RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 TAPT1Q6NXT6 567 aa10.38□□□□□ -0.75
HMG20A-209ENST00000559728 ARMCX2Q7L311 632 aa10.38□□□□□ -0.75
HMG20A-209ENST00000559728 FCHSD1Q86WN1 690 aa10.38□□□□□ -0.75
HMG20A-209ENST00000559728 TEX2Q8IWB9 1127 aa10.38□□□□□ -0.75
HMG20A-209ENST00000559728 FAM177A1Q8N128 213 aaPredicted RBP10.38□□□□□ -0.75
HMG20A-209ENST00000559728 MSL3Q8N5Y2 521 aaKnown RBP10.38□□□□□ -0.75
HMG20A-209ENST00000559728 DNERQ8NFT8 737 aa10.38□□□□□ -0.75
HMG20A-209ENST00000559728 CUL5Q93034 780 aa10.38□□□□□ -0.75
HMG20A-209ENST00000559728 INTS4Q96HW7 963 aaKnown RBP10.38□□□□□ -0.75
HMG20A-209ENST00000559728 ZNF333Q96JL9 665 aa10.38□□□□□ -0.75
HMG20A-209ENST00000559728 RMDN3Q96TC7 470 aa10.38□□□□□ -0.75
HMG20A-209ENST00000559728 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.38□□□□□ -0.75
HMG20A-209ENST00000559728 BIN2Q9UBW5 565 aaPredicted RBP10.38□□□□□ -0.75
HMG20A-209ENST00000559728 PCDHA6Q9UN73 950 aa10.38□□□□□ -0.75
HMG20A-209ENST00000559728 PCDHA8Q9Y5H6 950 aa10.38□□□□□ -0.75
HMG20A-209ENST00000559728 MGAMO43451 1857 aa10.38□□□□□ -0.75
HMG20A-209ENST00000559728 DOCK3Q8IZD9 2030 aa10.38□□□□□ -0.75
HMG20A-209ENST00000559728 LOC102724159A0A0B4J2E5 919 aa10.37□□□□□ -0.75
HMG20A-209ENST00000559728 EIF2AK2P19525 551 aaKnown RBP10.37□□□□□ -0.75
HMG20A-209ENST00000559728 PTGS1P23219 599 aa10.37□□□□□ -0.75
HMG20A-209ENST00000559728 GJB2P29033 226 aa10.37□□□□□ -0.75
HMG20A-209ENST00000559728 CCND3P30281 292 aaPredicted RBP10.37□□□□□ -0.75
HMG20A-209ENST00000559728 MRPL12P52815 198 aaKnown RBP10.37□□□□□ -0.75
HMG20A-209ENST00000559728 UBXN2AP68543 259 aa10.37□□□□□ -0.75
HMG20A-209ENST00000559728 PWP2Q15269 919 aaKnown RBP10.37□□□□□ -0.75
HMG20A-209ENST00000559728 JAKMIP3Q5VZ66 844 aa10.37□□□□□ -0.75
HMG20A-209ENST00000559728 VSIG10LQ86VR7 867 aa10.37□□□□□ -0.75
HMG20A-209ENST00000559728 TRMT44Q8IYL2 757 aaKnown RBP10.37□□□□□ -0.75
HMG20A-209ENST00000559728 FBXO18Q8NFZ0 1043 aa10.37□□□□□ -0.75
HMG20A-209ENST00000559728 NSUN6Q8TEA1 469 aaKnown RBP10.37□□□□□ -0.75
HMG20A-209ENST00000559728 WASF1Q92558 559 aa10.37□□□□□ -0.75
HMG20A-209ENST00000559728 C6orf50Q9HD87 102 aa10.37□□□□□ -0.75
HMG20A-209ENST00000559728 PDGFCQ9NRA1 345 aa10.37□□□□□ -0.75
HMG20A-209ENST00000559728 SLC5A4Q9NY91 659 aa10.37□□□□□ -0.75
HMG20A-209ENST00000559728 PCDHA4Q9UN74 947 aa10.37□□□□□ -0.75
HMG20A-209ENST00000559728 RBM47A0AV96 593 aaKnown RBP10.36□□□□□ -0.75
HMG20A-209ENST00000559728 FAM205CA6NFA0 338 aa10.36□□□□□ -0.75
HMG20A-209ENST00000559728 ASB14A6NK59 587 aa10.36□□□□□ -0.75
HMG20A-209ENST00000559728 KIF28PB7ZC32 967 aa10.36□□□□□ -0.75
HMG20A-209ENST00000559728 MMP1P03956 469 aa10.36□□□□□ -0.75
HMG20A-209ENST00000559728 NR3C2P08235 984 aa10.36□□□□□ -0.75
HMG20A-209ENST00000559728 ITGB5P18084 799 aa10.36□□□□□ -0.75
HMG20A-209ENST00000559728 SREBF1P36956 1147 aa10.36□□□□□ -0.75
HMG20A-209ENST00000559728 FOSBP53539 338 aa10.36□□□□□ -0.75
HMG20A-209ENST00000559728 NLRP5P59047 1200 aa10.36□□□□□ -0.75
HMG20A-209ENST00000559728 GUCY1B3Q02153 619 aa10.36□□□□□ -0.75
HMG20A-209ENST00000559728 SEMA3FQ13275 785 aa10.36□□□□□ -0.75
HMG20A-209ENST00000559728 NR5A1Q13285 461 aa10.36□□□□□ -0.75
HMG20A-209ENST00000559728 ACVR2BQ13705 512 aa10.36□□□□□ -0.75
HMG20A-209ENST00000559728 SLC9C1Q4G0N8 1177 aa10.36□□□□□ -0.75
HMG20A-209ENST00000559728 ARHGEF16Q5VV41 709 aa10.36□□□□□ -0.75
HMG20A-209ENST00000559728 BLIDQ8IZY5 108 aa10.36□□□□□ -0.75
HMG20A-209ENST00000559728 CCDC148Q8NFR7 591 aa10.36□□□□□ -0.75
HMG20A-209ENST00000559728 CCDC12Q8WUD4 166 aaPredicted RBP10.36□□□□□ -0.75
HMG20A-209ENST00000559728 IWS1Q96ST2 819 aa10.36□□□□□ -0.75
HMG20A-209ENST00000559728 ANO3Q9BYT9 981 aa10.36□□□□□ -0.75
HMG20A-209ENST00000559728 UNC93B1Q9H1C4 597 aa10.36□□□□□ -0.75
HMG20A-209ENST00000559728 SCUBE2Q9NQ36 999 aa10.36□□□□□ -0.75
HMG20A-209ENST00000559728 PAK6Q9NQU5 681 aaPredicted RBP10.36□□□□□ -0.75
HMG20A-209ENST00000559728 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.36□□□□□ -0.75
HMG20A-209ENST00000559728 ADD3Q9UEY8 706 aaKnown RBP10.36□□□□□ -0.75
HMG20A-209ENST00000559728 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.35□□□□□ -0.75
HMG20A-209ENST00000559728 BTBD18B2RXH4 712 aa10.35□□□□□ -0.75
HMG20A-209ENST00000559728 WNT7AO00755 349 aa10.35□□□□□ -0.75
HMG20A-209ENST00000559728 ARIH2O95376 493 aa10.35□□□□□ -0.75
HMG20A-209ENST00000559728 GNA11P29992 359 aa10.35□□□□□ -0.75
HMG20A-209ENST00000559728 AP3B2Q13367 1082 aa10.35□□□□□ -0.75
HMG20A-209ENST00000559728 PCNX4Q63HM2 1172 aa10.35□□□□□ -0.75
HMG20A-209ENST00000559728 GALNT17Q6IS24 598 aa10.35□□□□□ -0.75
HMG20A-209ENST00000559728 CCDC62Q6P9F0 684 aa10.35□□□□□ -0.75
HMG20A-209ENST00000559728 EEPD1Q7L9B9 569 aa10.35□□□□□ -0.75
HMG20A-209ENST00000559728 HSCBQ8IWL3 235 aa10.35□□□□□ -0.75
HMG20A-209ENST00000559728 FBXO16Q8IX29 292 aaPredicted RBP10.35□□□□□ -0.75
HMG20A-209ENST00000559728 REXO1Q8N1G1 1221 aaKnown RBP10.35□□□□□ -0.75
HMG20A-209ENST00000559728 CYP2W1Q8TAV3 490 aa10.35□□□□□ -0.75
HMG20A-209ENST00000559728 LENG1Q96BZ8 264 aaPredicted RBP10.35□□□□□ -0.75
HMG20A-209ENST00000559728 C8orf76Q96K31 380 aa10.35□□□□□ -0.75
HMG20A-209ENST00000559728 INPP4AQ96PE3 977 aaPredicted RBP10.35□□□□□ -0.75
HMG20A-209ENST00000559728 GLT8D2Q9H1C3 349 aa10.35□□□□□ -0.75
HMG20A-209ENST00000559728 NRBP1Q9UHY1 535 aa10.35□□□□□ -0.75
HMG20A-209ENST00000559728 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.35□□□□□ -0.75
HMG20A-209ENST00000559728 EIF3JO75822 258 aaKnown RBP10.34□□□□□ -0.75
HMG20A-209ENST00000559728 FOSP01100 380 aaPredicted RBP10.34□□□□□ -0.75
HMG20A-209ENST00000559728 CYP3A4P08684 503 aa10.34□□□□□ -0.75
HMG20A-209ENST00000559728 CCL5P13501 91 aa10.34□□□□□ -0.75
HMG20A-209ENST00000559728 CIITAP33076 1130 aa10.34□□□□□ -0.75
HMG20A-209ENST00000559728 ADCYAP1R1P41586 468 aa10.34□□□□□ -0.75
HMG20A-209ENST00000559728 ARHGAP4P98171 946 aa10.34□□□□□ -0.75
HMG20A-209ENST00000559728 MFSD14CQ5VZR4 134 aa10.34□□□□□ -0.75
HMG20A-209ENST00000559728 DIS3L2Q8IYB7 885 aaKnown RBP10.34□□□□□ -0.75
HMG20A-209ENST00000559728 LENG9Q96B70 501 aa10.34□□□□□ -0.75
HMG20A-209ENST00000559728 TMEM121BQ9BXQ6 578 aaPredicted RBP10.34□□□□□ -0.75
HMG20A-209ENST00000559728 ABHD16BQ9H3Z7 469 aa10.34□□□□□ -0.75
HMG20A-209ENST00000559728 BCAS3Q9H6U6 928 aa10.34□□□□□ -0.75
HMG20A-209ENST00000559728 VTA1Q9NP79 307 aa10.34□□□□□ -0.75
HMG20A-209ENST00000559728 SMC3Q9UQE7 1217 aa10.34□□□□□ -0.75
HMG20A-209ENST00000559728 GNEQ9Y223 722 aaKnown RBP10.34□□□□□ -0.75
HMG20A-209ENST00000559728 UBIAD1Q9Y5Z9 338 aa10.34□□□□□ -0.75
HMG20A-209ENST00000559728 LRRC37A2A6NM11 1700 aa10.33□□□□□ -0.76
HMG20A-209ENST00000559728 IGLV3-22A0A075B6J6 115 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms