RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 DHX38Q92620 1227 aaKnown RBP10.65□□□□□ -0.7
SNRPA1-208ENST00000559686 MTMR4Q9NYA4 1195 aa10.65□□□□□ -0.7
SNRPA1-208ENST00000559686 PRKAG3Q9UGI9 489 aa10.65□□□□□ -0.7
SNRPA1-208ENST00000559686 CTNNA3Q9UI47 895 aa10.65□□□□□ -0.7
SNRPA1-208ENST00000559686 KMT2EQ8IZD2 1858 aa10.65□□□□□ -0.7
SNRPA1-208ENST00000559686 RAD50Q92878 1312 aa10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 ABHD14A-ACY1A0A1B0GW23 586 aa10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 UPP2O95045 317 aa10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 TTLL1O95922 423 aa10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 FDX1P10109 184 aa10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 CKBP12277 381 aa10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 CALML3P27482 149 aa10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 PTPN11Q06124 597 aaPredicted RBP10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 PDE4BQ07343 736 aa10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 DLX2Q07687 328 aaPredicted RBP10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 PDE4DQ08499 809 aa10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 HERC4Q5GLZ8 1057 aaPredicted RBP10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 SLC30A10Q6XR72 485 aa10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 CHST3Q7LGC8 479 aa10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 FAM160B2Q86V87 743 aa10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 CLASRPQ8N2M8 674 aaKnown RBP10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 GMCL1P1Q8NEA9 526 aa10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 CAGE1Q8TC20 777 aa10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 STAG1Q8WVM7 1258 aa10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 EDAQ92838 391 aa10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 CTAGE1Q96RT6 745 aa10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 NSUN3Q9H649 340 aaKnown RBP10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 IGFLR1Q9H665 355 aa10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 ADD3Q9UEY8 706 aaKnown RBP10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 INSL6Q9Y581 213 aa10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 MYO15AQ9UKN7 3530 aa10.64□□□□□ -0.71
SNRPA1-208ENST00000559686 STXBP3O00186 592 aa10.63□□□□□ -0.71
SNRPA1-208ENST00000559686 NFIBO00712 420 aa10.63□□□□□ -0.71
SNRPA1-208ENST00000559686 MBTPS2O43462 519 aa10.63□□□□□ -0.71
SNRPA1-208ENST00000559686 KPNA6O60684 536 aa10.63□□□□□ -0.71
SNRPA1-208ENST00000559686 TSPY3P0CV98 308 aa10.63□□□□□ -0.71
SNRPA1-208ENST00000559686 TSPY8P0CW00 308 aa10.63□□□□□ -0.71
SNRPA1-208ENST00000559686 TXNP10599 105 aaKnown RBP10.63□□□□□ -0.71
SNRPA1-208ENST00000559686 SLC1A4P43007 532 aa10.63□□□□□ -0.71
SNRPA1-208ENST00000559686 ZKSCAN2Q63HK3 967 aa10.63□□□□□ -0.71
SNRPA1-208ENST00000559686 CEP85Q6P2H3 762 aa10.63□□□□□ -0.71
SNRPA1-208ENST00000559686 RPAP2Q8IXW5 612 aaPredicted RBP10.63□□□□□ -0.71
SNRPA1-208ENST00000559686 FTSJ3Q8IY81 847 aaKnown RBP10.63□□□□□ -0.71
SNRPA1-208ENST00000559686 PDCD7Q8N8D1 485 aaKnown RBP10.63□□□□□ -0.71
SNRPA1-208ENST00000559686 MORC4Q8TE76 937 aa10.63□□□□□ -0.71
SNRPA1-208ENST00000559686 AFG1LQ8WV93 481 aa10.63□□□□□ -0.71
SNRPA1-208ENST00000559686 ATOH1Q92858 354 aaPredicted RBP10.63□□□□□ -0.71
SNRPA1-208ENST00000559686 MKL1Q969V6 931 aa10.63□□□□□ -0.71
SNRPA1-208ENST00000559686 ALG1Q9BT22 464 aa10.63□□□□□ -0.71
SNRPA1-208ENST00000559686 PRR12Q9ULL5 1215 aa10.63□□□□□ -0.71
SNRPA1-208ENST00000559686 RBM47A0AV96 593 aaKnown RBP10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 A6NJR5 290 aa10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 GSG1L2A8MUP6 293 aa10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 H3BNC9 293 aa10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 ARIH2O95376 493 aa10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 CXCL10P02778 98 aa10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 AMHP03971 560 aa10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 APPP05067 770 aa10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 GTF2F1P35269 517 aaKnown RBP eCLIP10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 SLC16A2P36021 539 aa10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 LTBRP36941 435 aa10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 TDO2P48775 406 aa10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 VCPP55072 806 aaKnown RBP10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 SMAD2Q15796 467 aaKnown RBP10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 CCDC96Q2M329 555 aa10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 SBK1Q52WX2 424 aa10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 ZNF618Q5T7W0 954 aa10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 TRIM67Q6ZTA4 783 aa10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 TMEM192Q8IY95 271 aa10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 WNT8BQ93098 351 aa10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 STRBPQ96SI9 672 aaKnown RBP10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 YME1L1Q96TA2 773 aa10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 POP1Q99575 1024 aaKnown RBP10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 HDAC6Q9UBN7 1215 aa10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 MICAL3Q7RTP6 2002 aa10.62□□□□□ -0.71
SNRPA1-208ENST00000559686 COL4A6Q14031 1691 aa10.61□□□□□ -0.71
SNRPA1-208ENST00000559686 TECTAO75443 2155 aa10.61□□□□□ -0.71
SNRPA1-208ENST00000559686 H0Y858 1186 aa10.61□□□□□ -0.71
SNRPA1-208ENST00000559686 LINC01565O15544 149 aa10.61□□□□□ -0.71
SNRPA1-208ENST00000559686 EFCAB14O75071 495 aa10.61□□□□□ -0.71
SNRPA1-208ENST00000559686 LGR5O75473 907 aa10.61□□□□□ -0.71
SNRPA1-208ENST00000559686 ZNF200P98182 395 aaPredicted RBP10.61□□□□□ -0.71
SNRPA1-208ENST00000559686 FOXK2Q01167 660 aa10.61□□□□□ -0.71
SNRPA1-208ENST00000559686 TFAP4Q01664 338 aa10.61□□□□□ -0.71
SNRPA1-208ENST00000559686 MBTPS1Q14703 1052 aa10.61□□□□□ -0.71
SNRPA1-208ENST00000559686 UBE3CQ15386 1083 aa10.61□□□□□ -0.71
SNRPA1-208ENST00000559686 C7orf31Q8N865 590 aa10.61□□□□□ -0.71
SNRPA1-208ENST00000559686 DBF4BQ8NFT6 615 aa10.61□□□□□ -0.71
SNRPA1-208ENST00000559686 SCFD2Q8WU76 684 aa10.61□□□□□ -0.71
SNRPA1-208ENST00000559686 EPB41L4AQ9HCS5 686 aaPredicted RBP10.61□□□□□ -0.71
SNRPA1-208ENST00000559686 TLR9Q9NR96 1032 aa10.61□□□□□ -0.71
SNRPA1-208ENST00000559686 PLXNA3P51805 1871 aa10.61□□□□□ -0.71
SNRPA1-208ENST00000559686 RALGAPA2Q2PPJ7 1873 aa10.6□□□□□ -0.71
SNRPA1-208ENST00000559686 NKRFO15226 690 aaKnown RBP eCLIP10.6□□□□□ -0.71
SNRPA1-208ENST00000559686 SORBS3O60504 671 aa10.6□□□□□ -0.71
SNRPA1-208ENST00000559686 TBX10O75333 385 aa10.6□□□□□ -0.71
SNRPA1-208ENST00000559686 ICAM1P05362 532 aa10.6□□□□□ -0.71
SNRPA1-208ENST00000559686 MMP3P08254 477 aa10.6□□□□□ -0.71
SNRPA1-208ENST00000559686 RLBP1P12271 317 aa10.6□□□□□ -0.71
SNRPA1-208ENST00000559686 CTNNB1P35222 781 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms