RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 ENOX2Q16206 610 aaKnown RBP21.06■□□□□ 0.96
SEMA4B-215ENST00000560089 VPS37DQ86XT2 251 aa21.06■□□□□ 0.96
SEMA4B-215ENST00000560089 SEC31BQ9NQW1 1179 aa21.06■□□□□ 0.96
SEMA4B-215ENST00000560089 EHD2Q9NZN4 543 aa21.06■□□□□ 0.96
SEMA4B-215ENST00000560089 TRPC5Q9UL62 973 aaPredicted RBP21.06■□□□□ 0.96
SEMA4B-215ENST00000560089 GOLGA6L10A0A0M3HER8 536 aa21.06■□□□□ 0.96
SEMA4B-215ENST00000560089 CHGBP05060 677 aa21.06■□□□□ 0.96
SEMA4B-215ENST00000560089 GLI1P08151 1106 aa21.06■□□□□ 0.96
SEMA4B-215ENST00000560089 PDHA1P08559 390 aa21.06■□□□□ 0.96
SEMA4B-215ENST00000560089 GUCY2DQ02846 1103 aa21.06■□□□□ 0.96
SEMA4B-215ENST00000560089 SF3A3Q12874 501 aaKnown RBP eCLIP21.06■□□□□ 0.96
SEMA4B-215ENST00000560089 LBRQ14739 615 aaKnown RBP21.06■□□□□ 0.96
SEMA4B-215ENST00000560089 PSMB7Q99436 277 aa21.06■□□□□ 0.96
SEMA4B-215ENST00000560089 SYT15Q9BQS2 421 aa21.06■□□□□ 0.96
SEMA4B-215ENST00000560089 AATFQ9NY61 560 aaKnown RBP eCLIP21.06■□□□□ 0.96
SEMA4B-215ENST00000560089 UTYO14607 1347 aa21.05■□□□□ 0.96
SEMA4B-215ENST00000560089 CD44P16070 742 aaKnown RBP21.05■□□□□ 0.96
SEMA4B-215ENST00000560089 PCK1P35558 622 aa21.05■□□□□ 0.96
SEMA4B-215ENST00000560089 PAFAH1B1P43034 410 aa21.05■□□□□ 0.96
SEMA4B-215ENST00000560089 SETDB1Q15047 1291 aa21.05■□□□□ 0.96
SEMA4B-215ENST00000560089 KRI1Q8N9T8 703 aaKnown RBP21.05■□□□□ 0.96
SEMA4B-215ENST00000560089 GDF3Q9NR23 364 aa21.05■□□□□ 0.96
SEMA4B-215ENST00000560089 CWC25Q9NXE8 425 aaPredicted RBP21.05■□□□□ 0.96
SEMA4B-215ENST00000560089 SWAP70Q9UH65 585 aa21.05■□□□□ 0.96
SEMA4B-215ENST00000560089 SASH1O94885 1247 aa21.05■□□□□ 0.96
SEMA4B-215ENST00000560089 MCMDC2Q4G0Z9 681 aa21.05■□□□□ 0.96
SEMA4B-215ENST00000560089 INTS5Q6P9B9 1019 aaKnown RBP21.05■□□□□ 0.96
SEMA4B-215ENST00000560089 CHMP6Q96FZ7 201 aa21.05■□□□□ 0.96
SEMA4B-215ENST00000560089 CNOT8Q9UFF9 292 aaKnown RBP21.05■□□□□ 0.96
SEMA4B-215ENST00000560089 ZSCAN5CA6NGD5 496 aaPredicted RBP21.05■□□□□ 0.96
SEMA4B-215ENST00000560089 HEXIM1O94992 359 aaKnown RBP21.05■□□□□ 0.96
SEMA4B-215ENST00000560089 CXCR5P32302 372 aa21.05■□□□□ 0.96
SEMA4B-215ENST00000560089 FAM89AQ96GI7 184 aa21.05■□□□□ 0.96
SEMA4B-215ENST00000560089 ZWILCHQ9H900 591 aa21.05■□□□□ 0.96
SEMA4B-215ENST00000560089 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.05■□□□□ 0.96
SEMA4B-215ENST00000560089 RBM12Q9NTZ6 932 aaKnown RBP21.05■□□□□ 0.96
SEMA4B-215ENST00000560089 AGAP1Q9UPQ3 857 aa21.05■□□□□ 0.96
SEMA4B-215ENST00000560089 ZNF609O15014 1411 aa21.04■□□□□ 0.96
SEMA4B-215ENST00000560089 A8MUI8 341 aa21.04■□□□□ 0.96
SEMA4B-215ENST00000560089 E7EWF7 191 aa21.04■□□□□ 0.96
SEMA4B-215ENST00000560089 CUL4BQ13620 913 aa21.04■□□□□ 0.96
SEMA4B-215ENST00000560089 DZIP3Q86Y13 1208 aaKnown RBP21.04■□□□□ 0.96
SEMA4B-215ENST00000560089 TAB2Q9NYJ8 693 aa21.04■□□□□ 0.96
SEMA4B-215ENST00000560089 SGSM1Q2NKQ1 1148 aa21.04■□□□□ 0.96
SEMA4B-215ENST00000560089 RAB11FIP4Q86YS3 637 aa21.04■□□□□ 0.96
SEMA4B-215ENST00000560089 WHAMMQ8TF30 809 aa21.04■□□□□ 0.96
SEMA4B-215ENST00000560089 GPHNQ9NQX3 736 aaPredicted RBP21.04■□□□□ 0.96
SEMA4B-215ENST00000560089 PHF24Q9UPV7 400 aa21.04■□□□□ 0.96
SEMA4B-215ENST00000560089 LGR5O75473 907 aa21.03■□□□□ 0.96
SEMA4B-215ENST00000560089 ALDH1B1P30837 517 aa21.03■□□□□ 0.96
SEMA4B-215ENST00000560089 CYLC1P35663 651 aaPredicted RBP21.03■□□□□ 0.96
SEMA4B-215ENST00000560089 COPB1P53618 953 aaKnown RBP21.03■□□□□ 0.96
SEMA4B-215ENST00000560089 NFRKBQ6P4R8 1299 aa21.03■□□□□ 0.96
SEMA4B-215ENST00000560089 TTC26A0AVF1 554 aa21.03■□□□□ 0.96
SEMA4B-215ENST00000560089 TCIRG1Q13488 830 aa21.03■□□□□ 0.96
SEMA4B-215ENST00000560089 BIRC3Q13489 604 aa21.03■□□□□ 0.96
SEMA4B-215ENST00000560089 TMEM154Q6P9G4 183 aa21.03■□□□□ 0.96
SEMA4B-215ENST00000560089 LMBR1LQ6UX01 489 aa21.03■□□□□ 0.96
SEMA4B-215ENST00000560089 LRIG3Q6UXM1 1119 aa21.03■□□□□ 0.96
SEMA4B-215ENST00000560089 OR2W6PQ8NHA6 318 aa21.03■□□□□ 0.96
SEMA4B-215ENST00000560089 LUC7L2Q9Y383 392 aaKnown RBP21.03■□□□□ 0.96
SEMA4B-215ENST00000560089 RBM47A0AV96 593 aaKnown RBP21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 ATP11AP98196 1134 aa21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 TJP1Q07157 1748 aa21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 KIF5AQ12840 1032 aa21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 RNF220Q5VTB9 566 aa21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 CACNA2D4Q7Z3S7 1137 aa21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 PLCB1Q9NQ66 1216 aa21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 CCDC87Q9NVE4 849 aa21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 STK38LQ9Y2H1 464 aa21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 MAP3K15Q6ZN16 1313 aa21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 GOLGA8BA8MQT2 603 aa21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 IGF2BP3O00425 579 aaKnown RBP eCLIP21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 COBLO75128 1261 aa21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 TCP1P17987 556 aaKnown RBP21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 CASP7P55210 303 aa21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 ITIH4Q14624 930 aa21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 TRPM8Q7Z2W7 1104 aa21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 SMCR8Q8TEV9 937 aaPredicted RBP21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 KIFAP3Q92845 792 aa21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 PURBQ96QR8 312 aaKnown RBP21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 SLX1AQ9BQ83 275 aa21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 PHACTR1Q9C0D0 580 aa21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 LIMA1Q9UHB6 759 aaKnown RBP21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 HYOU1Q9Y4L1 999 aa21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 RFX7Q2KHR2 1363 aa21.02■□□□□ 0.96
SEMA4B-215ENST00000560089 TACC1O75410 805 aa21.01■□□□□ 0.95
SEMA4B-215ENST00000560089 LACTBP83111 547 aaPredicted RBP21.01■□□□□ 0.95
SEMA4B-215ENST00000560089 TTF1Q15361 905 aaPredicted RBP21.01■□□□□ 0.95
SEMA4B-215ENST00000560089 RUFY4Q6ZNE9 571 aa21.01■□□□□ 0.95
SEMA4B-215ENST00000560089 SMYD4Q8IYR2 804 aaPredicted RBP21.01■□□□□ 0.95
SEMA4B-215ENST00000560089 LINC00116Q8NCU8 138 aa21.01■□□□□ 0.95
SEMA4B-215ENST00000560089 FGD4Q96M96 766 aa21.01■□□□□ 0.95
SEMA4B-215ENST00000560089 RPS6KC1Q96S38 1066 aa21.01■□□□□ 0.95
SEMA4B-215ENST00000560089 IQCGQ9H095 443 aaKnown RBP21.01■□□□□ 0.95
SEMA4B-215ENST00000560089 PRLRP16471 622 aa21.01■□□□□ 0.95
SEMA4B-215ENST00000560089 UBXN1Q04323 297 aa21.01■□□□□ 0.95
SEMA4B-215ENST00000560089 KANK3Q6NY19 840 aa21.01■□□□□ 0.95
SEMA4B-215ENST00000560089 INCENPQ9NQS7 918 aa21.01■□□□□ 0.95
SEMA4B-215ENST00000560089 ADAM22Q9P0K1 906 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms