RNA–Protein interactions for RNA: ENST00000560047.1

CRTC3-207, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-207ENST00000560047 EGR3Q06889 387 aa9.65□□□□□ -0.86
CRTC3-207ENST00000560047 ALPK1Q96QP1 1244 aa9.65□□□□□ -0.86
CRTC3-207ENST00000560047 RC3H2Q9HBD1 1191 aaKnown RBP9.65□□□□□ -0.86
CRTC3-207ENST00000560047 CHST7Q9NS84 486 aa9.65□□□□□ -0.86
CRTC3-207ENST00000560047 FAM86C1Q9NVL1 165 aa9.65□□□□□ -0.86
CRTC3-207ENST00000560047 PRKAG3Q9UGI9 489 aa9.65□□□□□ -0.86
CRTC3-207ENST00000560047 PCDHA11Q9Y5I1 949 aa9.65□□□□□ -0.86
CRTC3-207ENST00000560047 COL18A1P39060 1754 aa9.65□□□□□ -0.87
CRTC3-207ENST00000560047 FLT4P35916 1363 aa9.64□□□□□ -0.87
CRTC3-207ENST00000560047 IL13P35225 146 aa9.64□□□□□ -0.87
CRTC3-207ENST00000560047 EVA1CP58658 441 aa9.64□□□□□ -0.87
CRTC3-207ENST00000560047 EIF4A2Q14240 407 aaKnown RBP9.64□□□□□ -0.87
CRTC3-207ENST00000560047 NOL9Q5SY16 702 aaKnown RBP9.64□□□□□ -0.87
CRTC3-207ENST00000560047 DCAF15Q66K64 600 aa9.64□□□□□ -0.87
CRTC3-207ENST00000560047 SYTL4Q96C24 671 aaPredicted RBP9.64□□□□□ -0.87
CRTC3-207ENST00000560047 TCTN2Q96GX1 697 aa9.64□□□□□ -0.87
CRTC3-207ENST00000560047 GFOD1Q9NXC2 390 aa9.64□□□□□ -0.87
CRTC3-207ENST00000560047 PCDHB10Q9UN67 800 aa9.64□□□□□ -0.87
CRTC3-207ENST00000560047 INSRP06213 1382 aa9.63□□□□□ -0.87
CRTC3-207ENST00000560047 SLIT2O94813 1529 aa9.63□□□□□ -0.87
CRTC3-207ENST00000560047 TCEAL1Q15170 157 aa9.63□□□□□ -0.87
CRTC3-207ENST00000560047 NBPF6Q5VWK0 638 aa9.63□□□□□ -0.87
CRTC3-207ENST00000560047 UNC5CLQ8IV45 518 aa9.63□□□□□ -0.87
CRTC3-207ENST00000560047 USHBP1Q8N6Y0 703 aa9.63□□□□□ -0.87
CRTC3-207ENST00000560047 LRRN4CLQ8ND94 238 aa9.63□□□□□ -0.87
CRTC3-207ENST00000560047 NBPF4Q96M43 638 aa9.63□□□□□ -0.87
CRTC3-207ENST00000560047 ZNF408Q9H9D4 720 aa9.63□□□□□ -0.87
CRTC3-207ENST00000560047 SLAMF8Q9P0V8 285 aa9.63□□□□□ -0.87
CRTC3-207ENST00000560047 RGS17Q9UGC6 210 aaPredicted RBP9.63□□□□□ -0.87
CRTC3-207ENST00000560047 SMG6Q86US8 1419 aaKnown RBP9.63□□□□□ -0.87
CRTC3-207ENST00000560047 LTN1O94822 1766 aa9.63□□□□□ -0.87
CRTC3-207ENST00000560047 KIF24Q5T7B8 1368 aa9.63□□□□□ -0.87
CRTC3-207ENST00000560047 BCL9LQ86UU0 1499 aa9.62□□□□□ -0.87
CRTC3-207ENST00000560047 SSU72P8A0A1W2PR75 194 aa9.62□□□□□ -0.87
CRTC3-207ENST00000560047 SHOXO15266 292 aa9.62□□□□□ -0.87
CRTC3-207ENST00000560047 DIAPH1O60610 1272 aaKnown RBP9.62□□□□□ -0.87
CRTC3-207ENST00000560047 CD247P20963 164 aa9.62□□□□□ -0.87
CRTC3-207ENST00000560047 PCBP3P57721 371 aaKnown RBP9.62□□□□□ -0.87
CRTC3-207ENST00000560047 VHLLQ6RSH7 139 aa9.62□□□□□ -0.87
CRTC3-207ENST00000560047 RNF111Q6ZNA4 994 aa9.62□□□□□ -0.87
CRTC3-207ENST00000560047 CFAP53Q96M91 514 aa9.62□□□□□ -0.87
CRTC3-207ENST00000560047 GP6Q9HCN6 339 aa9.62□□□□□ -0.87
CRTC3-207ENST00000560047 ACTR10Q9NZ32 417 aa9.62□□□□□ -0.87
CRTC3-207ENST00000560047 RTL1A6NKG5 1358 aa9.62□□□□□ -0.87
CRTC3-207ENST00000560047 RGPD5Q99666 1765 aa9.61□□□□□ -0.87
CRTC3-207ENST00000560047 BIN1O00499 593 aa9.61□□□□□ -0.87
CRTC3-207ENST00000560047 HEATR6Q6AI08 1181 aaKnown RBP9.61□□□□□ -0.87
CRTC3-207ENST00000560047 KIAA1211LQ6NV74 962 aa9.61□□□□□ -0.87
CRTC3-207ENST00000560047 TOM1L2Q6ZVM7 507 aa9.61□□□□□ -0.87
CRTC3-207ENST00000560047 LINC00116Q8NCU8 138 aa9.61□□□□□ -0.87
CRTC3-207ENST00000560047 HAUS7Q99871 368 aa9.61□□□□□ -0.87
CRTC3-207ENST00000560047 DSCC1Q9BVC3 393 aa9.61□□□□□ -0.87
CRTC3-207ENST00000560047 R3HCC1Q9Y3T6 440 aaKnown RBP9.61□□□□□ -0.87
CRTC3-207ENST00000560047 ZNF451Q9Y4E5 1061 aa9.61□□□□□ -0.87
CRTC3-207ENST00000560047 BLMP54132 1417 aaPredicted RBP9.61□□□□□ -0.87
CRTC3-207ENST00000560047 LMO7Q8WWI1 1683 aa9.61□□□□□ -0.87
CRTC3-207ENST00000560047 COL14A1Q05707 1796 aaKnown RBP9.6□□□□□ -0.87
CRTC3-207ENST00000560047 COL3A1P02461 1466 aaPredicted RBP9.6□□□□□ -0.87
CRTC3-207ENST00000560047 COL5A2P05997 1499 aaPredicted RBP9.6□□□□□ -0.87
CRTC3-207ENST00000560047 CDK12Q9NYV4 1490 aaPredicted RBP9.6□□□□□ -0.87
CRTC3-207ENST00000560047 WDR17Q8IZU2 1322 aa9.6□□□□□ -0.87
CRTC3-207ENST00000560047 A0A087WZG4 1122 aa9.6□□□□□ -0.87
CRTC3-207ENST00000560047 U2SURPO15042 1029 aaKnown RBP9.6□□□□□ -0.87
CRTC3-207ENST00000560047 ITGA4P13612 1032 aa9.6□□□□□ -0.87
CRTC3-207ENST00000560047 TAL1P17542 331 aaPredicted RBP9.6□□□□□ -0.87
CRTC3-207ENST00000560047 GDNFP39905 211 aa9.6□□□□□ -0.87
CRTC3-207ENST00000560047 NCAPHQ15003 741 aa9.6□□□□□ -0.87
CRTC3-207ENST00000560047 ATG4DQ86TL0 474 aaPredicted RBP9.6□□□□□ -0.87
CRTC3-207ENST00000560047 KLHL6Q8WZ60 621 aa9.6□□□□□ -0.87
CRTC3-207ENST00000560047 DHX38Q92620 1227 aaKnown RBP9.6□□□□□ -0.87
CRTC3-207ENST00000560047 ADAMTS10Q9H324 1103 aa9.6□□□□□ -0.87
CRTC3-207ENST00000560047 USP35Q9P2H5 1018 aa9.6□□□□□ -0.87
CRTC3-207ENST00000560047 TMEM59LQ9UK28 342 aa9.6□□□□□ -0.87
CRTC3-207ENST00000560047 TCFL5Q9UL49 500 aa9.6□□□□□ -0.87
CRTC3-207ENST00000560047 MINPP1Q9UNW1 487 aa9.6□□□□□ -0.87
CRTC3-207ENST00000560047 CTNND2Q9UQB3 1225 aa9.6□□□□□ -0.87
CRTC3-207ENST00000560047 DNAJC25-GNG10A0A024R161 153 aa9.59□□□□□ -0.87
CRTC3-207ENST00000560047 MEIS1O00470 390 aa9.59□□□□□ -0.87
CRTC3-207ENST00000560047 GSNP06396 782 aa9.59□□□□□ -0.87
CRTC3-207ENST00000560047 SYPP08247 313 aa9.59□□□□□ -0.87
CRTC3-207ENST00000560047 HMOX1P09601 288 aa9.59□□□□□ -0.87
CRTC3-207ENST00000560047 ZNF445P59923 1031 aa9.59□□□□□ -0.87
CRTC3-207ENST00000560047 TEKQ02763 1124 aa9.59□□□□□ -0.87
CRTC3-207ENST00000560047 VPS72Q15906 364 aa9.59□□□□□ -0.87
CRTC3-207ENST00000560047 RALGPS1Q5JS13 557 aa9.59□□□□□ -0.87
CRTC3-207ENST00000560047 FOXP3Q9BZS1 431 aa9.59□□□□□ -0.87
CRTC3-207ENST00000560047 TANGO6Q9C0B7 1094 aa9.59□□□□□ -0.87
CRTC3-207ENST00000560047 GBP3Q9H0R5 595 aa9.59□□□□□ -0.87
CRTC3-207ENST00000560047 FHOD1Q9Y613 1164 aa9.59□□□□□ -0.87
CRTC3-207ENST00000560047 SPATA31A1Q5TZJ5 1347 aa9.58□□□□□ -0.88
CRTC3-207ENST00000560047 SPATA31A5Q5VU36 1347 aa9.58□□□□□ -0.88
CRTC3-207ENST00000560047 SPATA31A7Q8IWB4 1347 aa9.58□□□□□ -0.88
CRTC3-207ENST00000560047 PLCH1Q4KWH8 1693 aa9.58□□□□□ -0.88
CRTC3-207ENST00000560047 CCER2I3L3R5 266 aa9.58□□□□□ -0.88
CRTC3-207ENST00000560047 CBFA2T2O43439 604 aa9.58□□□□□ -0.88
CRTC3-207ENST00000560047 U2AF1L5P0DN76 240 aaPredicted RBP9.58□□□□□ -0.88
CRTC3-207ENST00000560047 JUNBP17275 347 aaPredicted RBP9.58□□□□□ -0.88
CRTC3-207ENST00000560047 ATP2B1P20020 1258 aa9.58□□□□□ -0.88
CRTC3-207ENST00000560047 U2AF1Q01081 240 aaKnown RBP eCLIP9.58□□□□□ -0.88
CRTC3-207ENST00000560047 FXNQ16595 210 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms