RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 DDX41Q9UJV9 622 aaKnown RBP27.49■■□□□ 1.99
CDR2-202ENST00000561630 PIK3CDO00329 1044 aa27.48■■□□□ 1.99
CDR2-202ENST00000561630 KPNA6O60684 536 aa27.48■■□□□ 1.99
CDR2-202ENST00000561630 RGS20O76081 388 aa27.48■■□□□ 1.99
CDR2-202ENST00000561630 GH1P01241 217 aa27.48■■□□□ 1.99
CDR2-202ENST00000561630 MYL3P08590 195 aa27.48■■□□□ 1.99
CDR2-202ENST00000561630 PSMC6P62333 389 aa27.48■■□□□ 1.99
CDR2-202ENST00000561630 FGD1P98174 961 aa27.48■■□□□ 1.99
CDR2-202ENST00000561630 RTN1Q16799 776 aa27.48■■□□□ 1.99
CDR2-202ENST00000561630 LRIT3Q3SXY7 679 aa27.48■■□□□ 1.99
CDR2-202ENST00000561630 BLOC1S2Q6QNY1 142 aa27.48■■□□□ 1.99
CDR2-202ENST00000561630 MRVI1Q9Y6F6 885 aa27.48■■□□□ 1.99
CDR2-202ENST00000561630 FRMPD4Q14CM0 1322 aa27.47■■□□□ 1.99
CDR2-202ENST00000561630 LAMA2P24043 3122 aaKnown RBP27.47■■□□□ 1.99
CDR2-202ENST00000561630 hCG_1642624A0A1W2PR95 340 aa27.47■■□□□ 1.99
CDR2-202ENST00000561630 SOX1O00570 391 aaPredicted RBP27.47■■□□□ 1.99
CDR2-202ENST00000561630 MEIS2O14770 477 aa27.47■■□□□ 1.99
CDR2-202ENST00000561630 TLR3O15455 904 aaKnown RBP27.47■■□□□ 1.99
CDR2-202ENST00000561630 CD4P01730 458 aa27.47■■□□□ 1.99
CDR2-202ENST00000561630 PSMA5P28066 241 aa27.47■■□□□ 1.99
CDR2-202ENST00000561630 CCND2P30279 289 aa27.47■■□□□ 1.99
CDR2-202ENST00000561630 ARHGAP1Q07960 439 aa27.47■■□□□ 1.99
CDR2-202ENST00000561630 FUT2Q10981 343 aa27.47■■□□□ 1.99
CDR2-202ENST00000561630 USP17L6PQ6QN14 398 aa27.47■■□□□ 1.99
CDR2-202ENST00000561630 FBXL16Q8N461 479 aa27.47■■□□□ 1.99
CDR2-202ENST00000561630 CUL5Q93034 780 aa27.47■■□□□ 1.99
CDR2-202ENST00000561630 MTG1Q9BT17 334 aaPredicted RBP27.47■■□□□ 1.99
CDR2-202ENST00000561630 LTBP2Q14767 1821 aa27.46■■□□□ 1.99
CDR2-202ENST00000561630 GOLGA8AA7E2F4 631 aa27.46■■□□□ 1.99
CDR2-202ENST00000561630 GOLGA8BA8MQT2 603 aa27.46■■□□□ 1.99
CDR2-202ENST00000561630 TIMP1P01033 207 aa27.46■■□□□ 1.99
CDR2-202ENST00000561630 RPS6KB1P23443 525 aa27.46■■□□□ 1.99
CDR2-202ENST00000561630 KCNV1Q6PIU1 500 aa27.46■■□□□ 1.99
CDR2-202ENST00000561630 Q6ZUG5 572 aa27.46■■□□□ 1.99
CDR2-202ENST00000561630 SMARCC2Q8TAQ2 1214 aa27.46■■□□□ 1.99
CDR2-202ENST00000561630 AFG1LQ8WV93 481 aa27.46■■□□□ 1.99
CDR2-202ENST00000561630 USP26Q9BXU7 913 aa27.46■■□□□ 1.99
CDR2-202ENST00000561630 CNTNAP5Q8WYK1 1306 aa27.45■■□□□ 1.99
CDR2-202ENST00000561630 EMID1Q96A84 441 aaPredicted RBP27.45■■□□□ 1.98
CDR2-202ENST00000561630 PSTPIP2Q9H939 334 aa27.45■■□□□ 1.98
CDR2-202ENST00000561630 FAM217BQ9NTX9 383 aaPredicted RBP27.45■■□□□ 1.98
CDR2-202ENST00000561630 BRF1Q92994 677 aa27.44■■□□□ 1.98
CDR2-202ENST00000561630 AGXT2Q9BYV1 514 aa27.44■■□□□ 1.98
CDR2-202ENST00000561630 STAM2O75886 525 aa27.43■■□□□ 1.98
CDR2-202ENST00000561630 MMP3P08254 477 aa27.43■■□□□ 1.98
CDR2-202ENST00000561630 TGFB3P10600 412 aa27.43■■□□□ 1.98
CDR2-202ENST00000561630 CASTP20810 708 aaKnown RBP27.43■■□□□ 1.98
CDR2-202ENST00000561630 CDC27P30260 824 aa27.43■■□□□ 1.98
CDR2-202ENST00000561630 APOBRQ0VD83 1088 aa27.43■■□□□ 1.98
CDR2-202ENST00000561630 LAMC2Q13753 1193 aa27.43■■□□□ 1.98
CDR2-202ENST00000561630 HEATR3Q7Z4Q2 680 aa27.43■■□□□ 1.98
CDR2-202ENST00000561630 LRCH3Q96II8 777 aa27.43■■□□□ 1.98
CDR2-202ENST00000561630 TRPV6Q9H1D0 765 aa27.43■■□□□ 1.98
CDR2-202ENST00000561630 ALDH8A1Q9H2A2 487 aaPredicted RBP27.43■■□□□ 1.98
CDR2-202ENST00000561630 METAP2P50579 478 aaKnown RBP eCLIP27.42■■□□□ 1.98
CDR2-202ENST00000561630 MRPS9P82933 396 aaKnown RBP27.42■■□□□ 1.98
CDR2-202ENST00000561630 FPGSQ05932 587 aa27.42■■□□□ 1.98
CDR2-202ENST00000561630 MFSD5Q6N075 450 aa27.42■■□□□ 1.98
CDR2-202ENST00000561630 GPKOWQ92917 476 aaPredicted RBP eCLIP27.42■■□□□ 1.98
CDR2-202ENST00000561630 ZFP91Q96JP5 570 aaPredicted RBP27.42■■□□□ 1.98
CDR2-202ENST00000561630 NAP1L2Q9ULW6 460 aaPredicted RBP27.42■■□□□ 1.98
CDR2-202ENST00000561630 V9GY48 417 aaPredicted RBP27.42■■□□□ 1.98
CDR2-202ENST00000561630 CCDC196A0A1B0GTZ2 297 aa27.41■■□□□ 1.98
CDR2-202ENST00000561630 B4GALT4O60513 344 aa27.41■■□□□ 1.98
CDR2-202ENST00000561630 SHHQ15465 462 aa27.41■■□□□ 1.98
CDR2-202ENST00000561630 NBPF20Q3BBV1 942 aa27.41■■□□□ 1.98
CDR2-202ENST00000561630 WWC2Q6AWC2 1192 aa27.41■■□□□ 1.98
CDR2-202ENST00000561630 XRRA1Q6P2D8 792 aa27.41■■□□□ 1.98
CDR2-202ENST00000561630 DHX37Q8IY37 1157 aaKnown RBP27.41■■□□□ 1.98
CDR2-202ENST00000561630 INPP4AQ96PE3 977 aaPredicted RBP27.41■■□□□ 1.98
CDR2-202ENST00000561630 ADD1P35611 737 aaKnown RBP27.4■■□□□ 1.98
CDR2-202ENST00000561630 EPHB4P54760 987 aa27.4■■□□□ 1.98
CDR2-202ENST00000561630 SP2Q02086 613 aa27.4■■□□□ 1.98
CDR2-202ENST00000561630 DGKDQ16760 1214 aa27.4■■□□□ 1.98
CDR2-202ENST00000561630 GNPTABQ3T906 1256 aa27.4■■□□□ 1.98
CDR2-202ENST00000561630 C9orf50Q5SZB4 431 aa27.4■■□□□ 1.98
CDR2-202ENST00000561630 CELF3Q5SZQ8 465 aaKnown RBP27.4■■□□□ 1.98
CDR2-202ENST00000561630 MYSM1Q5VVJ2 828 aa27.4■■□□□ 1.98
CDR2-202ENST00000561630 PCNX4Q63HM2 1172 aa27.4■■□□□ 1.98
CDR2-202ENST00000561630 NFRKBQ6P4R8 1299 aa27.4■■□□□ 1.98
CDR2-202ENST00000561630 PPTC7Q8NI37 304 aa27.4■■□□□ 1.98
CDR2-202ENST00000561630 ZSWIM6Q9HCJ5 1215 aa27.4■■□□□ 1.98
CDR2-202ENST00000561630 NID2Q14112 1375 aa27.39■■□□□ 1.98
CDR2-202ENST00000561630 UBA1P22314 1058 aaKnown RBP27.39■■□□□ 1.98
CDR2-202ENST00000561630 RUFY3Q7L099 469 aa27.39■■□□□ 1.98
CDR2-202ENST00000561630 TEX2Q8IWB9 1127 aa27.39■■□□□ 1.98
CDR2-202ENST00000561630 PPP1R12CQ9BZL4 782 aa27.39■■□□□ 1.98
CDR2-202ENST00000561630 hCG_1984214I3L0E3 225 aa27.38■■□□□ 1.97
CDR2-202ENST00000561630 GGPS1O95749 300 aa27.38■■□□□ 1.97
CDR2-202ENST00000561630 SUPT20HL2P0C7V6 817 aa27.38■■□□□ 1.97
CDR2-202ENST00000561630 ICAM3P32942 547 aa27.38■■□□□ 1.97
CDR2-202ENST00000561630 TYW1BQ6NUM6 668 aa27.38■■□□□ 1.97
CDR2-202ENST00000561630 GPR153Q6NV75 609 aa27.38■■□□□ 1.97
CDR2-202ENST00000561630 PPP1R18Q6NYC8 613 aa27.38■■□□□ 1.97
CDR2-202ENST00000561630 ZNF713Q8N859 430 aaPredicted RBP27.38■■□□□ 1.97
CDR2-202ENST00000561630 TM6SF1Q9BZW5 370 aa27.38■■□□□ 1.97
CDR2-202ENST00000561630 HIPK3Q9H422 1215 aa27.38■■□□□ 1.97
CDR2-202ENST00000561630 TRMT13Q9NUP7 481 aaKnown RBP27.38■■□□□ 1.97
CDR2-202ENST00000561630 RTEL1Q9NZ71 1219 aa27.38■■□□□ 1.97
CDR2-202ENST00000561630 KIAA1217Q5T5P2 1943 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms