RNA–Protein interactions for RNA: ENST00000558903.1

CHRNA3-203, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-203ENST00000558903 CLK2P49760 499 aaKnown RBP6.72□□□□□ -1.33
CHRNA3-203ENST00000558903 RPS6P62753 249 aaKnown RBP6.72□□□□□ -1.33
CHRNA3-203ENST00000558903 CACNB2Q08289 660 aaPredicted RBP6.72□□□□□ -1.33
CHRNA3-203ENST00000558903 SSRP1Q08945 709 aaKnown RBP6.72□□□□□ -1.33
CHRNA3-203ENST00000558903 TRIM32Q13049 653 aa6.72□□□□□ -1.33
CHRNA3-203ENST00000558903 MTFR1Q15390 333 aa6.72□□□□□ -1.33
CHRNA3-203ENST00000558903 MYSM1Q5VVJ2 828 aa6.72□□□□□ -1.33
CHRNA3-203ENST00000558903 POTEEQ6S8J3 1075 aa6.72□□□□□ -1.33
CHRNA3-203ENST00000558903 ARMCX2Q7L311 632 aa6.72□□□□□ -1.33
CHRNA3-203ENST00000558903 MSL3Q8N5Y2 521 aaKnown RBP6.72□□□□□ -1.33
CHRNA3-203ENST00000558903 ZNF713Q8N859 430 aaPredicted RBP6.72□□□□□ -1.33
CHRNA3-203ENST00000558903 CCDC148Q8NFR7 591 aa6.72□□□□□ -1.33
CHRNA3-203ENST00000558903 GPKOWQ92917 476 aaPredicted RBP eCLIP6.72□□□□□ -1.33
CHRNA3-203ENST00000558903 MARVELD3Q96A59 401 aa6.72□□□□□ -1.33
CHRNA3-203ENST00000558903 HS3ST6Q96QI5 342 aa6.72□□□□□ -1.33
CHRNA3-203ENST00000558903 SLC26A6Q9BXS9 759 aa6.72□□□□□ -1.33
CHRNA3-203ENST00000558903 RIOX1Q9H6W3 641 aa6.72□□□□□ -1.33
CHRNA3-203ENST00000558903 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.72□□□□□ -1.33
CHRNA3-203ENST00000558903 BRPF3Q9ULD4 1205 aa6.72□□□□□ -1.33
CHRNA3-203ENST00000558903 SYNGAP1Q96PV0 1343 aa6.72□□□□□ -1.33
CHRNA3-203ENST00000558903 NID2Q14112 1375 aa6.71□□□□□ -1.33
CHRNA3-203ENST00000558903 hCG_1642624A0A1W2PR95 340 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 SMAPO00193 183 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 GJB1P08034 283 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 MYCLP12524 364 aaPredicted RBP6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 AKR1A1P14550 325 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 CAPN2P17655 700 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 EIF2AK2P19525 551 aaKnown RBP6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 CCND3P30281 292 aaPredicted RBP6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 ALDH5A1P51649 535 aaPredicted RBP6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 ADCY7P51828 1080 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 AK2P54819 239 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 CNTN2Q02246 1040 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 TRIM29Q14134 588 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 RABEP1Q15276 862 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 ZNF792Q3KQV3 632 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 DMRTA1Q5VZB9 504 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 PPP1R18Q6NYC8 613 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 EEPD1Q7L9B9 569 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 FCHSD1Q86WN1 690 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 SRBD1Q8N5C6 995 aaKnown RBP6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 SAMD3Q8N6K7 520 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 RDH13Q8NBN7 331 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 DNERQ8NFT8 737 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 NSUN6Q8TEA1 469 aaKnown RBP6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 U2AF1L4Q8WU68 220 aaKnown RBP6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 WASF1Q92558 559 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 USP6NLQ92738 828 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 ZNF274Q96GC6 653 aaPredicted RBP6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 RMDN3Q96TC7 470 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 MAF1Q9H063 256 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 AP5M1Q9H0R1 490 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 ABHD16BQ9H3Z7 469 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 C6orf50Q9HD87 102 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 XPNPEP3Q9NQH7 507 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 FLRT1Q9NZU1 646 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 DDX20Q9UHI6 824 aaKnown RBP6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 NRBP1Q9UHY1 535 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 FAM184BQ9ULE4 1060 aa6.71□□□□□ -1.34
CHRNA3-203ENST00000558903 DNAJC25-GNG10A0A024R161 153 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 LOC102724159A0A0B4J2E5 919 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 C3orf80F5H4A9 247 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 SEPT4O43236 478 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 CYTH3O43739 400 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 FARP2O94887 1054 aaPredicted RBP6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 SGPL1O95470 568 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 CYBAP13498 195 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 SCG2P13521 617 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 PDIA3P30101 505 aaKnown RBP6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 CDC27P30260 824 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 CCND2P30279 289 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 HOXA13P31271 388 aaPredicted RBP6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 ADD1P35611 737 aaKnown RBP6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 GJA8P48165 433 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 ACVR2BQ13705 512 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 COL9A3Q14050 684 aaPredicted RBP6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 TOB2Q14106 344 aaPredicted RBP6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 PWP2Q15269 919 aaKnown RBP6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 GNPTABQ3T906 1256 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 BRDTQ58F21 947 aaPredicted RBP6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 PRAMEF19Q5SWL8 479 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 IFFO2Q5TF58 517 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 ANO1Q5XXA6 986 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 RNF180Q86T96 592 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 FBXO16Q8IX29 292 aaPredicted RBP6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 FBXL16Q8N461 479 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 FAM133AQ8N9E0 248 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 ARRDC4Q8NCT1 418 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 RGS22Q8NE09 1264 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 BICD2Q8TD16 824 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 SPIRE2Q8WWL2 714 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 CLEC4DQ8WXI8 215 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 PHKBQ93100 1093 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 HTATIP2Q9BUP3 242 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 RNF26Q9BY78 433 aaPredicted RBP6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 GLT8D2Q9H1C3 349 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 PSTPIP2Q9H939 334 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 NCOA5Q9HCD5 579 aaKnown RBP6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 BRMS1Q9HCU9 246 aa6.7□□□□□ -1.34
CHRNA3-203ENST00000558903 VTA1Q9NP79 307 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms