□□ -1.25
LINC00254-201ENST00000563416 NTRK1P04629 796 aa7.27□□□□□ -1.25
LINC00254-201ENST00000563416 PFKLP17858 780 aa7.27□□□□□ -1.25
LINC00254-201ENST00000563416 PRR5P85299 388 aa7.27□□□□□ -1.25
LINC00254-201ENST00000563416 ZNF200P98182 395 aaPredicted RBP7.27□□□□□ -1.25
LINC00254-201ENST00000563416 TARBP2Q15633 366 aaKnown RBP7.27□□□□□ -1.25
LINC00254-201ENST00000563416 LDHDQ86WU2 507 aa7.27□□□□□ -1.25
LINC00254-201ENST00000563416 RIOX2Q8IUF8 465 aa7.27□□□□□ -1.25
LINC00254-201ENST00000563416 Q8N1Y9 231 aa7.27□□□□□ -1.25
LINC00254-201ENST00000563416 MZB1Q8WU39 189 aa7.27□□□□□ -1.25
LINC00254-201ENST00000563416 OSBP2Q969R2 916 aa7.27□□□□□ -1.25
LINC00254-201ENST00000563416 TSPAN17Q96FV3 270 aa7.27□□□□□ -1.25
LINC00254-201ENST00000563416 SIGLEC10Q96LC7 697 aa7.27□□□□□ -1.25
LINC00254-201ENST00000563416 ZFYVE21Q9BQ24 234 aa7.27□□□□□ -1.25
LINC00254-201ENST00000563416 FBLN5Q9UBX5 448 aa7.27□□□□□ -1.25
LINC00254-201ENST00000563416 CNOT6Q9ULM6 557 aaKnown RBP7.27□□□□□ -1.25
LINC00254-201ENST00000563416 IRAK3Q9Y616 596 aa7.27□□□□□ -1.25
LINC00254-201ENST00000563416 X6R8D5 127 aa7.27□□□□□ -1.25
LINC00254-201ENST00000563416 CEP170Q5SW79 1584 aa7.26□□□□□ -1.25
LINC00254-201ENST00000563416 GRIN2AQ12879 1464 aa7.26□□□□□ -1.25
LINC00254-201ENST00000563416 FAM221BA6H8Z2 402 aa7.26□□□□□ -1.25
LINC00254-201ENST00000563416 NPIPB6E9PJ23 425 aa7.26□□□□□ -1.25
LINC00254-201ENST00000563416 ARNTLO00327 626 aa7.26□□□□□ -1.25
LINC00254-201ENST00000563416 ADCY3O60266 1144 aa7.26□□□□□ -1.25
LINC00254-201ENST00000563416 DIAPH1O60610 1272 aaKnown RBP7.26□□□□□ -1.25
LINC00254-201ENST00000563416 LCP1P13796 627 aa7.26□□□□□ -1.25
LINC00254-201ENST00000563416 FPR2P25090 351 aa7.26□□□□□ -1.25
LINC00254-201ENST00000563416 CDR1P51861 262 aa7.26□□□□□ -1.25
LINC00254-201ENST00000563416 SUMO1P63165 101 aaKnown RBP7.26□□□□□ -1.25
LINC00254-201ENST00000563416 CHRNA2Q15822 529 aa7.26□□□□□ -1.25
LINC00254-201ENST00000563416 YOD1Q5VVQ6 348 aaPredicted RBP7.26□□□□□ -1.25
LINC00254-201ENST00000563416 ZSCAN18Q8TBC5 510 aaPredicted RBP7.26□□□□□ -1.25
LINC00254-201ENST00000563416 SEC14L1Q92503 715 aa7.26□□□□□ -1.25
LINC00254-201ENST00000563416 ALG3Q92685 438 aa7.26□□□□□ -1.25
LINC00254-201ENST00000563416 PHF20Q9BVI0 1012 aa7.26□□□□□ -1.25
LINC00254-201ENST00000563416 KRTAP9-2Q9BYQ4 174 aa7.26□□□□□ -1.25
LINC00254-201ENST00000563416 CLDND1Q9NY35 253 aa7.26□□□□□ -1.25
LINC00254-201ENST00000563416 SHROOM2Q13796 1616 aa7.26□□□□□ -1.25
LINC00254-201ENST00000563416 TRBV23-1A0A0A0MS06 115 aa7.25□□□□□ -1.25
LINC00254-201ENST00000563416 SLC6A11P48066 632 aa7.25□□□□□ -1.25
LINC00254-201ENST00000563416 LINC00310P59036 64 aa7.25□□□□□ -1.25
LINC00254-201ENST00000563416 ZNF385BQ569K4 471 aa7.25□□□□□ -1.25
LINC00254-201ENST00000563416 STYK1Q6J9G0 422 aa7.25□□□□□ -1.25
LINC00254-201ENST00000563416 MRFAP1L1Q96HT8 127 aa7.25□□□□□ -1.25
LINC00254-201ENST00000563416 DNAJC7Q99615 494 aa7.25□□□□□ -1.25
LINC00254-201ENST00000563416 KRTAP4-12Q9BQ66 201 aa7.25□□□□□ -1.25
LINC00254-201ENST00000563416 RNF38Q9H0F5 515 aa7.25□□□□□ -1.25
LINC00254-201ENST00000563416 RXFP1Q9HBX9 757 aa7.25□□□□□ -1.25
LINC00254-201ENST00000563416 ARHGEF11O15085 1522 aa7.24□□□□□ -1.25
LINC00254-201ENST00000563416 RUSC2Q8N2Y8 1516 aa7.24□□□□□ -1.25
LINC00254-201ENST00000563416 BUB1BO60566 1050 aaPredicted RBP7.24□□□□□ -1.25
LINC00254-201ENST00000563416 DGKIO75912 1065 aa7.24□□□□□ -1.25
LINC00254-201ENST00000563416 NCAM1P13591 858 aa7.24□□□□□ -1.25
LINC00254-201ENST00000563416 EPHB3P54753 998 aa7.24□□□□□ -1.25
LINC00254-201ENST00000563416 KIZQ2M2Z5 673 aa7.24□□□□□ -1.25
LINC00254-201ENST00000563416 CIAPIN1Q6FI81 312 aa7.24□□□□□ -1.25
LINC00254-201ENST00000563416 NLRP10Q86W26 655 aa7.24□□□□□ -1.25
LINC00254-201ENST00000563416 EPB41L1Q9H4G0 881 aa7.24□□□□□ -1.25
LINC00254-201ENST00000563416 CDK11AQ9UQ88 783 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms