RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 ZMYND12Q9H0C1 365 aa15.47■□□□□ 0.07
RABGGTA-220ENST00000560998 ACTR5Q9H9F9 607 aaPredicted RBP15.47■□□□□ 0.07
RABGGTA-220ENST00000560998 MYH8P13535 1937 aa15.47■□□□□ 0.07
RABGGTA-220ENST00000560998 PPP1R3GB7ZBB8 358 aa15.47■□□□□ 0.07
RABGGTA-220ENST00000560998 GTPBP6O43824 516 aaPredicted RBP15.47■□□□□ 0.07
RABGGTA-220ENST00000560998 RASSF9O75901 435 aa15.47■□□□□ 0.07
RABGGTA-220ENST00000560998 SCP2P22307 547 aa15.47■□□□□ 0.07
RABGGTA-220ENST00000560998 CDR1P51861 262 aa15.47■□□□□ 0.07
RABGGTA-220ENST00000560998 GABPAQ06546 454 aa15.47■□□□□ 0.07
RABGGTA-220ENST00000560998 INF2Q27J81 1249 aa15.47■□□□□ 0.07
RABGGTA-220ENST00000560998 NBPF20Q3BBV1 942 aa15.47■□□□□ 0.07
RABGGTA-220ENST00000560998 EMC10Q5UCC4 262 aa15.47■□□□□ 0.07
RABGGTA-220ENST00000560998 STAMQ92783 540 aa15.47■□□□□ 0.07
RABGGTA-220ENST00000560998 RRP36Q96EU6 259 aaKnown RBP15.47■□□□□ 0.07
RABGGTA-220ENST00000560998 FAXDC2Q96IV6 333 aa15.47■□□□□ 0.07
RABGGTA-220ENST00000560998 RUFY1Q96T51 708 aa15.47■□□□□ 0.07
RABGGTA-220ENST00000560998 MTRQ99707 1265 aa15.47■□□□□ 0.07
RABGGTA-220ENST00000560998 A0A1B0GUA9 196 aa15.46■□□□□ 0.07
RABGGTA-220ENST00000560998 F8W031 263 aaPredicted RBP15.46■□□□□ 0.07
RABGGTA-220ENST00000560998 FXR1P51114 621 aaKnown RBP eCLIP15.46■□□□□ 0.07
RABGGTA-220ENST00000560998 NAPAP54920 295 aa15.46■□□□□ 0.07
RABGGTA-220ENST00000560998 PICALMQ13492 652 aa15.46■□□□□ 0.07
RABGGTA-220ENST00000560998 PPP2R5AQ15172 486 aa15.46■□□□□ 0.07
RABGGTA-220ENST00000560998 CCDC40Q4G0X9 1142 aa15.46■□□□□ 0.07
RABGGTA-220ENST00000560998 CEP85LQ5SZL2 805 aa15.46■□□□□ 0.07
RABGGTA-220ENST00000560998 CPLX3Q8WVH0 158 aa15.46■□□□□ 0.07
RABGGTA-220ENST00000560998 TMEM60Q9H2L4 133 aa15.46■□□□□ 0.07
RABGGTA-220ENST00000560998 DDX4Q9NQI0 724 aaKnown RBP15.46■□□□□ 0.07
RABGGTA-220ENST00000560998 ADAMTSL1Q8N6G6 1762 aa15.46■□□□□ 0.06
RABGGTA-220ENST00000560998 GOLGA6L7A0A1B0GV03 622 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 USP17L5A8MUK1 530 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 NAP1L1P55209 391 aaKnown RBP15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 SPAG1Q07617 926 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 NNTQ13423 1086 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 KLHL10Q6JEL2 608 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 EMBQ6PCB8 327 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 DPP8Q6V1X1 898 aaPredicted RBP15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 DTHD1Q6ZMT9 781 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 ZNF572Q7Z3I7 529 aaPredicted RBP15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 SMYD4Q8IYR2 804 aaPredicted RBP15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 MMGT1Q8N4V1 131 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 EPN3Q9H201 632 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 BLZF1Q9H2G9 400 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 CD248Q9HCU0 757 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 KCNG1Q9UIX4 513 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 SAMM50Q9Y512 469 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 IGKV6D-41A0A0C4DH26 115 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 LAD1O00515 517 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 HSF2BPO75031 334 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 TNFRSF8P28908 595 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 ALDH1B1P30837 517 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 PDE6BP35913 854 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 EPHB4P54760 987 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 DOK7Q18PE1 504 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 KDM7AQ6ZMT4 941 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 KRT25Q7Z3Z0 450 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 TAX1BP1Q86VP1 789 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 MXD3Q9BW11 206 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 MTMR4Q9NYA4 1195 aa15.45■□□□□ 0.06
RABGGTA-220ENST00000560998 SMCO2A6NFE2 343 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 PLSCR1O15162 318 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 NDUFA10O95299 355 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 AKR1B1P15121 316 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 EZRP15311 586 aaKnown RBP15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 CDC25AP30304 524 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 PRPHP41219 470 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 STX17P56962 302 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 C3orf20Q8ND61 904 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 C1orf131Q8NDD1 294 aaKnown RBP15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 CAGE1Q8TC20 777 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 CAVIN3Q969G5 261 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 FAM212AQ96EL1 285 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 PIGSQ96S52 555 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 EHD4Q9H223 541 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 RIOX1Q9H6W3 641 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 C6orf50Q9HD87 102 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 USP40Q9NVE5 1235 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 SEC63Q9UGP8 760 aaKnown RBP15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 LIMA1Q9UHB6 759 aaKnown RBP15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 MMP10P09238 476 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 PDHBP11177 359 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 GNA11P29992 359 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 STAT6P42226 847 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 SNCBQ16143 134 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 JAKMIP2Q96AA8 810 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 TRIM6Q9C030 488 aaPredicted RBP15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 VAT1LQ9HCJ6 419 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 DISC1Q9NRI5 854 aa15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 EPN1Q9Y6I3 576 aaPredicted RBP15.44■□□□□ 0.06
RABGGTA-220ENST00000560998 ATP1A1P05023 1023 aaKnown RBP15.43■□□□□ 0.06
RABGGTA-220ENST00000560998 MYBL2P10244 700 aa15.43■□□□□ 0.06
RABGGTA-220ENST00000560998 SCNN1DP51172 638 aa15.43■□□□□ 0.06
RABGGTA-220ENST00000560998 KRT83P78385 493 aa15.43■□□□□ 0.06
RABGGTA-220ENST00000560998 IFFO1Q0D2I5 559 aa15.43■□□□□ 0.06
RABGGTA-220ENST00000560998 NONOQ15233 471 aaKnown RBP eCLIP15.43■□□□□ 0.06
RABGGTA-220ENST00000560998 ZKSCAN8Q15776 578 aaPredicted RBP15.43■□□□□ 0.06
RABGGTA-220ENST00000560998 SOGA3Q5TF21 947 aa15.43■□□□□ 0.06
RABGGTA-220ENST00000560998 NAA35Q5VZE5 725 aa15.43■□□□□ 0.06
RABGGTA-220ENST00000560998 SND1Q7KZF4 910 aaKnown RBP eCLIP15.43■□□□□ 0.06
RABGGTA-220ENST00000560998 MASTLQ96GX5 879 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms