RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 NKRFO15226 690 aaKnown RBP eCLIP13.14□□□□□ -0.31
CHRNA3-205ENST00000559080 TOP1P11387 765 aaKnown RBP13.14□□□□□ -0.31
CHRNA3-205ENST00000559080 IL9P15248 144 aa13.14□□□□□ -0.31
CHRNA3-205ENST00000559080 EDNRBP24530 442 aa13.14□□□□□ -0.31
CHRNA3-205ENST00000559080 NT5C2P49902 561 aa13.14□□□□□ -0.31
CHRNA3-205ENST00000559080 ERVK-21P61565 698 aa13.14□□□□□ -0.31
CHRNA3-205ENST00000559080 BFSP2Q13515 415 aa13.14□□□□□ -0.31
CHRNA3-205ENST00000559080 IMMTQ16891 758 aaKnown RBP13.14□□□□□ -0.31
CHRNA3-205ENST00000559080 LEXMQ3ZCV2 418 aa13.14□□□□□ -0.31
CHRNA3-205ENST00000559080 TTBK2Q6IQ55 1244 aa13.14□□□□□ -0.31
CHRNA3-205ENST00000559080 SLC30A10Q6XR72 485 aa13.14□□□□□ -0.31
CHRNA3-205ENST00000559080 GJD3Q8N144 294 aa13.14□□□□□ -0.31
CHRNA3-205ENST00000559080 RUFY2Q8WXA3 655 aa13.14□□□□□ -0.31
CHRNA3-205ENST00000559080 TCP11L1Q9NUJ3 509 aa13.14□□□□□ -0.31
CHRNA3-205ENST00000559080 CTNNA3Q9UI47 895 aa13.14□□□□□ -0.31
CHRNA3-205ENST00000559080 KPNA6O60684 536 aa13.13□□□□□ -0.31
CHRNA3-205ENST00000559080 ARIH2O95376 493 aa13.13□□□□□ -0.31
CHRNA3-205ENST00000559080 GJB5O95377 273 aa13.13□□□□□ -0.31
CHRNA3-205ENST00000559080 CXCL10P02778 98 aa13.13□□□□□ -0.31
CHRNA3-205ENST00000559080 SLC16A2P36021 539 aa13.13□□□□□ -0.31
CHRNA3-205ENST00000559080 KCNJ6P48051 423 aa13.13□□□□□ -0.31
CHRNA3-205ENST00000559080 PPP2R5BQ15173 497 aa13.13□□□□□ -0.31
CHRNA3-205ENST00000559080 PTGISQ16647 500 aa13.13□□□□□ -0.31
CHRNA3-205ENST00000559080 GDF6Q6KF10 455 aaPredicted RBP13.13□□□□□ -0.31
CHRNA3-205ENST00000559080 BTNL9Q6UXG8 535 aa13.13□□□□□ -0.31
CHRNA3-205ENST00000559080 IQCA1Q86XH1 822 aa13.13□□□□□ -0.31
CHRNA3-205ENST00000559080 CAGE1Q8TC20 777 aa13.13□□□□□ -0.31
CHRNA3-205ENST00000559080 AFAP1L1Q8TED9 768 aa13.13□□□□□ -0.31
CHRNA3-205ENST00000559080 CLEC4DQ8WXI8 215 aa13.13□□□□□ -0.31
CHRNA3-205ENST00000559080 DHX38Q92620 1227 aaKnown RBP13.13□□□□□ -0.31
CHRNA3-205ENST00000559080 TMEM47Q9BQJ4 181 aa13.13□□□□□ -0.31
CHRNA3-205ENST00000559080 PTPDC1A2A3K4 754 aa13.12□□□□□ -0.31
CHRNA3-205ENST00000559080 LINC01553A4QN01 128 aa13.12□□□□□ -0.31
CHRNA3-205ENST00000559080 NBNO60934 754 aa13.12□□□□□ -0.31
CHRNA3-205ENST00000559080 RBL2Q08999 1139 aa13.12□□□□□ -0.31
CHRNA3-205ENST00000559080 BRDTQ58F21 947 aaPredicted RBP13.12□□□□□ -0.31
CHRNA3-205ENST00000559080 SESTD1Q86VW0 696 aa13.12□□□□□ -0.31
CHRNA3-205ENST00000559080 SCFD2Q8WU76 684 aa13.12□□□□□ -0.31
CHRNA3-205ENST00000559080 TTC14Q96N46 770 aa13.12□□□□□ -0.31
CHRNA3-205ENST00000559080 TGS1Q96RS0 853 aaKnown RBP13.12□□□□□ -0.31
CHRNA3-205ENST00000559080 MTUS1Q9ULD2 1270 aa13.12□□□□□ -0.31
CHRNA3-205ENST00000559080 FRMPD2Q68DX3 1309 aaPredicted RBP13.12□□□□□ -0.31
CHRNA3-205ENST00000559080 KDM4AO75164 1064 aa13.11□□□□□ -0.31
CHRNA3-205ENST00000559080 KCNA5P22460 613 aa13.11□□□□□ -0.31
CHRNA3-205ENST00000559080 CALML3P27482 149 aa13.11□□□□□ -0.31
CHRNA3-205ENST00000559080 MRE11P49959 708 aa13.11□□□□□ -0.31
CHRNA3-205ENST00000559080 RPS6P62753 249 aaKnown RBP13.11□□□□□ -0.31
CHRNA3-205ENST00000559080 CCDC178Q5BJE1 867 aa13.11□□□□□ -0.31
CHRNA3-205ENST00000559080 CCDC62Q6P9F0 684 aa13.11□□□□□ -0.31
CHRNA3-205ENST00000559080 CNKSR3Q6P9H4 555 aa13.11□□□□□ -0.31
CHRNA3-205ENST00000559080 RNF207Q6ZRF8 634 aa13.11□□□□□ -0.31
CHRNA3-205ENST00000559080 LRRC8DQ7L1W4 858 aa13.11□□□□□ -0.31
CHRNA3-205ENST00000559080 KAT2BQ92831 832 aa13.11□□□□□ -0.31
CHRNA3-205ENST00000559080 RAD9AQ99638 391 aa13.11□□□□□ -0.31
CHRNA3-205ENST00000559080 ZBED2Q9BTP6 218 aa13.11□□□□□ -0.31
CHRNA3-205ENST00000559080 CNNM2Q9H8M5 875 aa13.11□□□□□ -0.31
CHRNA3-205ENST00000559080 NOD1Q9Y239 953 aa13.11□□□□□ -0.31
CHRNA3-205ENST00000559080 TECTAO75443 2155 aa13.11□□□□□ -0.31
CHRNA3-205ENST00000559080 KAT6AQ92794 2004 aa13.1□□□□□ -0.31
CHRNA3-205ENST00000559080 POTEB3A0JP26 581 aa13.1□□□□□ -0.31
CHRNA3-205ENST00000559080 GRXCR2A6NFK2 248 aa13.1□□□□□ -0.31
CHRNA3-205ENST00000559080 B4E1Z4 1266 aa13.1□□□□□ -0.31
CHRNA3-205ENST00000559080 MMP3P08254 477 aa13.1□□□□□ -0.31
CHRNA3-205ENST00000559080 TXNP10599 105 aaKnown RBP13.1□□□□□ -0.31
CHRNA3-205ENST00000559080 PDHBP11177 359 aa13.1□□□□□ -0.31
CHRNA3-205ENST00000559080 CKBP12277 381 aa13.1□□□□□ -0.31
CHRNA3-205ENST00000559080 SELPP16109 830 aa13.1□□□□□ -0.31
CHRNA3-205ENST00000559080 NHLH1Q02575 133 aa13.1□□□□□ -0.31
CHRNA3-205ENST00000559080 PDE4DQ08499 809 aa13.1□□□□□ -0.31
CHRNA3-205ENST00000559080 SYDE2Q5VT97 1194 aa13.1□□□□□ -0.31
CHRNA3-205ENST00000559080 TRAF7Q6Q0C0 670 aa13.1□□□□□ -0.31
CHRNA3-205ENST00000559080 POTEBQ6S5H4 581 aa13.1□□□□□ -0.31
CHRNA3-205ENST00000559080 DNERQ8NFT8 737 aa13.1□□□□□ -0.31
CHRNA3-205ENST00000559080 NEK9Q8TD19 979 aa13.1□□□□□ -0.31
CHRNA3-205ENST00000559080 ZKSCAN3Q9BRR0 538 aa13.1□□□□□ -0.31
CHRNA3-205ENST00000559080 KRT23Q9C075 422 aa13.1□□□□□ -0.31
CHRNA3-205ENST00000559080 IL25Q9H293 177 aa13.1□□□□□ -0.31
CHRNA3-205ENST00000559080 KAT14Q9H8E8 782 aa13.1□□□□□ -0.31
CHRNA3-205ENST00000559080 GPCPD1Q9NPB8 672 aa13.1□□□□□ -0.31
CHRNA3-205ENST00000559080 DOCK5Q9H7D0 1870 aa13.1□□□□□ -0.31
CHRNA3-205ENST00000559080 ABHD14A-ACY1A0A1B0GW23 586 aa13.09□□□□□ -0.31
CHRNA3-205ENST00000559080 PARNO95453 639 aaKnown RBP13.09□□□□□ -0.31
CHRNA3-205ENST00000559080 ALADP13716 330 aa13.09□□□□□ -0.31
CHRNA3-205ENST00000559080 CHMLP26374 656 aa13.09□□□□□ -0.31
CHRNA3-205ENST00000559080 ZNF543Q08ER8 600 aa13.09□□□□□ -0.31
CHRNA3-205ENST00000559080 MKRN4PQ13434 485 aaPredicted RBP13.09□□□□□ -0.31
CHRNA3-205ENST00000559080 MBTPS1Q14703 1052 aa13.09□□□□□ -0.31
CHRNA3-205ENST00000559080 PTCRAQ6ISU1 281 aaPredicted RBP13.09□□□□□ -0.31
CHRNA3-205ENST00000559080 DGKHQ86XP1 1220 aa13.09□□□□□ -0.31
CHRNA3-205ENST00000559080 CCDC155Q8N6L0 562 aa13.09□□□□□ -0.31
CHRNA3-205ENST00000559080 AFG1LQ8WV93 481 aa13.09□□□□□ -0.31
CHRNA3-205ENST00000559080 FBXL18Q96ME1 805 aa13.09□□□□□ -0.31
CHRNA3-205ENST00000559080 C17orf80Q9BSJ5 609 aa13.09□□□□□ -0.31
CHRNA3-205ENST00000559080 UBAC1Q9BSL1 405 aa13.09□□□□□ -0.31
CHRNA3-205ENST00000559080 GTF2IRD1Q9UHL9 959 aa13.09□□□□□ -0.31
CHRNA3-205ENST00000559080 WDFY4Q6ZS81 3184 aa13.09□□□□□ -0.31
CHRNA3-205ENST00000559080 SSTR3P32745 418 aaPredicted RBP13.08□□□□□ -0.32
CHRNA3-205ENST00000559080 CHMP4BP1P59074 171 aa13.08□□□□□ -0.32
CHRNA3-205ENST00000559080 ARHGAP1Q07960 439 aa13.08□□□□□ -0.32
CHRNA3-205ENST00000559080 TRDNQ13061 729 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms