RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 SGPL1O95470 568 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 CFBP00751 764 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 HOXC6P09630 235 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 LIFRP42702 1097 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 GJA8P48165 433 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 CNTN2Q02246 1040 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 TRAF1Q13077 416 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 BAATQ14032 418 aaPredicted RBP9.26□□□□□ -0.93
LRRC28-219ENST00000560483 RTN1Q16799 776 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 ZNF792Q3KQV3 632 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 OLFML2BQ68BL8 750 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 EEPD1Q7L9B9 569 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 MCF2L2Q86YR7 1114 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 CMTR1Q8N1G2 835 aaKnown RBP9.26□□□□□ -0.93
LRRC28-219ENST00000560483 DPF3Q92784 378 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 BRF1Q92994 677 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 PIGSQ96S52 555 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 JMJD4Q9H9V9 463 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 ADD3Q9UEY8 706 aaKnown RBP9.26□□□□□ -0.93
LRRC28-219ENST00000560483 MRPL11Q9Y3B7 192 aaKnown RBP9.26□□□□□ -0.93
LRRC28-219ENST00000560483 PCDHA1Q9Y5I3 950 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 CYP46A1Q9Y6A2 500 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 MCM3APO60318 1980 aa9.26□□□□□ -0.93
LRRC28-219ENST00000560483 PALM3A6NDB9 673 aaPredicted RBP9.25□□□□□ -0.93
LRRC28-219ENST00000560483 ASB14A6NK59 587 aa9.25□□□□□ -0.93
LRRC28-219ENST00000560483 B4DLN1 442 aa9.25□□□□□ -0.93
LRRC28-219ENST00000560483 ZBTB5O15062 677 aa9.25□□□□□ -0.93
LRRC28-219ENST00000560483 MSCO60682 206 aa9.25□□□□□ -0.93
LRRC28-219ENST00000560483 RARBP10826 455 aa9.25□□□□□ -0.93
LRRC28-219ENST00000560483 METAP2P50579 478 aaKnown RBP eCLIP9.25□□□□□ -0.93
LRRC28-219ENST00000560483 MRPL12P52815 198 aaKnown RBP9.25□□□□□ -0.93
LRRC28-219ENST00000560483 AKAP17AQ02040 695 aaKnown RBP9.25□□□□□ -0.93
LRRC28-219ENST00000560483 PDE4DQ08499 809 aa9.25□□□□□ -0.93
LRRC28-219ENST00000560483 APOBRQ0VD83 1088 aa9.25□□□□□ -0.93
LRRC28-219ENST00000560483 ARMCX2Q7L311 632 aa9.25□□□□□ -0.93
LRRC28-219ENST00000560483 METTL3Q86U44 580 aaKnown RBP9.25□□□□□ -0.93
LRRC28-219ENST00000560483 CUL5Q93034 780 aa9.25□□□□□ -0.93
LRRC28-219ENST00000560483 LZTS2Q9BRK4 669 aa9.25□□□□□ -0.93
LRRC28-219ENST00000560483 MTA3Q9BTC8 594 aa9.25□□□□□ -0.93
LRRC28-219ENST00000560483 USP26Q9BXU7 913 aa9.25□□□□□ -0.93
LRRC28-219ENST00000560483 CYP39A1Q9NYL5 469 aa9.25□□□□□ -0.93
LRRC28-219ENST00000560483 DDX20Q9UHI6 824 aaKnown RBP9.25□□□□□ -0.93
LRRC28-219ENST00000560483 DIS3Q9Y2L1 958 aaKnown RBP9.25□□□□□ -0.93
LRRC28-219ENST00000560483 GTF3C3Q9Y5Q9 886 aa9.25□□□□□ -0.93
LRRC28-219ENST00000560483 WDR19Q8NEZ3 1342 aa9.25□□□□□ -0.93
LRRC28-219ENST00000560483 ZNF236Q9UL36 1845 aa9.24□□□□□ -0.93
LRRC28-219ENST00000560483 hCG_1642624A0A1W2PR95 340 aa9.24□□□□□ -0.93
LRRC28-219ENST00000560483 KBTBD13C9JR72 458 aa9.24□□□□□ -0.93
LRRC28-219ENST00000560483 AXIN1O15169 862 aa9.24□□□□□ -0.93
LRRC28-219ENST00000560483 PLEKHA8P1O95397 391 aa9.24□□□□□ -0.93
LRRC28-219ENST00000560483 SNRPBP14678 240 aaKnown RBP9.24□□□□□ -0.93
LRRC28-219ENST00000560483 RPS6KB1P23443 525 aa9.24□□□□□ -0.93
LRRC28-219ENST00000560483 RPS6P62753 249 aaKnown RBP9.24□□□□□ -0.93
LRRC28-219ENST00000560483 FUT2Q10981 343 aa9.24□□□□□ -0.93
LRRC28-219ENST00000560483 TROAPQ12815 778 aa9.24□□□□□ -0.93
LRRC28-219ENST00000560483 TSGA10IPQ3SY00 556 aa9.24□□□□□ -0.93
LRRC28-219ENST00000560483 ARHGEF16Q5VV41 709 aa9.24□□□□□ -0.93
LRRC28-219ENST00000560483 SLC30A10Q6XR72 485 aa9.24□□□□□ -0.93
LRRC28-219ENST00000560483 HEATR3Q7Z4Q2 680 aa9.24□□□□□ -0.93
LRRC28-219ENST00000560483 FANCBQ8NB91 859 aa9.24□□□□□ -0.93
LRRC28-219ENST00000560483 PURBQ96QR8 312 aaKnown RBP9.24□□□□□ -0.93
LRRC28-219ENST00000560483 HTATIP2Q9BUP3 242 aa9.24□□□□□ -0.93
LRRC28-219ENST00000560483 UPF3BQ9BZI7 483 aaKnown RBP9.24□□□□□ -0.93
LRRC28-219ENST00000560483 UPF2Q9HAU5 1272 aaKnown RBP9.24□□□□□ -0.93
LRRC28-219ENST00000560483 SPC25Q9HBM1 224 aa9.24□□□□□ -0.93
LRRC28-219ENST00000560483 PAK6Q9NQU5 681 aaPredicted RBP9.24□□□□□ -0.93
LRRC28-219ENST00000560483 RBM28Q9NW13 759 aaKnown RBP9.24□□□□□ -0.93
LRRC28-219ENST00000560483 RBBP6Q7Z6E9 1792 aaKnown RBP9.23□□□□□ -0.93
LRRC28-219ENST00000560483 PNMA6FA0A0J9YX94 578 aa9.23□□□□□ -0.93
LRRC28-219ENST00000560483 CCDC196A0A1B0GTZ2 297 aa9.23□□□□□ -0.93
LRRC28-219ENST00000560483 CPLX1O14810 134 aa9.23□□□□□ -0.93
LRRC28-219ENST00000560483 SEPT4O43236 478 aa9.23□□□□□ -0.93
LRRC28-219ENST00000560483 CYBAP13498 195 aa9.23□□□□□ -0.93
LRRC28-219ENST00000560483 AKR1A1P14550 325 aa9.23□□□□□ -0.93
LRRC28-219ENST00000560483 EXOSC10Q01780 885 aaKnown RBP9.23□□□□□ -0.93
LRRC28-219ENST00000560483 STK3Q13188 491 aa9.23□□□□□ -0.93
LRRC28-219ENST00000560483 ACVR2BQ13705 512 aa9.23□□□□□ -0.93
LRRC28-219ENST00000560483 COL9A3Q14050 684 aaPredicted RBP9.23□□□□□ -0.93
LRRC28-219ENST00000560483 GJC2Q5T442 439 aaPredicted RBP9.23□□□□□ -0.93
LRRC28-219ENST00000560483 MAP3K21Q5TCX8 1036 aa9.23□□□□□ -0.93
LRRC28-219ENST00000560483 APOA5Q6Q788 366 aa9.23□□□□□ -0.93
LRRC28-219ENST00000560483 RUFY3Q7L099 469 aa9.23□□□□□ -0.93
LRRC28-219ENST00000560483 NECAB2Q7Z6G3 386 aa9.23□□□□□ -0.93
LRRC28-219ENST00000560483 FCHSD1Q86WN1 690 aa9.23□□□□□ -0.93
LRRC28-219ENST00000560483 FBXO16Q8IX29 292 aaPredicted RBP9.23□□□□□ -0.93
LRRC28-219ENST00000560483 MSL3Q8N5Y2 521 aaKnown RBP9.23□□□□□ -0.93
LRRC28-219ENST00000560483 ARRDC4Q8NCT1 418 aa9.23□□□□□ -0.93
LRRC28-219ENST00000560483 TRPV1Q8NER1 839 aa9.23□□□□□ -0.93
LRRC28-219ENST00000560483 SMARCC2Q8TAQ2 1214 aa9.23□□□□□ -0.93
LRRC28-219ENST00000560483 VTI1AQ96AJ9 217 aa9.23□□□□□ -0.93
LRRC28-219ENST00000560483 PAWRQ96IZ0 340 aaKnown RBP9.23□□□□□ -0.93
LRRC28-219ENST00000560483 ABHD16BQ9H3Z7 469 aa9.23□□□□□ -0.93
LRRC28-219ENST00000560483 XPNPEP3Q9NQH7 507 aa9.23□□□□□ -0.93
LRRC28-219ENST00000560483 PDRG1Q9NUG6 133 aa9.23□□□□□ -0.93
LRRC28-219ENST00000560483 FAM184BQ9ULE4 1060 aa9.23□□□□□ -0.93
LRRC28-219ENST00000560483 SYNGAP1Q96PV0 1343 aa9.23□□□□□ -0.93
LRRC28-219ENST00000560483 GCOM1H8Y6P7 765 aaPredicted RBP9.22□□□□□ -0.93
LRRC28-219ENST00000560483 EPB41L2O43491 1005 aaKnown RBP9.22□□□□□ -0.93
LRRC28-219ENST00000560483 PPFIA3O75145 1194 aa9.22□□□□□ -0.93
LRRC28-219ENST00000560483 POLR2MP0CAP2 368 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms