RNA–Protein interactions for RNA: ENST00000561896.1

MSLN-203, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-203ENST00000561896 SRBD1Q8N5C6 995 aaKnown RBP29.39■■■□□ 2.3
MSLN-203ENST00000561896 FANCBQ8NB91 859 aa29.39■■■□□ 2.3
MSLN-203ENST00000561896 RNPC3Q96LT9 517 aaKnown RBP29.39■■■□□ 2.3
MSLN-203ENST00000561896 TRPV6Q9H1D0 765 aa29.39■■■□□ 2.3
MSLN-203ENST00000561896 HIPK3Q9H422 1215 aa29.39■■■□□ 2.3
MSLN-203ENST00000561896 MRVI1Q9Y6F6 885 aa29.39■■■□□ 2.3
MSLN-203ENST00000561896 FRMPD4Q14CM0 1322 aa29.39■■■□□ 2.3
MSLN-203ENST00000561896 MMP3P08254 477 aa29.38■■■□□ 2.29
MSLN-203ENST00000561896 TGFB3P10600 412 aa29.38■■■□□ 2.29
MSLN-203ENST00000561896 AFG1LQ8WV93 481 aa29.38■■■□□ 2.29
MSLN-203ENST00000561896 NOC4LQ9BVI4 516 aaKnown RBP29.38■■■□□ 2.29
MSLN-203ENST00000561896 PPP1R12CQ9BZL4 782 aa29.38■■■□□ 2.29
MSLN-203ENST00000561896 PIK3CDO00329 1044 aa29.37■■■□□ 2.29
MSLN-203ENST00000561896 STAM2O75886 525 aa29.37■■■□□ 2.29
MSLN-203ENST00000561896 RGS20O76081 388 aa29.37■■■□□ 2.29
MSLN-203ENST00000561896 PLEKHA8P1O95397 391 aa29.37■■■□□ 2.29
MSLN-203ENST00000561896 NEFLP07196 543 aa29.37■■■□□ 2.29
MSLN-203ENST00000561896 HMGB1P09429 215 aaKnown RBP29.37■■■□□ 2.29
MSLN-203ENST00000561896 CCND2P30279 289 aa29.37■■■□□ 2.29
MSLN-203ENST00000561896 LAMC2Q13753 1193 aa29.37■■■□□ 2.29
MSLN-203ENST00000561896 SYNE3Q6ZMZ3 975 aa29.37■■■□□ 2.29
MSLN-203ENST00000561896 RASEFQ8IZ41 740 aa29.37■■■□□ 2.29
MSLN-203ENST00000561896 LRRC2Q9BYS8 371 aa29.37■■■□□ 2.29
MSLN-203ENST00000561896 MYCLP12524 364 aaPredicted RBP29.36■■■□□ 2.29
MSLN-203ENST00000561896 CSF2RAP15509 400 aa29.36■■■□□ 2.29
MSLN-203ENST00000561896 CASTP20810 708 aaKnown RBP29.36■■■□□ 2.29
MSLN-203ENST00000561896 NBPF20Q3BBV1 942 aa29.36■■■□□ 2.29
MSLN-203ENST00000561896 FCHSD1Q86WN1 690 aa29.36■■■□□ 2.29
MSLN-203ENST00000561896 KCNB2Q92953 911 aa29.36■■■□□ 2.29
MSLN-203ENST00000561896 MTMR10Q9NXD2 777 aa29.36■■■□□ 2.29
MSLN-203ENST00000561896 CYP2C18P33260 490 aa29.35■■■□□ 2.29
MSLN-203ENST00000561896 DGKDQ16760 1214 aa29.35■■■□□ 2.29
MSLN-203ENST00000561896 PSRC1Q6PGN9 363 aaPredicted RBP29.35■■■□□ 2.29
MSLN-203ENST00000561896 TMTC3Q6ZXV5 915 aa29.35■■■□□ 2.29
MSLN-203ENST00000561896 Q7L0L9 218 aa29.35■■■□□ 2.29
MSLN-203ENST00000561896 PPTC7Q8NI37 304 aa29.35■■■□□ 2.29
MSLN-203ENST00000561896 PIBF1Q8WXW3 757 aa29.35■■■□□ 2.29
MSLN-203ENST00000561896 COL6A3P12111 3177 aa29.34■■■□□ 2.29
MSLN-203ENST00000561896 RXRAP19793 462 aa29.34■■■□□ 2.29
MSLN-203ENST00000561896 TMEM240Q5SV17 173 aa29.34■■■□□ 2.29
MSLN-203ENST00000561896 APOA5Q6Q788 366 aa29.34■■■□□ 2.29
MSLN-203ENST00000561896 C16orf59Q7L2K0 433 aa29.34■■■□□ 2.29
MSLN-203ENST00000561896 SESTD1Q86VW0 696 aa29.34■■■□□ 2.29
MSLN-203ENST00000561896 IL31RAQ8NI17 732 aa29.34■■■□□ 2.29
MSLN-203ENST00000561896 CUL5Q93034 780 aa29.34■■■□□ 2.29
MSLN-203ENST00000561896 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.34■■■□□ 2.29
MSLN-203ENST00000561896 IL23AQ9NPF7 189 aa29.34■■■□□ 2.29
MSLN-203ENST00000561896 TRMT13Q9NUP7 481 aaKnown RBP29.34■■■□□ 2.29
MSLN-203ENST00000561896 RBM28Q9NW13 759 aaKnown RBP29.34■■■□□ 2.29
MSLN-203ENST00000561896 HOXD8P13378 290 aaPredicted RBP29.33■■■□□ 2.29
MSLN-203ENST00000561896 RCAN1P53805 252 aa29.33■■■□□ 2.29
MSLN-203ENST00000561896 ADCK5Q3MIX3 580 aa29.33■■■□□ 2.29
MSLN-203ENST00000561896 RASIP1Q5U651 963 aa29.33■■■□□ 2.29
MSLN-203ENST00000561896 XRRA1Q6P2D8 792 aa29.33■■■□□ 2.29
MSLN-203ENST00000561896 MICU3Q86XE3 530 aa29.33■■■□□ 2.29
MSLN-203ENST00000561896 DHX37Q8IY37 1157 aaKnown RBP29.33■■■□□ 2.29
MSLN-203ENST00000561896 MEIS2O14770 477 aa29.32■■■□□ 2.28
MSLN-203ENST00000561896 MYSM1Q5VVJ2 828 aa29.32■■■□□ 2.28
MSLN-203ENST00000561896 TEX2Q8IWB9 1127 aa29.32■■■□□ 2.28
MSLN-203ENST00000561896 SMARCC2Q8TAQ2 1214 aa29.32■■■□□ 2.28
MSLN-203ENST00000561896 UMODL1Q5DID0 1318 aa29.31■■■□□ 2.28
MSLN-203ENST00000561896 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.31■■■□□ 2.28
MSLN-203ENST00000561896 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.31■■■□□ 2.28
MSLN-203ENST00000561896 ICAM3P32942 547 aa29.31■■■□□ 2.28
MSLN-203ENST00000561896 HSPA4P34932 840 aa29.31■■■□□ 2.28
MSLN-203ENST00000561896 GNPTABQ3T906 1256 aa29.31■■■□□ 2.28
MSLN-203ENST00000561896 FAM47CQ5HY64 1035 aa29.31■■■□□ 2.28
MSLN-203ENST00000561896 CELF3Q5SZQ8 465 aaKnown RBP29.31■■■□□ 2.28
MSLN-203ENST00000561896 ZNF697Q5TEC3 545 aa29.31■■■□□ 2.28
MSLN-203ENST00000561896 CMTR1Q8N1G2 835 aaKnown RBP29.31■■■□□ 2.28
MSLN-203ENST00000561896 KAT2BQ92831 832 aa29.31■■■□□ 2.28
MSLN-203ENST00000561896 INPP4AQ96PE3 977 aaPredicted RBP29.31■■■□□ 2.28
MSLN-203ENST00000561896 TMEM265A0A087WTH1 108 aa29.3■■■□□ 2.28
MSLN-203ENST00000561896 EPB41L2O43491 1005 aaKnown RBP29.3■■■□□ 2.28
MSLN-203ENST00000561896 PPFIA4O75335 1185 aa29.3■■■□□ 2.28
MSLN-203ENST00000561896 REC8O95072 547 aa29.3■■■□□ 2.28
MSLN-203ENST00000561896 KATNAL1Q9BW62 490 aa29.3■■■□□ 2.28
MSLN-203ENST00000561896 WNT8AQ9H1J5 351 aa29.3■■■□□ 2.28
MSLN-203ENST00000561896 STXBP5LQ9Y2K9 1186 aa29.3■■■□□ 2.28
MSLN-203ENST00000561896 PITPNM1O00562 1244 aa29.29■■■□□ 2.28
MSLN-203ENST00000561896 ZBTB43O43298 467 aa29.29■■■□□ 2.28
MSLN-203ENST00000561896 MRPS9P82933 396 aaKnown RBP29.29■■■□□ 2.28
MSLN-203ENST00000561896 PCNX4Q63HM2 1172 aa29.29■■■□□ 2.28
MSLN-203ENST00000561896 USP17L6PQ6QN14 398 aa29.29■■■□□ 2.28
MSLN-203ENST00000561896 ZNF365Q70YC5 407 aa29.29■■■□□ 2.28
MSLN-203ENST00000561896 RPUSD2Q8IZ73 545 aaKnown RBP29.29■■■□□ 2.28
MSLN-203ENST00000561896 PSTPIP2Q9H939 334 aa29.29■■■□□ 2.28
MSLN-203ENST00000561896 BRPF3Q9ULD4 1205 aa29.29■■■□□ 2.28
MSLN-203ENST00000561896 GGPS1O95749 300 aa29.28■■■□□ 2.28
MSLN-203ENST00000561896 F2P00734 622 aa29.28■■■□□ 2.28
MSLN-203ENST00000561896 CYP2C9P11712 490 aa29.28■■■□□ 2.28
MSLN-203ENST00000561896 UBA1P22314 1058 aaKnown RBP29.28■■■□□ 2.28
MSLN-203ENST00000561896 RTN1Q16799 776 aa29.28■■■□□ 2.28
MSLN-203ENST00000561896 RAB11FIP4Q86YS3 637 aa29.28■■■□□ 2.28
MSLN-203ENST00000561896 HERVK_113Q902F9 699 aa29.28■■■□□ 2.28
MSLN-203ENST00000561896 MTIF3Q9H2K0 278 aaKnown RBP29.28■■■□□ 2.28
MSLN-203ENST00000561896 PFKMP08237 780 aa29.27■■■□□ 2.28
MSLN-203ENST00000561896 ACRP10323 421 aa29.27■■■□□ 2.28
MSLN-203ENST00000561896 CCL23P55773 120 aa29.27■■■□□ 2.28
MSLN-203ENST00000561896 SP2Q02086 613 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms