RNA–Protein interactions for RNA: ENST00000563275.1

PKM-208, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 699 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-208ENST00000563275 RNF20Q5VTR2 975 aa14.54□□□□□ -0.08
PKM-208ENST00000563275 AFG1LQ8WV93 481 aa14.54□□□□□ -0.08
PKM-208ENST00000563275 KAT2BQ92831 832 aa14.54□□□□□ -0.08
PKM-208ENST00000563275 RNPC3Q96LT9 517 aaKnown RBP14.54□□□□□ -0.08
PKM-208ENST00000563275 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.54□□□□□ -0.085e-44■□□□□ 10.3
PKM-208ENST00000563275 WNT8AQ9H1J5 351 aa14.54□□□□□ -0.08
PKM-208ENST00000563275 HIPK3Q9H422 1215 aa14.54□□□□□ -0.08
PKM-208ENST00000563275 UMODL1Q5DID0 1318 aa14.54□□□□□ -0.08
PKM-208ENST00000563275 MYL3P08590 195 aa14.53□□□□□ -0.08
PKM-208ENST00000563275 CALM1P0DP23 149 aa14.53□□□□□ -0.08
PKM-208ENST00000563275 CALM2P0DP24 149 aa14.53□□□□□ -0.08
PKM-208ENST00000563275 CALM3P0DP25 149 aa14.53□□□□□ -0.08
PKM-208ENST00000563275 CYP2C18P33260 490 aa14.53□□□□□ -0.08
PKM-208ENST00000563275 PTPN11Q06124 597 aaPredicted RBP14.53□□□□□ -0.08
PKM-208ENST00000563275 PPIGQ13427 754 aaKnown RBP eCLIP14.53□□□□□ -0.083e-15■■□□□ 11.4
PKM-208ENST00000563275 NBPF20Q3BBV1 942 aa14.53□□□□□ -0.08
PKM-208ENST00000563275 ADCK5Q3MIX3 580 aa14.53□□□□□ -0.08
PKM-208ENST00000563275 TMTC3Q6ZXV5 915 aa14.53□□□□□ -0.08
PKM-208ENST00000563275 SESTD1Q86VW0 696 aa14.53□□□□□ -0.08
PKM-208ENST00000563275 TMEM199Q8N511 208 aa14.53□□□□□ -0.08
PKM-208ENST00000563275 CCDC136Q96JN2 1154 aa14.53□□□□□ -0.08
PKM-208ENST00000563275 GUCD1Q96NT3 240 aa14.53□□□□□ -0.08
PKM-208ENST00000563275 NEK1Q96PY6 1258 aa14.53□□□□□ -0.08
PKM-208ENST00000563275 CTAGE1Q96RT6 745 aa14.53□□□□□ -0.08
PKM-208ENST00000563275 LRRC2Q9BYS8 371 aa14.53□□□□□ -0.08
PKM-208ENST00000563275 PPP1R12CQ9BZL4 782 aa14.53□□□□□ -0.08
PKM-208ENST00000563275 TRMT13Q9NUP7 481 aaKnown RBP14.53□□□□□ -0.08
PKM-208ENST00000563275 STXBP5LQ9Y2K9 1186 aa14.53□□□□□ -0.08
PKM-208ENST00000563275 CCDC69A6NI79 296 aa14.52□□□□□ -0.09
PKM-208ENST00000563275 MEIS2O14770 477 aa14.52□□□□□ -0.09
PKM-208ENST00000563275 RXRAP19793 462 aa14.52□□□□□ -0.09
PKM-208ENST00000563275 DHX32Q7L7V1 743 aaKnown RBP14.52□□□□□ -0.09
PKM-208ENST00000563275 FANCBQ8NB91 859 aa14.52□□□□□ -0.09
PKM-208ENST00000563275 PPTC7Q8NI37 304 aa14.52□□□□□ -0.09
PKM-208ENST00000563275 RRP36Q96EU6 259 aaKnown RBP14.52□□□□□ -0.09
PKM-208ENST00000563275 INPP4AQ96PE3 977 aaPredicted RBP14.52□□□□□ -0.09
PKM-208ENST00000563275 IL23AQ9NPF7 189 aa14.52□□□□□ -0.09
PKM-208ENST00000563275 SLC12A7Q9Y666 1083 aa14.52□□□□□ -0.09
PKM-208ENST00000563275 TMEM265A0A087WTH1 108 aa14.51□□□□□ -0.09
PKM-208ENST00000563275 F2P00734 622 aa14.51□□□□□ -0.09
PKM-208ENST00000563275 SUPT20HL2P0C7V6 817 aa14.51□□□□□ -0.09
PKM-208ENST00000563275 TGFB3P10600 412 aa14.51□□□□□ -0.09
PKM-208ENST00000563275 ICAM3P32942 547 aa14.51□□□□□ -0.09
PKM-208ENST00000563275 MRPS9P82933 396 aaKnown RBP14.51□□□□□ -0.09
PKM-208ENST00000563275 FUT2Q10981 343 aa14.51□□□□□ -0.09
PKM-208ENST00000563275 LAMC2Q13753 1193 aa14.51□□□□□ -0.09
PKM-208ENST00000563275 CELF3Q5SZQ8 465 aaKnown RBP14.51□□□□□ -0.09
PKM-208ENST00000563275 MYSM1Q5VVJ2 828 aa14.51□□□□□ -0.09
PKM-208ENST00000563275 PSRC1Q6PGN9 363 aaPredicted RBP14.51□□□□□ -0.09
PKM-208ENST00000563275 KCNV1Q6PIU1 500 aa14.51□□□□□ -0.09
PKM-208ENST00000563275 APOA5Q6Q788 366 aa14.51□□□□□ -0.09
PKM-208ENST00000563275 NFXL1Q6ZNB6 911 aa14.51□□□□□ -0.09
PKM-208ENST00000563275 HERVK_113Q902F9 699 aa14.51□□□□□ -0.09
PKM-208ENST00000563275 BRPF3Q9ULD4 1205 aa14.51□□□□□ -0.09
PKM-208ENST00000563275 MRVI1Q9Y6F6 885 aa14.51□□□□□ -0.09
PKM-208ENST00000563275 HAS3O00219 553 aa14.5□□□□□ -0.09
PKM-208ENST00000563275 STAM2O75886 525 aa14.5□□□□□ -0.09
PKM-208ENST00000563275 ACRP10323 421 aa14.5□□□□□ -0.09
PKM-208ENST00000563275 CYP2C9P11712 490 aa14.5□□□□□ -0.09
PKM-208ENST00000563275 UBA1P22314 1058 aaKnown RBP14.5□□□□□ -0.09
PKM-208ENST00000563275 CCND2P30279 289 aa14.5□□□□□ -0.09
PKM-208ENST00000563275 SP2Q02086 613 aa14.5□□□□□ -0.09
PKM-208ENST00000563275 SEMA3FQ13275 785 aa14.5□□□□□ -0.09
PKM-208ENST00000563275 KRT32Q14532 448 aa14.5□□□□□ -0.09
PKM-208ENST00000563275 DGKDQ16760 1214 aa14.5□□□□□ -0.09
PKM-208ENST00000563275 ZNF365Q70YC5 407 aa14.5□□□□□ -0.09
PKM-208ENST00000563275 FCHSD1Q86WN1 690 aa14.5□□□□□ -0.09
PKM-208ENST00000563275 CMTR1Q8N1G2 835 aaKnown RBP14.5□□□□□ -0.09
PKM-208ENST00000563275 PIBF1Q8WXW3 757 aa14.5□□□□□ -0.09
PKM-208ENST00000563275 GPKOWQ92917 476 aaPredicted RBP eCLIP14.5□□□□□ -0.09
PKM-208ENST00000563275 TTYH1Q9H313 450 aaPredicted RBP14.5□□□□□ -0.09
PKM-208ENST00000563275 CHD9Q3L8U1 2897 aa14.5□□□□□ -0.09
PKM-208ENST00000563275 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.49□□□□□ -0.09
PKM-208ENST00000563275 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.49□□□□□ -0.09
PKM-208ENST00000563275 SPATA31C2B4DYI2 1134 aa14.49□□□□□ -0.09
PKM-208ENST00000563275 PITPNM1O00562 1244 aa14.49□□□□□ -0.09
PKM-208ENST00000563275 MYCLP12524 364 aaPredicted RBP14.49□□□□□ -0.09
PKM-208ENST00000563275 CASTP20810 708 aaKnown RBP14.49□□□□□ -0.09
PKM-208ENST00000563275 HSPA4P34932 840 aa14.49□□□□□ -0.09
PKM-208ENST00000563275 RCAN1P53805 252 aa14.49□□□□□ -0.09
PKM-208ENST00000563275 CCL23P55773 120 aa14.49□□□□□ -0.09
PKM-208ENST00000563275 RBL2Q08999 1139 aa14.49□□□□□ -0.09
PKM-208ENST00000563275 ZNF697Q5TEC3 545 aa14.49□□□□□ -0.09
PKM-208ENST00000563275 XRRA1Q6P2D8 792 aa14.49□□□□□ -0.09
PKM-208ENST00000563275 USP17L6PQ6QN14 398 aa14.49□□□□□ -0.09
PKM-208ENST00000563275 MICU3Q86XE3 530 aa14.49□□□□□ -0.09
PKM-208ENST00000563275 RAB11FIP4Q86YS3 637 aa14.49□□□□□ -0.09
PKM-208ENST00000563275 FBXL16Q8N461 479 aa14.49□□□□□ -0.09
PKM-208ENST00000563275 PPP1R13LQ8WUF5 828 aa14.49□□□□□ -0.09
PKM-208ENST00000563275 TCEANC2Q96MN5 208 aa14.49□□□□□ -0.09
PKM-208ENST00000563275 SEMA6BQ9H3T3 888 aa14.49□□□□□ -0.09
PKM-208ENST00000563275 FAM217BQ9NTX9 383 aaPredicted RBP14.49□□□□□ -0.09
PKM-208ENST00000563275 SEC63Q9UGP8 760 aaKnown RBP14.49□□□□□ -0.09
PKM-208ENST00000563275 CNTNAP5Q8WYK1 1306 aa14.48□□□□□ -0.09
PKM-208ENST00000563275 PPFIA4O75335 1185 aa14.48□□□□□ -0.09
PKM-208ENST00000563275 HMGB1P09429 215 aaKnown RBP14.48□□□□□ -0.09
PKM-208ENST00000563275 HSDL1Q3SXM5 330 aa14.48□□□□□ -0.09
PKM-208ENST00000563275 PCNX4Q63HM2 1172 aa14.48□□□□□ -0.09
PKM-208ENST00000563275 TEX2Q8IWB9 1127 aa14.48□□□□□ -0.09
PKM-208ENST00000563275 DHX37Q8IY37 1157 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms