RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 PDE8AO60658 829 aa8.04□□□□□ -1.12
LINC00557-201ENST00000563184 RAC2P15153 192 aa8.04□□□□□ -1.12
LINC00557-201ENST00000563184 POU3F2P20265 443 aaPredicted RBP8.04□□□□□ -1.12
LINC00557-201ENST00000563184 RNF187Q5TA31 235 aaPredicted RBP8.04□□□□□ -1.12
LINC00557-201ENST00000563184 LZTR1Q8N653 840 aa8.04□□□□□ -1.12
LINC00557-201ENST00000563184 TMEM169Q96HH4 297 aa8.04□□□□□ -1.12
LINC00557-201ENST00000563184 JAM3Q9BX67 310 aa8.04□□□□□ -1.12
LINC00557-201ENST00000563184 MTFR1LQ9H019 292 aa8.04□□□□□ -1.12
LINC00557-201ENST00000563184 RNF32Q9H0A6 362 aa8.04□□□□□ -1.12
LINC00557-201ENST00000563184 SPC25Q9HBM1 224 aa8.04□□□□□ -1.12
LINC00557-201ENST00000563184 C22orf46C9J442 243 aa8.03□□□□□ -1.12
LINC00557-201ENST00000563184 SRGAP2CP0DJJ0 459 aa8.03□□□□□ -1.12
LINC00557-201ENST00000563184 STAT3P40763 770 aa8.03□□□□□ -1.12
LINC00557-201ENST00000563184 SNX17Q15036 470 aa8.03□□□□□ -1.12
LINC00557-201ENST00000563184 ZCCHC8Q6NZY4 707 aaKnown RBP8.03□□□□□ -1.12
LINC00557-201ENST00000563184 KRT26Q7Z3Y9 468 aa8.03□□□□□ -1.12
LINC00557-201ENST00000563184 RNF180Q86T96 592 aa8.03□□□□□ -1.12
LINC00557-201ENST00000563184 SIRT2Q8IXJ6 389 aa8.03□□□□□ -1.12
LINC00557-201ENST00000563184 ABHD4Q8TB40 342 aa8.03□□□□□ -1.12
LINC00557-201ENST00000563184 TRMT2BQ96GJ1 504 aaKnown RBP8.03□□□□□ -1.12
LINC00557-201ENST00000563184 FMNL2Q96PY5 1086 aa8.03□□□□□ -1.12
LINC00557-201ENST00000563184 KRTAP9-2Q9BYQ4 174 aa8.03□□□□□ -1.12
LINC00557-201ENST00000563184 COQ6Q9Y2Z9 468 aa8.03□□□□□ -1.12
LINC00557-201ENST00000563184 FAM47E-STBD1D6RA91 191 aa8.02□□□□□ -1.13
LINC00557-201ENST00000563184 JMJD7P0C870 316 aa8.02□□□□□ -1.13
LINC00557-201ENST00000563184 GLI4P10075 376 aa8.02□□□□□ -1.13
LINC00557-201ENST00000563184 PNLIPP16233 465 aa8.02□□□□□ -1.13
LINC00557-201ENST00000563184 CYP4F8P98187 520 aa8.02□□□□□ -1.13
LINC00557-201ENST00000563184 PCBP1Q15365 356 aaKnown RBP eCLIP8.02□□□□□ -1.13
LINC00557-201ENST00000563184 RIOX2Q8IUF8 465 aa8.02□□□□□ -1.13
LINC00557-201ENST00000563184 ZC3H7AQ8IWR0 971 aaKnown RBP8.02□□□□□ -1.13
LINC00557-201ENST00000563184 TMX1Q9H3N1 280 aa8.02□□□□□ -1.13
LINC00557-201ENST00000563184 TNFRSF12AQ9NP84 129 aa8.02□□□□□ -1.13
LINC00557-201ENST00000563184 CRTAC1Q9NQ79 661 aa8.02□□□□□ -1.13
LINC00557-201ENST00000563184 A0A1W2PQ27 194 aa8.01□□□□□ -1.13
LINC00557-201ENST00000563184 A0A1W2PQ64 194 aa8.01□□□□□ -1.13
LINC00557-201ENST00000563184 A0A1W2PQC6 194 aa8.01□□□□□ -1.13
LINC00557-201ENST00000563184 A0A1W2PQD8 194 aa8.01□□□□□ -1.13
LINC00557-201ENST00000563184 GLRX3O76003 335 aaKnown RBP8.01□□□□□ -1.13
LINC00557-201ENST00000563184 PYGMP11217 842 aa8.01□□□□□ -1.13
LINC00557-201ENST00000563184 AFMP43652 599 aa8.01□□□□□ -1.13
LINC00557-201ENST00000563184 CDCA2Q69YH5 1023 aaPredicted RBP8.01□□□□□ -1.13
LINC00557-201ENST00000563184 ATG4DQ86TL0 474 aaPredicted RBP8.01□□□□□ -1.13
LINC00557-201ENST00000563184 IGSF22Q8N9C0 903 aa8.01□□□□□ -1.13
LINC00557-201ENST00000563184 FBXW5Q969U6 566 aa8.01□□□□□ -1.13
LINC00557-201ENST00000563184 KCNJ15Q99712 375 aa8.01□□□□□ -1.13
LINC00557-201ENST00000563184 FAM126AQ9BYI3 521 aaPredicted RBP8.01□□□□□ -1.13
LINC00557-201ENST00000563184 CELF4Q9BZC1 486 aaKnown RBP8.01□□□□□ -1.13
LINC00557-201ENST00000563184 CBLCQ9ULV8 474 aa8.01□□□□□ -1.13
LINC00557-201ENST00000563184 B4E1Z4 1266 aa8□□□□□ -1.13
LINC00557-201ENST00000563184 NTRK1P04629 796 aa8□□□□□ -1.13
LINC00557-201ENST00000563184 POU3F3P20264 500 aaPredicted RBP8□□□□□ -1.13
LINC00557-201ENST00000563184 HABP4Q5JVS0 413 aaKnown RBP8□□□□□ -1.13
LINC00557-201ENST00000563184 WWC2Q6AWC2 1192 aa8□□□□□ -1.13
LINC00557-201ENST00000563184 PKN3Q6P5Z2 889 aa8□□□□□ -1.13
LINC00557-201ENST00000563184 C16orf59Q7L2K0 433 aa8□□□□□ -1.13
LINC00557-201ENST00000563184 UBR7Q8N806 425 aa8□□□□□ -1.13
LINC00557-201ENST00000563184 USP33Q8TEY7 942 aa8□□□□□ -1.13
LINC00557-201ENST00000563184 KIRREL1Q96J84 757 aa8□□□□□ -1.13
LINC00557-201ENST00000563184 EPB41L1Q9H4G0 881 aa8□□□□□ -1.13
LINC00557-201ENST00000563184 CAAP1Q9H8G2 361 aa8□□□□□ -1.13
LINC00557-201ENST00000563184 SAMD15Q9P1V8 674 aa8□□□□□ -1.13
LINC00557-201ENST00000563184 MAPRE3Q9UPY8 281 aa8□□□□□ -1.13
LINC00557-201ENST00000563184 YBX2Q9Y2T7 364 aaKnown RBP8□□□□□ -1.13
LINC00557-201ENST00000563184 CCDC66A2RUB6 948 aa7.99□□□□□ -1.13
LINC00557-201ENST00000563184 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.99□□□□□ -1.13
LINC00557-201ENST00000563184 KPNA6O60684 536 aa7.99□□□□□ -1.13
LINC00557-201ENST00000563184 DBHP09172 617 aa7.99□□□□□ -1.13
LINC00557-201ENST00000563184 AMPD3Q01432 767 aa7.99□□□□□ -1.13
LINC00557-201ENST00000563184 SEPT7Q16181 437 aaKnown RBP7.99□□□□□ -1.13
LINC00557-201ENST00000563184 PTPROQ16827 1216 aa7.99□□□□□ -1.13
LINC00557-201ENST00000563184 CFAP100Q494V2 611 aa7.99□□□□□ -1.13
LINC00557-201ENST00000563184 MROH9Q5TGP6 573 aa7.99□□□□□ -1.13
LINC00557-201ENST00000563184 PIK3R6Q5UE93 754 aa7.99□□□□□ -1.13
LINC00557-201ENST00000563184 BICRALQ6AI39 1079 aa7.99□□□□□ -1.13
LINC00557-201ENST00000563184 OVCH1Q7RTY7 1134 aa7.99□□□□□ -1.13
LINC00557-201ENST00000563184 PPM1KQ8N3J5 372 aa7.99□□□□□ -1.13
LINC00557-201ENST00000563184 CHAC2Q8WUX2 184 aa7.99□□□□□ -1.13
LINC00557-201ENST00000563184 TCRBV5S4A2TA0A5A2 114 aa7.98□□□□□ -1.13
LINC00557-201ENST00000563184 CBX4O00257 560 aa7.98□□□□□ -1.13
LINC00557-201ENST00000563184 SRGAP3O43295 1099 aa7.98□□□□□ -1.13
LINC00557-201ENST00000563184 NPTXRO95502 500 aa7.98□□□□□ -1.13
LINC00557-201ENST00000563184 COL6A2P12110 1019 aa7.98□□□□□ -1.13
LINC00557-201ENST00000563184 NCLP19338 710 aaKnown RBP7.98□□□□□ -1.13
LINC00557-201ENST00000563184 SDHBP21912 280 aa7.98□□□□□ -1.13
LINC00557-201ENST00000563184 TXKP42681 527 aa7.98□□□□□ -1.13
LINC00557-201ENST00000563184 DNM2P50570 870 aa7.98□□□□□ -1.13
LINC00557-201ENST00000563184 MECP2P51608 486 aaKnown RBP7.98□□□□□ -1.13
LINC00557-201ENST00000563184 NEK4P51957 841 aa7.98□□□□□ -1.13
LINC00557-201ENST00000563184 ERVFRD-1P60508 538 aa7.98□□□□□ -1.13
LINC00557-201ENST00000563184 RBM10P98175 930 aaKnown RBP7.98□□□□□ -1.13
LINC00557-201ENST00000563184 TMEM177Q53S58 311 aa7.98□□□□□ -1.13
LINC00557-201ENST00000563184 OTOP3Q7RTS5 596 aa7.98□□□□□ -1.13
LINC00557-201ENST00000563184 DDX53Q86TM3 631 aaKnown RBP7.98□□□□□ -1.13
LINC00557-201ENST00000563184 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.98□□□□□ -1.13
LINC00557-201ENST00000563184 ORAI3Q9BRQ5 295 aa7.98□□□□□ -1.13
LINC00557-201ENST00000563184 COA3Q9Y2R0 106 aaPredicted RBP7.98□□□□□ -1.13
LINC00557-201ENST00000563184 COL4A3BPQ9Y5P4 624 aa7.98□□□□□ -1.13
LINC00557-201ENST00000563184 ZNF561-AS1K7EIQ3 104 aa7.97□□□□□ -1.13
LINC00557-201ENST00000563184 M0R2C6 588 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms